RNA–Protein interactions for RNA: ENST00000455240.1

PTPA-225, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 3

Gene PTPA, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-225	ENST00000455240	GAGE12F	P0CL80	117 aa		11.21	□□□□□ -0.61
PTPA-225	ENST00000455240	GAGE12G	P0CL81	117 aa		11.21	□□□□□ -0.61
PTPA-225	ENST00000455240	GAGE12I	P0CL82	117 aa		11.21	□□□□□ -0.61
PTPA-225	ENST00000455240	IGLC2	P0DOY2	106 aa		11.21	□□□□□ -0.61
PTPA-225	ENST00000455240	HOXA5	P20719	270 aa		11.21	□□□□□ -0.61
PTPA-225	ENST00000455240	OPCML	Q14982	345 aa		11.21	□□□□□ -0.61
PTPA-225	ENST00000455240	MORN5	Q5VZ52	161 aa		11.21	□□□□□ -0.61
PTPA-225	ENST00000455240	TMEM37	Q8WXS4	190 aa		11.21	□□□□□ -0.61
PTPA-225	ENST00000455240	MGST2	Q99735	147 aa		11.21	□□□□□ -0.61
PTPA-225	ENST00000455240	GSKIP	Q9P0R6	139 aa		11.21	□□□□□ -0.61
PTPA-225	ENST00000455240		A0A1W2PPQ1	181 aa		11.2	□□□□□ -0.62
PTPA-225	ENST00000455240		H3BNG1	76 aa		11.2	□□□□□ -0.62
PTPA-225	ENST00000455240	BAK1	Q16611	211 aa		11.2	□□□□□ -0.62
PTPA-225	ENST00000455240	C10orf113	Q5VZT2	155 aa		11.2	□□□□□ -0.62
PTPA-225	ENST00000455240	ODF3	Q96PU9	254 aa		11.2	□□□□□ -0.62
PTPA-225	ENST00000455240	MRPS16	Q9Y3D3	137 aa	Known RBP	11.2	□□□□□ -0.62
PTPA-225	ENST00000455240	C7orf66	A4D0T2	115 aa		11.19	□□□□□ -0.62
PTPA-225	ENST00000455240		H3BQ15	152 aa		11.19	□□□□□ -0.62
PTPA-225	ENST00000455240	MBP	P02686	304 aa	Predicted RBP	11.19	□□□□□ -0.62
PTPA-225	ENST00000455240	CT45A10	P0DMU9	189 aa		11.19	□□□□□ -0.62
PTPA-225	ENST00000455240	BTC	P35070	178 aa		11.19	□□□□□ -0.62
PTPA-225	ENST00000455240	LEP	P41159	167 aa		11.19	□□□□□ -0.62
PTPA-225	ENST00000455240	ESRG	Q1W209	222 aa		11.19	□□□□□ -0.62
PTPA-225	ENST00000455240		Q8N1X5	172 aa		11.19	□□□□□ -0.62
PTPA-225	ENST00000455240	MITD1	Q8WV92	249 aa		11.19	□□□□□ -0.62
PTPA-225	ENST00000455240	SAT2	Q96F10	170 aa	Predicted RBP	11.19	□□□□□ -0.62
PTPA-225	ENST00000455240	TMPRSS5	Q9H3S3	457 aa		11.19	□□□□□ -0.62
PTPA-225	ENST00000455240	DNAH5	Q8TE73	4624 aa		11.19	□□□□□ -0.62
PTPA-225	ENST00000455240	TRAV12-3	A0A0B4J271	114 aa		11.18	□□□□□ -0.62
PTPA-225	ENST00000455240	LINC00854	A0A1B0GVQ3	168 aa		11.18	□□□□□ -0.62
PTPA-225	ENST00000455240	NPIPB6	E9PJ23	425 aa		11.18	□□□□□ -0.62
PTPA-225	ENST00000455240		J3KRW8	73 aa		11.18	□□□□□ -0.62
PTPA-225	ENST00000455240	BTF3	P20290	206 aa	Known RBP	11.18	□□□□□ -0.62
PTPA-225	ENST00000455240	DAZ2	Q13117	558 aa	Known RBP	11.18	□□□□□ -0.62
PTPA-225	ENST00000455240	GUK1	Q16774	197 aa		11.18	□□□□□ -0.62
PTPA-225	ENST00000455240	PYGO2	Q9BRQ0	406 aa		11.18	□□□□□ -0.62
PTPA-225	ENST00000455240	DNAJC4	Q9NNZ3	241 aa		11.18	□□□□□ -0.62
PTPA-225	ENST00000455240	CENPX	A8MT69	81 aa		11.17	□□□□□ -0.62
PTPA-225	ENST00000455240	CAMLG	P49069	296 aa		11.17	□□□□□ -0.62
PTPA-225	ENST00000455240	RAB31	Q13636	194 aa		11.17	□□□□□ -0.62
PTPA-225	ENST00000455240		Q6ZRG5	221 aa		11.17	□□□□□ -0.62
PTPA-225	ENST00000455240		Q6ZTI0	123 aa		11.17	□□□□□ -0.62
PTPA-225	ENST00000455240		L7N2F9	121 aa		11.16	□□□□□ -0.62
PTPA-225	ENST00000455240	KRTAP10-2	P60368	255 aa		11.16	□□□□□ -0.62
PTPA-225	ENST00000455240	VAMP2	P63027	116 aa		11.16	□□□□□ -0.62
PTPA-225	ENST00000455240	MIC13	Q5XKP0	118 aa		11.16	□□□□□ -0.62
PTPA-225	ENST00000455240	NRARP	Q7Z6K4	114 aa		11.16	□□□□□ -0.62
PTPA-225	ENST00000455240	ZNF431	Q8TF32	576 aa	Predicted RBP	11.16	□□□□□ -0.62
PTPA-225	ENST00000455240	RBM38	Q9H0Z9	239 aa	Known RBP	11.16	□□□□□ -0.62
PTPA-225	ENST00000455240	TRAV5	A0A0B4J249	113 aa		11.15	□□□□□ -0.62
PTPA-225	ENST00000455240	CCS	O14618	274 aa		11.15	□□□□□ -0.62
PTPA-225	ENST00000455240	ZNF253	O75346	499 aa		11.15	□□□□□ -0.62
PTPA-225	ENST00000455240	ZNF846	Q147U1	533 aa		11.15	□□□□□ -0.62
PTPA-225	ENST00000455240	CNPY1	Q3B7I2	92 aa		11.15	□□□□□ -0.62
PTPA-225	ENST00000455240	ZNF680	Q8NEM1	530 aa		11.15	□□□□□ -0.62
PTPA-225	ENST00000455240	OR1L4	Q8NGR5	311 aa		11.15	□□□□□ -0.62
PTPA-225	ENST00000455240	MRPL53	Q96EL3	112 aa	Known RBP	11.15	□□□□□ -0.62
PTPA-225	ENST00000455240	PFDN5	Q99471	154 aa		11.15	□□□□□ -0.62
PTPA-225	ENST00000455240	SDHC	Q99643	169 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPA-225	ENST00000455240	SCRT2	Q9NQ03	307 aa		11.15	□□□□□ -0.62
PTPA-225	ENST00000455240	ZNF586	Q9NXT0	402 aa		11.15	□□□□□ -0.62
PTPA-225	ENST00000455240	TRGV2	A0A075B6R0	118 aa		11.14	□□□□□ -0.63
PTPA-225	ENST00000455240	SLC25A5	P05141	298 aa	Known RBP	11.14	□□□□□ -0.63
PTPA-225	ENST00000455240	BCAP31	P51572	246 aa		11.14	□□□□□ -0.63
PTPA-225	ENST00000455240	CAV2	P51636	162 aa		11.14	□□□□□ -0.63
PTPA-225	ENST00000455240	C11orf72	Q8NBR9	251 aa		11.14	□□□□□ -0.63
PTPA-225	ENST00000455240	VSIG2	Q96IQ7	327 aa		11.14	□□□□□ -0.63
PTPA-225	ENST00000455240	C18orf15	Q96N68	181 aa		11.14	□□□□□ -0.63
PTPA-225	ENST00000455240	UQCC1	Q9NVA1	299 aa		11.14	□□□□□ -0.63
PTPA-225	ENST00000455240	WDR83OS	Q9Y284	106 aa		11.14	□□□□□ -0.63
PTPA-225	ENST00000455240	LSM5	Q9Y4Y9	91 aa	Known RBP	11.14	□□□□□ -0.63
PTPA-225	ENST00000455240		A0A096LPF7	62 aa		11.13	□□□□□ -0.63
PTPA-225	ENST00000455240	C7orf71	A4D174	169 aa		11.13	□□□□□ -0.63
PTPA-225	ENST00000455240	CST7	O76096	145 aa		11.13	□□□□□ -0.63
PTPA-225	ENST00000455240	LINC00315	P59091	139 aa		11.13	□□□□□ -0.63
PTPA-225	ENST00000455240	C20orf85	Q9H1P6	137 aa		11.13	□□□□□ -0.63
PTPA-225	ENST00000455240	GSN-AS1	Q9NRJ2	163 aa		11.13	□□□□□ -0.63
PTPA-225	ENST00000455240	SLC39A9	Q9NUM3	307 aa		11.13	□□□□□ -0.63
PTPA-225	ENST00000455240	TRBV19	A0A075B6N1	114 aa		11.12	□□□□□ -0.63
PTPA-225	ENST00000455240	FAM25E	A8MYX2	175 aa		11.12	□□□□□ -0.63
PTPA-225	ENST00000455240	KLLN	B2CW77	178 aa		11.12	□□□□□ -0.63
PTPA-225	ENST00000455240		M0R3E3	92 aa		11.12	□□□□□ -0.63
PTPA-225	ENST00000455240	IL7	P13232	177 aa		11.12	□□□□□ -0.63
PTPA-225	ENST00000455240	VWC2	Q2TAL6	325 aa		11.12	□□□□□ -0.63
PTPA-225	ENST00000455240	LINC00467	Q9BRT7	94 aa		11.12	□□□□□ -0.63
PTPA-225	ENST00000455240	C11orf1	Q9H5F2	150 aa		11.12	□□□□□ -0.63
PTPA-225	ENST00000455240	FUT9	Q9Y231	359 aa		11.12	□□□□□ -0.63
PTPA-225	ENST00000455240	TRGV1	A0A0A0MS02	117 aa		11.11	□□□□□ -0.63
PTPA-225	ENST00000455240	UBE2L5P	A0A1B0GUS4	154 aa		11.11	□□□□□ -0.63
PTPA-225	ENST00000455240	FAM24A	A6NFZ4	105 aa		11.11	□□□□□ -0.63
PTPA-225	ENST00000455240	RPL29	P47914	159 aa	Known RBP	11.11	□□□□□ -0.63
PTPA-225	ENST00000455240	ERCC8	Q13216	396 aa		11.11	□□□□□ -0.63
PTPA-225	ENST00000455240	BTN1A1	Q13410	526 aa		11.11	□□□□□ -0.63
PTPA-225	ENST00000455240	ANXA2R	Q3ZCQ2	193 aa		11.11	□□□□□ -0.63
PTPA-225	ENST00000455240	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPA-225	ENST00000455240	EIF4E3	Q8N5X7	224 aa	Known RBP	11.11	□□□□□ -0.63
PTPA-225	ENST00000455240	TMEM14C	Q9P0S9	112 aa		11.11	□□□□□ -0.63
PTPA-225	ENST00000455240	PRELID1	Q9Y255	219 aa		11.11	□□□□□ -0.63
PTPA-225	ENST00000455240	ZNF324	O75467	553 aa	Predicted RBP	11.1	□□□□□ -0.63
PTPA-225	ENST00000455240	NDUFB4	O95168	129 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms