RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 S100A7AQ86SG5 101 aa7.94□□□□□ -1.14
CHCHD4P3-201ENST00000455954 BOD1L2Q8IYS8 172 aa7.94□□□□□ -1.14
CHCHD4P3-201ENST00000455954 CIARTQ8N365 385 aaPredicted RBP7.94□□□□□ -1.14
CHCHD4P3-201ENST00000455954 NUP37Q8NFH4 326 aa7.94□□□□□ -1.14
CHCHD4P3-201ENST00000455954 TNFRSF14Q92956 283 aa7.94□□□□□ -1.14
CHCHD4P3-201ENST00000455954 CCL13Q99616 98 aa7.94□□□□□ -1.14
CHCHD4P3-201ENST00000455954 TNCP24821 2201 aa7.94□□□□□ -1.14
CHCHD4P3-201ENST00000455954 HIVEP1P15822 2718 aa7.94□□□□□ -1.14
CHCHD4P3-201ENST00000455954 TRAV8-6A0A0B4J262 113 aa7.93□□□□□ -1.14
CHCHD4P3-201ENST00000455954 VSTM5A8MXK1 200 aa7.93□□□□□ -1.14
CHCHD4P3-201ENST00000455954 SMAD7O15105 426 aaKnown RBP7.93□□□□□ -1.14
CHCHD4P3-201ENST00000455954 NDUFS7O75251 213 aa7.93□□□□□ -1.14
CHCHD4P3-201ENST00000455954 TNFRSF1AP19438 455 aa7.93□□□□□ -1.14
CHCHD4P3-201ENST00000455954 RPL27AP46776 148 aaKnown RBP7.93□□□□□ -1.14
CHCHD4P3-201ENST00000455954 SPRNQ5BIV9 151 aa7.93□□□□□ -1.14
CHCHD4P3-201ENST00000455954 FAM216BQ8N7L0 139 aa7.93□□□□□ -1.14
CHCHD4P3-201ENST00000455954 FER1L6-AS1Q8NA97 138 aa7.93□□□□□ -1.14
CHCHD4P3-201ENST00000455954 BLNKQ8WV28 456 aa7.93□□□□□ -1.14
CHCHD4P3-201ENST00000455954 SMR3AQ99954 134 aa7.93□□□□□ -1.14
CHCHD4P3-201ENST00000455954 MRPL36Q9P0J6 103 aaKnown RBP7.93□□□□□ -1.14
CHCHD4P3-201ENST00000455954 ITPR3Q14573 2671 aa7.92□□□□□ -1.14
CHCHD4P3-201ENST00000455954 A0A087X0K7 114 aa7.92□□□□□ -1.14
CHCHD4P3-201ENST00000455954 IGLV2-11P01706 119 aa7.92□□□□□ -1.14
CHCHD4P3-201ENST00000455954 CRYGBP07316 175 aa7.92□□□□□ -1.14
CHCHD4P3-201ENST00000455954 HLA-DRB4P13762 266 aa7.92□□□□□ -1.14
CHCHD4P3-201ENST00000455954 ORM2P19652 201 aa7.92□□□□□ -1.14
CHCHD4P3-201ENST00000455954 COX8CQ7Z4L0 72 aa7.92□□□□□ -1.14
CHCHD4P3-201ENST00000455954 PRSS3P2Q8NHM4 247 aa7.92□□□□□ -1.14
CHCHD4P3-201ENST00000455954 RPH3ALQ9UNE2 315 aa7.92□□□□□ -1.14
CHCHD4P3-201ENST00000455954 F11RQ9Y624 299 aaKnown RBP7.92□□□□□ -1.14
CHCHD4P3-201ENST00000455954 HLA-DRB4X5D2U9 266 aa7.92□□□□□ -1.14
CHCHD4P3-201ENST00000455954 ROS1P08922 2347 aa7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 B9A039 149 aa7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 E7EUB6 86 aa7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 G3V4G9 280 aa7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 LY6G6DO95868 133 aa7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 DSCR9P59020 149 aa7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 SRSF2Q01130 221 aaKnown RBP7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 ADIPOQQ15848 244 aa7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 FAM201AQ5SY85 155 aa7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 DUX4L9Q6RFH8 374 aaPredicted RBP7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 VHLLQ6RSH7 139 aa7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 NEGR1Q7Z3B1 354 aa7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 RNF5Q99942 180 aa7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 SLC25A39Q9BZJ4 359 aaPredicted RBP7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 HIGD1BQ9P298 99 aa7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 CHTOPQ9Y3Y2 248 aaKnown RBP7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 CADP27708 2225 aa7.91□□□□□ -1.14
CHCHD4P3-201ENST00000455954 LINC01546A6NGU7 62 aa7.9□□□□□ -1.14
CHCHD4P3-201ENST00000455954 RNF223E7ERA6 249 aa7.9□□□□□ -1.14
CHCHD4P3-201ENST00000455954 HBDP02042 147 aa7.9□□□□□ -1.14
CHCHD4P3-201ENST00000455954 SCGB1A1P11684 91 aa7.9□□□□□ -1.14
CHCHD4P3-201ENST00000455954 EFNA4P52798 201 aa7.9□□□□□ -1.14
CHCHD4P3-201ENST00000455954 PDE6HQ13956 83 aa7.9□□□□□ -1.14
CHCHD4P3-201ENST00000455954 PLGLAQ15195 96 aa7.9□□□□□ -1.14
CHCHD4P3-201ENST00000455954 PSG3Q16557 428 aa7.9□□□□□ -1.14
CHCHD4P3-201ENST00000455954 MRGPRG-AS1Q2M3A8 158 aa7.9□□□□□ -1.14
CHCHD4P3-201ENST00000455954 C10orf55Q5SWW7 151 aa7.9□□□□□ -1.14
CHCHD4P3-201ENST00000455954 CLEC2AQ6UVW9 174 aa7.9□□□□□ -1.14
CHCHD4P3-201ENST00000455954 Q71RC1 249 aaPredicted RBP7.9□□□□□ -1.14
CHCHD4P3-201ENST00000455954 SRSF12Q8WXF0 261 aaKnown RBP7.9□□□□□ -1.14
CHCHD4P3-201ENST00000455954 MEGF9Q9H1U4 602 aa7.9□□□□□ -1.14
CHCHD4P3-201ENST00000455954 PSG8Q9UQ74 426 aa7.9□□□□□ -1.14
CHCHD4P3-201ENST00000455954 TEP1Q99973 2627 aaKnown RBP7.9□□□□□ -1.15
CHCHD4P3-201ENST00000455954 TRBV19A0A075B6N1 114 aa7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 H3BRN7 92 aa7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 TNFRSF13BO14836 293 aaPredicted RBP7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 NDUFB3O43676 98 aa7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 SLC25A17O43808 307 aa7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 ARMS2P0C7Q2 107 aa7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 DLX6P56179 175 aa7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 TMEM200BQ69YZ2 307 aa7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 GOLT1AQ6ZVE7 132 aa7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 PRNTQ86SH4 94 aa7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 ORMDL3Q8N138 153 aa7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 DEFB108BQ8NET1 73 aa7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 OR2K2Q8NGT1 345 aa7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 SHANK2-AS3Q9BTD1 123 aa7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 KAAG1Q9UBP8 84 aa7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 RABAC1Q9UI14 185 aa7.89□□□□□ -1.15
CHCHD4P3-201ENST00000455954 PPIAL4EA0A075B759 164 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 IGHV4-30-2A0A087WSY4 118 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 A0A096LNJ9 63 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 A0A0G2JLM5 398 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 PPIAL4DF5H284 164 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 PPIAL4FP0DN26 164 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 SLC25A16P16260 332 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 KIR3DS1Q14943 382 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 TMEM155Q4W5P6 130 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 ASPHD1Q5U4P2 390 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 FAM104BQ5XKR9 115 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 SIGLEC15Q6ZMC9 328 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 ADAMTSL5Q6ZMM2 481 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 MAPK1IP1LQ8NDC0 245 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 ZC2HC1AQ96GY0 325 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 ZNF48Q96MX3 618 aaPredicted RBP7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 PRELID3AQ96N28 172 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 RAB1BQ9H0U4 201 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 SIGLEC8Q9NYZ4 499 aa7.88□□□□□ -1.15
CHCHD4P3-201ENST00000455954 ZNRD1Q9P1U0 126 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms