RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 MORN3Q6PF18 240 aaPredicted RBP15.14■□□□□ 0.01
FAM3A-217ENST00000457212 SBSPONQ8IVN8 264 aa15.14■□□□□ 0.01
FAM3A-217ENST00000457212 FAM213BQ8TBF2 198 aa15.14■□□□□ 0.01
FAM3A-217ENST00000457212 MAP1LC3BQ9GZQ8 125 aa15.14■□□□□ 0.01
FAM3A-217ENST00000457212 F6UB75 175 aa15.13■□□□□ 0.01
FAM3A-217ENST00000457212 NHLRC4P0CG21 123 aaPredicted RBP15.13■□□□□ 0.01
FAM3A-217ENST00000457212 FHITP49789 147 aa15.13■□□□□ 0.01
FAM3A-217ENST00000457212 SULT1A2P50226 295 aa15.13■□□□□ 0.01
FAM3A-217ENST00000457212 DEFB1P60022 68 aa15.13■□□□□ 0.01
FAM3A-217ENST00000457212 RANP62826 216 aaKnown RBP15.13■□□□□ 0.01
FAM3A-217ENST00000457212 ICAM4Q14773 271 aa15.13■□□□□ 0.01
FAM3A-217ENST00000457212 GDF5OSQ5U4N7 250 aa15.13■□□□□ 0.01
FAM3A-217ENST00000457212 EXOC3-AS1Q8N2X6 119 aa15.13■□□□□ 0.01
FAM3A-217ENST00000457212 OR8A1Q8NGG7 326 aa15.13■□□□□ 0.01
FAM3A-217ENST00000457212 MBD3L1Q8WWY6 194 aa15.13■□□□□ 0.01
FAM3A-217ENST00000457212 CSTL1Q9H114 145 aa15.13■□□□□ 0.01
FAM3A-217ENST00000457212 AGRNO00468 2067 aa15.13■□□□□ 0.01
FAM3A-217ENST00000457212 PRKDCP78527 4128 aaKnown RBP15.13■□□□□ 0.01
FAM3A-217ENST00000457212 FAM74A1Q5RGS3 127 aa15.12■□□□□ 0.01
FAM3A-217ENST00000457212 ASCL2Q99929 193 aa15.12■□□□□ 0.01
FAM3A-217ENST00000457212 Q9H3A6 140 aa15.12■□□□□ 0.01
FAM3A-217ENST00000457212 BOLA1Q9Y3E2 137 aa15.12■□□□□ 0.01
FAM3A-217ENST00000457212 ZNF705FA8MVS1 300 aaPredicted RBP15.11■□□□□ 0.01
FAM3A-217ENST00000457212 NUTF2P61970 127 aaKnown RBP15.11■□□□□ 0.01
FAM3A-217ENST00000457212 IQCF2Q8IXL9 164 aa15.11■□□□□ 0.01
FAM3A-217ENST00000457212 OR4B1Q8NGF8 309 aa15.11■□□□□ 0.01
FAM3A-217ENST00000457212 OTORQ9NRC9 128 aa15.11■□□□□ 0.01
FAM3A-217ENST00000457212 A8MTW9 85 aa15.1■□□□□ 0.01
FAM3A-217ENST00000457212 BOLA2-SMG1P6H3BVE0 249 aa15.1■□□□□ 0.01
FAM3A-217ENST00000457212 M0R3E3 92 aa15.1■□□□□ 0.01
FAM3A-217ENST00000457212 H2AFB1P0C5Y9 115 aa15.1■□□□□ 0.01
FAM3A-217ENST00000457212 CNN1P51911 297 aaKnown RBP15.1■□□□□ 0.01
FAM3A-217ENST00000457212 HIST1H1AQ02539 215 aaPredicted RBP15.1■□□□□ 0.01
FAM3A-217ENST00000457212 OR10J6PQ8NGY7 276 aa15.1■□□□□ 0.01
FAM3A-217ENST00000457212 SFT2D1Q8WV19 159 aa15.1■□□□□ 0.01
FAM3A-217ENST00000457212 TM2D3Q9BRN9 247 aa15.1■□□□□ 0.01
FAM3A-217ENST00000457212 CSN1S1P47710 185 aa15.09■□□□□ 0.01
FAM3A-217ENST00000457212 FGF8P55075 233 aaPredicted RBP15.09■□□□□ 0.01
FAM3A-217ENST00000457212 Q6ZWC4 215 aa15.09■□□□□ 0.01
FAM3A-217ENST00000457212 ARL6IP6Q8N6S5 226 aa15.09■□□□□ 0.01
FAM3A-217ENST00000457212 RXFP4Q8TDU9 374 aa15.09■□□□□ 0.01
FAM3A-217ENST00000457212 SPATA25Q9BR10 227 aa15.09■□□□□ 0.01
FAM3A-217ENST00000457212 PRAC2D3DTV9 90 aa15.08■□□□□ 0
FAM3A-217ENST00000457212 C1QTNF4Q9BXJ3 329 aa15.08■□□□□ 0
FAM3A-217ENST00000457212 ZMAT4Q9H898 229 aa15.08■□□□□ 0
FAM3A-217ENST00000457212 A0A1W2PRE2 83 aa15.07■□□□□ 0
FAM3A-217ENST00000457212 PGPA6NDG6 321 aa15.07■□□□□ 0
FAM3A-217ENST00000457212 CA1P00915 261 aaPredicted RBP15.07■□□□□ 0
FAM3A-217ENST00000457212 IGKV3-20P01619 116 aa15.07■□□□□ 0
FAM3A-217ENST00000457212 ZNF705DP0CH99 300 aaPredicted RBP15.07■□□□□ 0
FAM3A-217ENST00000457212 ZNF705BP0CI00 300 aaPredicted RBP15.07■□□□□ 0
FAM3A-217ENST00000457212 CMTM2Q8TAZ6 248 aa15.07■□□□□ 0
FAM3A-217ENST00000457212 TMPRSS5Q9H3S3 457 aa15.07■□□□□ 0
FAM3A-217ENST00000457212 TRAV1-1A0A0B4J248 108 aa15.06■□□□□ 0
FAM3A-217ENST00000457212 NPIPB6E9PJ23 425 aa15.06■□□□□ 0
FAM3A-217ENST00000457212 TEX46H3BTG2 121 aa15.06■□□□□ 0
FAM3A-217ENST00000457212 AMTNQ6UX39 209 aa15.06■□□□□ 0
FAM3A-217ENST00000457212 ALKAL2Q6UX46 152 aa15.06■□□□□ 0
FAM3A-217ENST00000457212 NKX6-2Q9C056 277 aaPredicted RBP15.06■□□□□ 0
FAM3A-217ENST00000457212 TP53TG1Q9Y2A0 90 aa15.06■□□□□ 0
FAM3A-217ENST00000457212 HBE1P02100 147 aa15.05■□□□□ -0
FAM3A-217ENST00000457212 AMBPP02760 352 aa15.05■□□□□ -0
FAM3A-217ENST00000457212 PPT1P50897 306 aa15.05■□□□□ -0
FAM3A-217ENST00000457212 PPP1R14DQ9NXH3 145 aa15.05■□□□□ -0
FAM3A-217ENST00000457212 ARL2-SNX15V9GYD0 113 aa15.05■□□□□ -0
FAM3A-217ENST00000457212 RBAKDNA6NC62 111 aa15.04■□□□□ -0
FAM3A-217ENST00000457212 SLC25A5P05141 298 aaKnown RBP15.04■□□□□ -0
FAM3A-217ENST00000457212 GIG44P09565 113 aaPredicted RBP15.04■□□□□ -0
FAM3A-217ENST00000457212 C5orf17Q8NAS9 161 aa15.04■□□□□ -0
FAM3A-217ENST00000457212 RNF183Q96D59 192 aa15.04■□□□□ -0
FAM3A-217ENST00000457212 LINC00477Q96M19 166 aa15.04■□□□□ -0
FAM3A-217ENST00000457212 ZNF705EA8MWA4 302 aaPredicted RBP15.03■□□□□ -0
FAM3A-217ENST00000457212 DIRC3C9JPN6 131 aa15.03■□□□□ -0
FAM3A-217ENST00000457212 DEFB135Q30KP9 77 aa15.03■□□□□ -0
FAM3A-217ENST00000457212 C9orf47Q6ZRZ4 202 aa15.03■□□□□ -0
FAM3A-217ENST00000457212 RCHY1Q96PM5 261 aa15.03■□□□□ -0
FAM3A-217ENST00000457212 ODF3Q96PU9 254 aa15.03■□□□□ -0
FAM3A-217ENST00000457212 SLC35B3Q9H1N7 401 aa15.03■□□□□ -0
FAM3A-217ENST00000457212 SERTM2A0A1B0GWG4 89 aa15.02■□□□□ -0
FAM3A-217ENST00000457212 GGTLC3B5MD39 225 aa15.02■□□□□ -0
FAM3A-217ENST00000457212 SPRY2O43597 315 aa15.02■□□□□ -0
FAM3A-217ENST00000457212 PRB4P10163 310 aaPredicted RBP15.02■□□□□ -0
FAM3A-217ENST00000457212 UBE2G2P60604 165 aa15.02■□□□□ -0
FAM3A-217ENST00000457212 SUMO1P63165 101 aaKnown RBP15.02■□□□□ -0
FAM3A-217ENST00000457212 YTHDF2Q9Y5A9 579 aaKnown RBP15.02■□□□□ -0
FAM3A-217ENST00000457212 NBEAL2Q6ZNJ1 2754 aa15.02□□□□□ -0.01
FAM3A-217ENST00000457212 IGKV2-40A0A087WW87 121 aaPredicted RBP15.01□□□□□ -0.01
FAM3A-217ENST00000457212 A0A1B0GV50 99 aa15.01□□□□□ -0.01
FAM3A-217ENST00000457212 FAM74A7A6NL05 159 aa15.01□□□□□ -0.01
FAM3A-217ENST00000457212 IGKV2D-40P01614 121 aaPredicted RBP15.01□□□□□ -0.01
FAM3A-217ENST00000457212 TSPOP30536 169 aa15.01□□□□□ -0.01
FAM3A-217ENST00000457212 BLOC1S1P78537 153 aa15.01□□□□□ -0.01
FAM3A-217ENST00000457212 TMEM78Q5T7P6 136 aa15.01□□□□□ -0.01
FAM3A-217ENST00000457212 OVOL2Q9BRP0 275 aa15.01□□□□□ -0.01
FAM3A-217ENST00000457212 AGPAT4-IT1Q9H0P7 198 aa15.01□□□□□ -0.01
FAM3A-217ENST00000457212 XCL2Q9UBD3 114 aa15.01□□□□□ -0.01
FAM3A-217ENST00000457212 CT45A10P0DMU9 189 aa15□□□□□ -0.01
FAM3A-217ENST00000457212 FXYD7P58549 80 aa15□□□□□ -0.01
FAM3A-217ENST00000457212 ERCC8Q13216 396 aa15□□□□□ -0.01
FAM3A-217ENST00000457212 CSNK1G2-AS1Q8NCQ2 148 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms