RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 MRPL53Q96EL3 112 aaKnown RBP10.34□□□□□ -0.75
SMPD4-215ENST00000457039 PHYHIPLQ96FC7 376 aa10.34□□□□□ -0.75
SMPD4-215ENST00000457039 RCHY1Q96PM5 261 aa10.34□□□□□ -0.75
SMPD4-215ENST00000457039 ACTR3CQ9C0K3 210 aaPredicted RBP10.34□□□□□ -0.75
SMPD4-215ENST00000457039 U3KQK5 164 aa10.34□□□□□ -0.75
SMPD4-215ENST00000457039 PRAC2D3DTV9 90 aa10.33□□□□□ -0.76
SMPD4-215ENST00000457039 CA1P00915 261 aaPredicted RBP10.33□□□□□ -0.76
SMPD4-215ENST00000457039 ARL14EPLP0DKL9 152 aa10.33□□□□□ -0.76
SMPD4-215ENST00000457039 TPT1P13693 172 aaKnown RBP10.33□□□□□ -0.76
SMPD4-215ENST00000457039 CNN1P51911 297 aaKnown RBP10.33□□□□□ -0.76
SMPD4-215ENST00000457039 EIF5AP63241 154 aaKnown RBP10.33□□□□□ -0.76
SMPD4-215ENST00000457039 DEFB135Q30KP9 77 aa10.33□□□□□ -0.76
SMPD4-215ENST00000457039 AKR1C8PQ5T2L2 129 aa10.33□□□□□ -0.76
SMPD4-215ENST00000457039 AMTNQ6UX39 209 aa10.33□□□□□ -0.76
SMPD4-215ENST00000457039 EXOC3-AS1Q8N2X6 119 aa10.33□□□□□ -0.76
SMPD4-215ENST00000457039 OR8A1Q8NGG7 326 aa10.33□□□□□ -0.76
SMPD4-215ENST00000457039 SUN5Q8TC36 379 aa10.33□□□□□ -0.76
SMPD4-215ENST00000457039 RNF183Q96D59 192 aa10.33□□□□□ -0.76
SMPD4-215ENST00000457039 OVOL2Q9BRP0 275 aa10.33□□□□□ -0.76
SMPD4-215ENST00000457039 TP53TG1Q9Y2A0 90 aa10.33□□□□□ -0.76
SMPD4-215ENST00000457039 CTXND1A0A1B0GTU2 59 aa10.32□□□□□ -0.76
SMPD4-215ENST00000457039 M0R3E3 92 aa10.32□□□□□ -0.76
SMPD4-215ENST00000457039 DUSP14O95147 198 aaKnown RBP10.32□□□□□ -0.76
SMPD4-215ENST00000457039 ZNF705DP0CH99 300 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-215ENST00000457039 ZNF705BP0CI00 300 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-215ENST00000457039 PRB4P10163 310 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-215ENST00000457039 LYPD1Q8N2G4 141 aa10.32□□□□□ -0.76
SMPD4-215ENST00000457039 OR4B1Q8NGF8 309 aa10.32□□□□□ -0.76
SMPD4-215ENST00000457039 PRELID1Q9Y255 219 aa10.32□□□□□ -0.76
SMPD4-215ENST00000457039 STAB2Q8WWQ8 2551 aa10.31□□□□□ -0.76
SMPD4-215ENST00000457039 SPRY2O43597 315 aa10.31□□□□□ -0.76
SMPD4-215ENST00000457039 IGKV3-20P01619 116 aa10.31□□□□□ -0.76
SMPD4-215ENST00000457039 GCHFRP30047 84 aa10.31□□□□□ -0.76
SMPD4-215ENST00000457039 ICAM4Q14773 271 aa10.31□□□□□ -0.76
SMPD4-215ENST00000457039 SLC51BQ86UW2 128 aa10.31□□□□□ -0.76
SMPD4-215ENST00000457039 CSNK1G2-AS1Q8NCQ2 148 aa10.31□□□□□ -0.76
SMPD4-215ENST00000457039 SLC35B3Q9H1N7 401 aa10.31□□□□□ -0.76
SMPD4-215ENST00000457039 AAMDCQ9H7C9 122 aa10.31□□□□□ -0.76
SMPD4-215ENST00000457039 DNAH7Q8WXX0 4024 aa10.3□□□□□ -0.76
SMPD4-215ENST00000457039 UMAD1C9J7I0 102 aa10.3□□□□□ -0.76
SMPD4-215ENST00000457039 CXorf1O96002 111 aa10.3□□□□□ -0.76
SMPD4-215ENST00000457039 FHITP49789 147 aa10.3□□□□□ -0.76
SMPD4-215ENST00000457039 NUTF2P61970 127 aaKnown RBP10.3□□□□□ -0.76
SMPD4-215ENST00000457039 RANP62826 216 aaKnown RBP10.3□□□□□ -0.76
SMPD4-215ENST00000457039 HIST1H1AQ02539 215 aaPredicted RBP10.3□□□□□ -0.76
SMPD4-215ENST00000457039 TMED6Q8WW62 240 aa10.3□□□□□ -0.76
SMPD4-215ENST00000457039 Q9H3A6 140 aa10.3□□□□□ -0.76
SMPD4-215ENST00000457039 NKX2-5P52952 324 aaPredicted RBP10.29□□□□□ -0.76
SMPD4-215ENST00000457039 C1QTNF4Q9BXJ3 329 aa10.29□□□□□ -0.76
SMPD4-215ENST00000457039 MAP1LC3B2A6NCE7 125 aa10.28□□□□□ -0.76
SMPD4-215ENST00000457039 NPIPB6E9PJ23 425 aa10.28□□□□□ -0.76
SMPD4-215ENST00000457039 FXYD7P58549 80 aa10.28□□□□□ -0.76
SMPD4-215ENST00000457039 DPPA3Q6W0C5 159 aa10.28□□□□□ -0.76
SMPD4-215ENST00000457039 OR10J6PQ8NGY7 276 aa10.28□□□□□ -0.76
SMPD4-215ENST00000457039 MAP1LC3BQ9GZQ8 125 aa10.28□□□□□ -0.76
SMPD4-215ENST00000457039 OTORQ9NRC9 128 aa10.28□□□□□ -0.76
SMPD4-215ENST00000457039 TMEM167BQ9NRX6 74 aa10.28□□□□□ -0.76
SMPD4-215ENST00000457039 XCL2Q9UBD3 114 aa10.28□□□□□ -0.76
SMPD4-215ENST00000457039 BOLA2-SMG1P6H3BVE0 249 aa10.27□□□□□ -0.77
SMPD4-215ENST00000457039 CRXO43186 299 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-215ENST00000457039 FGF8P55075 233 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-215ENST00000457039 MBD3L1Q8WWY6 194 aa10.27□□□□□ -0.77
SMPD4-215ENST00000457039 TMPRSS5Q9H3S3 457 aa10.27□□□□□ -0.77
SMPD4-215ENST00000457039 EDA2RQ9HAV5 297 aa10.27□□□□□ -0.77
SMPD4-215ENST00000457039 PGPA6NDG6 321 aa10.26□□□□□ -0.77
SMPD4-215ENST00000457039 ZNF705EA8MWA4 302 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-215ENST00000457039 M0R2Z0 102 aa10.26□□□□□ -0.77
SMPD4-215ENST00000457039 SPINK13Q1W4C9 94 aa10.26□□□□□ -0.77
SMPD4-215ENST00000457039 EIF5AL1Q6IS14 154 aaKnown RBP10.26□□□□□ -0.77
SMPD4-215ENST00000457039 ZNF705AQ6ZN79 300 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-215ENST00000457039 C9orf47Q6ZRZ4 202 aa10.26□□□□□ -0.77
SMPD4-215ENST00000457039 FAM213BQ8TBF2 198 aa10.26□□□□□ -0.77
SMPD4-215ENST00000457039 ODF3Q96PU9 254 aa10.26□□□□□ -0.77
SMPD4-215ENST00000457039 RARRES2Q99969 163 aa10.26□□□□□ -0.77
SMPD4-215ENST00000457039 X6R8D5 127 aa10.26□□□□□ -0.77
SMPD4-215ENST00000457039 IGKV2-40A0A087WW87 121 aaPredicted RBP10.25□□□□□ -0.77
SMPD4-215ENST00000457039 A0A1W2PRE2 83 aa10.25□□□□□ -0.77
SMPD4-215ENST00000457039 DIRC3C9JPN6 131 aa10.25□□□□□ -0.77
SMPD4-215ENST00000457039 IGKV2D-40P01614 121 aaPredicted RBP10.25□□□□□ -0.77
SMPD4-215ENST00000457039 AMBPP02760 352 aa10.25□□□□□ -0.77
SMPD4-215ENST00000457039 CT45A10P0DMU9 189 aa10.25□□□□□ -0.77
SMPD4-215ENST00000457039 SULT1A2P50226 295 aa10.25□□□□□ -0.77
SMPD4-215ENST00000457039 RAB5CP51148 216 aa10.25□□□□□ -0.77
SMPD4-215ENST00000457039 ERCC8Q13216 396 aa10.25□□□□□ -0.77
SMPD4-215ENST00000457039 ARL6IP6Q8N6S5 226 aa10.25□□□□□ -0.77
SMPD4-215ENST00000457039 OR11H2Q8NH07 326 aa10.25□□□□□ -0.77
SMPD4-215ENST00000457039 RXFP4Q8TDU9 374 aa10.25□□□□□ -0.77
SMPD4-215ENST00000457039 FAM19A4Q96LR4 140 aa10.25□□□□□ -0.77
SMPD4-215ENST00000457039 IGF2BP2-AS1Q96M15 143 aa10.25□□□□□ -0.77
SMPD4-215ENST00000457039 VGLL1Q99990 258 aa10.25□□□□□ -0.77
SMPD4-215ENST00000457039 AGPAT4-IT1Q9H0P7 198 aa10.25□□□□□ -0.77
SMPD4-215ENST00000457039 BOLA1Q9Y3E2 137 aa10.25□□□□□ -0.77
SMPD4-215ENST00000457039 RBAKDNA6NC62 111 aa10.24□□□□□ -0.77
SMPD4-215ENST00000457039 GGTLC3B5MD39 225 aa10.24□□□□□ -0.77
SMPD4-215ENST00000457039 SLC25A5P05141 298 aaKnown RBP10.24□□□□□ -0.77
SMPD4-215ENST00000457039 CDKN1BP46527 198 aa10.24□□□□□ -0.77
SMPD4-215ENST00000457039 CSN1S1P47710 185 aa10.24□□□□□ -0.77
SMPD4-215ENST00000457039 FAM74A1Q5RGS3 127 aa10.24□□□□□ -0.77
SMPD4-215ENST00000457039 IQCF2Q8IXL9 164 aa10.24□□□□□ -0.77
SMPD4-215ENST00000457039 C1orf158Q8N1D5 194 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms