RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 TVP23CQ96ET8 276 aa6.57□□□□□ -1.36
RIF1-208ENST00000457745 SMIM7Q9BQ49 75 aa6.57□□□□□ -1.36
RIF1-208ENST00000457745 SDF2L1Q9HCN8 221 aa6.57□□□□□ -1.36
RIF1-208ENST00000457745 DAZ1Q9NQZ3 744 aaKnown RBP6.57□□□□□ -1.36
RIF1-208ENST00000457745 OTORQ9NRC9 128 aa6.57□□□□□ -1.36
RIF1-208ENST00000457745 EPDR1Q9UM22 224 aa6.57□□□□□ -1.36
RIF1-208ENST00000457745 ARL2-SNX15V9GYD0 113 aa6.57□□□□□ -1.36
RIF1-208ENST00000457745 F6UB75 175 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 F6UZH7 168 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 CCL24O00175 119 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 SCGB2A1O75556 95 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 ZNF705DP0CH99 300 aaPredicted RBP6.56□□□□□ -1.36
RIF1-208ENST00000457745 ZNF705BP0CI00 300 aaPredicted RBP6.56□□□□□ -1.36
RIF1-208ENST00000457745 FOLR2P14207 255 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 CBLN1P23435 193 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 ERCC8Q13216 396 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 FAM106AQ4KMX7 169 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 CENPWQ5EE01 88 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 C1orf194Q5T5A4 169 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 LINC00322Q6ZN03 302 aaPredicted RBP6.56□□□□□ -1.36
RIF1-208ENST00000457745 Q6ZQT7 251 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 GOLT1AQ6ZVE7 132 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 CBLN2Q8IUK8 224 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 STXBP6Q8NFX7 210 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 OCC1Q8TAD7 63 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 Q8TAT8 98 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 VGLL1Q99990 258 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 GPR61Q9BZJ8 451 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 SMDT1Q9H4I9 107 aa6.56□□□□□ -1.36
RIF1-208ENST00000457745 TSSC4Q9Y5U2 329 aaPredicted RBP6.56□□□□□ -1.36
RIF1-208ENST00000457745 AGRNO00468 2067 aa6.55□□□□□ -1.36
RIF1-208ENST00000457745 C7orf77A4D0Y5 90 aa6.55□□□□□ -1.36
RIF1-208ENST00000457745 DIRC3C9JPN6 131 aa6.55□□□□□ -1.36
RIF1-208ENST00000457745 PDE6DO43924 150 aa6.55□□□□□ -1.36
RIF1-208ENST00000457745 ATF4P18848 351 aaPredicted RBP6.55□□□□□ -1.36
RIF1-208ENST00000457745 TFPI2P48307 235 aa6.55□□□□□ -1.36
RIF1-208ENST00000457745 OR5I1Q13606 314 aa6.55□□□□□ -1.36
RIF1-208ENST00000457745 TMEM88Q6PEY1 159 aa6.55□□□□□ -1.36
RIF1-208ENST00000457745 Q86TA4 180 aa6.55□□□□□ -1.36
RIF1-208ENST00000457745 LINC01551Q86U37 167 aa6.55□□□□□ -1.36
RIF1-208ENST00000457745 WFDC3Q8IUB2 231 aa6.55□□□□□ -1.36
RIF1-208ENST00000457745 C5orf17Q8NAS9 161 aa6.55□□□□□ -1.36
RIF1-208ENST00000457745 OR9G4Q8NGQ1 327 aa6.55□□□□□ -1.36
RIF1-208ENST00000457745 DCANP1Q8TF63 244 aa6.55□□□□□ -1.36
RIF1-208ENST00000457745 UFC1Q9Y3C8 167 aa6.55□□□□□ -1.36
RIF1-208ENST00000457745 NDUFS6O75380 124 aaKnown RBP6.54□□□□□ -1.36
RIF1-208ENST00000457745 GALR1P47211 349 aa6.54□□□□□ -1.36
RIF1-208ENST00000457745 ADIRFQ15847 76 aa6.54□□□□□ -1.36
RIF1-208ENST00000457745 ZNF124Q15973 351 aa6.54□□□□□ -1.36
RIF1-208ENST00000457745 PRR9Q5T870 116 aa6.54□□□□□ -1.36
RIF1-208ENST00000457745 GDF5OSQ5U4N7 250 aa6.54□□□□□ -1.36
RIF1-208ENST00000457745 TMEM61Q8N0U2 210 aa6.54□□□□□ -1.36
RIF1-208ENST00000457745 DPF1Q92782 380 aa6.54□□□□□ -1.36
RIF1-208ENST00000457745 C8orf49Q96NF6 230 aa6.54□□□□□ -1.36
RIF1-208ENST00000457745 YPEL4Q96NS1 127 aa6.54□□□□□ -1.36
RIF1-208ENST00000457745 CITED1Q99966 193 aa6.54□□□□□ -1.36
RIF1-208ENST00000457745 KRTAP4-12Q9BQ66 201 aa6.54□□□□□ -1.36
RIF1-208ENST00000457745 NKX6-2Q9C056 277 aaPredicted RBP6.54□□□□□ -1.36
RIF1-208ENST00000457745 KLF12Q9Y4X4 402 aa6.54□□□□□ -1.36
RIF1-208ENST00000457745 SORL1Q92673 2214 aa6.54□□□□□ -1.36
RIF1-208ENST00000457745 FBN1P35555 2871 aaKnown RBP6.53□□□□□ -1.36
RIF1-208ENST00000457745 K7EQG2 157 aa6.53□□□□□ -1.36
RIF1-208ENST00000457745 M0R036 132 aa6.53□□□□□ -1.36
RIF1-208ENST00000457745 ZNF253O75346 499 aa6.53□□□□□ -1.36
RIF1-208ENST00000457745 TAGLN2P37802 199 aaKnown RBP6.53□□□□□ -1.36
RIF1-208ENST00000457745 BTN1A1Q13410 526 aa6.53□□□□□ -1.36
RIF1-208ENST00000457745 PDE6HQ13956 83 aa6.53□□□□□ -1.36
RIF1-208ENST00000457745 KIR3DS1Q14943 382 aa6.53□□□□□ -1.36
RIF1-208ENST00000457745 TMEM183BQ1AE95 376 aa6.53□□□□□ -1.36
RIF1-208ENST00000457745 TMEM241Q24JQ0 296 aa6.53□□□□□ -1.36
RIF1-208ENST00000457745 LCN12Q6JVE5 192 aa6.53□□□□□ -1.36
RIF1-208ENST00000457745 LINC00482Q8N8I6 264 aa6.53□□□□□ -1.36
RIF1-208ENST00000457745 ISOC2Q96AB3 205 aa6.53□□□□□ -1.36
RIF1-208ENST00000457745 ATG101Q9BSB4 218 aa6.53□□□□□ -1.36
RIF1-208ENST00000457745 MS4A6AQ9H2W1 248 aa6.53□□□□□ -1.36
RIF1-208ENST00000457745 NAT8Q9UHE5 227 aa6.53□□□□□ -1.36
RIF1-208ENST00000457745 ATRQ13535 2644 aa6.53□□□□□ -1.36
RIF1-208ENST00000457745 HELTA6NFD8 242 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 C9JCJ5 164 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 OVOL1O14753 267 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 CRIP1P50238 77 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 ZNF80P51504 273 aaPredicted RBP6.52□□□□□ -1.37
RIF1-208ENST00000457745 PSG3Q16557 428 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 DEFB114Q30KQ6 69 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 RNF212Q495C1 297 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 CD300EQ496F6 205 aaPredicted RBP6.52□□□□□ -1.37
RIF1-208ENST00000457745 PRNTQ86SH4 94 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 ZNF575Q86XF7 245 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 NDUFA11Q86Y39 141 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 SVBPQ8N300 66 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 ZC2HC1AQ96GY0 325 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 GPR82Q96P67 336 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 TXNDC17Q9BRA2 123 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 MLST8Q9BVC4 326 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 AGPAT4-IT1Q9H0P7 198 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 NRN1Q9NPD7 142 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 PSG8Q9UQ74 426 aa6.52□□□□□ -1.37
RIF1-208ENST00000457745 NIPBLQ6KC79 2804 aaeCLIP6.51□□□□□ -1.37
RIF1-208ENST00000457745 RBMY1BA6NDE4 496 aaKnown RBP6.51□□□□□ -1.37
RIF1-208ENST00000457745 RBMY1EA6NEQ0 496 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms