RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 C20orf173Q96LM9 149 aa12.45□□□□□ -0.42
LINC00963-208ENST00000454968 EPDR1Q9UM22 224 aa12.45□□□□□ -0.42
LINC00963-208ENST00000454968 TCRAP04437 139 aa12.45□□□□□ -0.42
LINC00963-208ENST00000454968 CD33P20138 364 aa12.45□□□□□ -0.42
LINC00963-208ENST00000454968 HLA-DMBP28068 263 aa12.45□□□□□ -0.42
LINC00963-208ENST00000454968 BEAN1Q3B7T3 259 aa12.45□□□□□ -0.42
LINC00963-208ENST00000454968 LCN12Q6JVE5 192 aa12.45□□□□□ -0.42
LINC00963-208ENST00000454968 GBGT1Q8N5D6 347 aa12.45□□□□□ -0.42
LINC00963-208ENST00000454968 FAM24BQ8N5W8 94 aa12.45□□□□□ -0.42
LINC00963-208ENST00000454968 SLC35B3Q9H1N7 401 aa12.45□□□□□ -0.42
LINC00963-208ENST00000454968 KLF12Q9Y4X4 402 aa12.45□□□□□ -0.42
LINC00963-208ENST00000454968 DNAH3Q8TD57 4116 aa12.44□□□□□ -0.42
LINC00963-208ENST00000454968 IGKV3-7A0A075B6H7 116 aa12.44□□□□□ -0.42
LINC00963-208ENST00000454968 SERTM2A0A1B0GWG4 89 aa12.44□□□□□ -0.42
LINC00963-208ENST00000454968 SCO2A0A1W2PP80 73 aa12.44□□□□□ -0.42
LINC00963-208ENST00000454968 DIRC3C9JPN6 131 aa12.44□□□□□ -0.42
LINC00963-208ENST00000454968 IGFL4Q6B9Z1 124 aa12.44□□□□□ -0.42
LINC00963-208ENST00000454968 FAM110AQ9BQ89 295 aa12.44□□□□□ -0.42
LINC00963-208ENST00000454968 ATG101Q9BSB4 218 aa12.44□□□□□ -0.42
LINC00963-208ENST00000454968 RBAKDNA6NC62 111 aa12.43□□□□□ -0.42
LINC00963-208ENST00000454968 OR4C46A6NHA9 309 aa12.43□□□□□ -0.42
LINC00963-208ENST00000454968 DNASE2O00115 360 aaPredicted RBP12.43□□□□□ -0.42
LINC00963-208ENST00000454968 PEX7O00628 323 aa12.43□□□□□ -0.42
LINC00963-208ENST00000454968 SLC25A5P05141 298 aaKnown RBP12.43□□□□□ -0.42
LINC00963-208ENST00000454968 ID1P41134 155 aa12.43□□□□□ -0.42
LINC00963-208ENST00000454968 RNF182Q8N6D2 247 aa12.43□□□□□ -0.42
LINC00963-208ENST00000454968 CYB561D1Q8N8Q1 229 aa12.43□□□□□ -0.42
LINC00963-208ENST00000454968 RPUSD4Q96CM3 377 aaKnown RBP12.43□□□□□ -0.42
LINC00963-208ENST00000454968 TMEM218A2RU14 115 aa12.42□□□□□ -0.42
LINC00963-208ENST00000454968 GNG5P63218 68 aa12.42□□□□□ -0.42
LINC00963-208ENST00000454968 PRR31Q5SQ13 230 aa12.42□□□□□ -0.42
LINC00963-208ENST00000454968 CMTM2Q8TAZ6 248 aa12.42□□□□□ -0.42
LINC00963-208ENST00000454968 TRBV6-1A0A0K0K1D8 114 aa12.41□□□□□ -0.42
LINC00963-208ENST00000454968 ZNF705FA8MVS1 300 aaPredicted RBP12.41□□□□□ -0.42
LINC00963-208ENST00000454968 IGLV2-11P01706 119 aa12.41□□□□□ -0.42
LINC00963-208ENST00000454968 SNRPD3P62318 126 aaKnown RBP12.41□□□□□ -0.42
LINC00963-208ENST00000454968 C10orf91Q5T1B1 145 aa12.41□□□□□ -0.42
LINC00963-208ENST00000454968 GPR61Q9BZJ8 451 aa12.41□□□□□ -0.42
LINC00963-208ENST00000454968 TREM1Q9NP99 234 aa12.41□□□□□ -0.42
LINC00963-208ENST00000454968 PPP1R14DQ9NXH3 145 aa12.41□□□□□ -0.42
LINC00963-208ENST00000454968 DNHD1Q96M86 4753 aa12.41□□□□□ -0.42
LINC00963-208ENST00000454968 PRAC2D3DTV9 90 aa12.4□□□□□ -0.42
LINC00963-208ENST00000454968 IGLL1P15814 213 aa12.4□□□□□ -0.42
LINC00963-208ENST00000454968 CSN1S1P47710 185 aa12.4□□□□□ -0.42
LINC00963-208ENST00000454968 TFPI2P48307 235 aa12.4□□□□□ -0.42
LINC00963-208ENST00000454968 WFDC3Q8IUB2 231 aa12.4□□□□□ -0.42
LINC00963-208ENST00000454968 TMEM75Q8N9X5 138 aa12.4□□□□□ -0.42
LINC00963-208ENST00000454968 FBLL1A6NHQ2 334 aaKnown RBP12.39□□□□□ -0.43
LINC00963-208ENST00000454968 SFTA3P0C7M3 94 aa12.39□□□□□ -0.43
LINC00963-208ENST00000454968 ZNF688P0C7X2 276 aa12.39□□□□□ -0.43
LINC00963-208ENST00000454968 ADCYAP1P18509 176 aa12.39□□□□□ -0.43
LINC00963-208ENST00000454968 TMEM183BQ1AE95 376 aa12.39□□□□□ -0.43
LINC00963-208ENST00000454968 ODF3L2Q3SX64 289 aa12.39□□□□□ -0.43
LINC00963-208ENST00000454968 C9orf47Q6ZRZ4 202 aa12.39□□□□□ -0.43
LINC00963-208ENST00000454968 DERL1Q9BUN8 251 aa12.39□□□□□ -0.43
LINC00963-208ENST00000454968 PARLQ9H300 379 aa12.39□□□□□ -0.43
LINC00963-208ENST00000454968 MAP6D1Q9H9H5 199 aa12.39□□□□□ -0.43
LINC00963-208ENST00000454968 C19orf73Q9NVV2 129 aa12.39□□□□□ -0.43
LINC00963-208ENST00000454968 AGRNO00468 2067 aa12.39□□□□□ -0.43
LINC00963-208ENST00000454968 TRBV20OR9-2A0A075B6H5 130 aa12.38□□□□□ -0.43
LINC00963-208ENST00000454968 A8MTW9 85 aa12.38□□□□□ -0.43
LINC00963-208ENST00000454968 S100A9P06702 114 aaKnown RBP12.38□□□□□ -0.43
LINC00963-208ENST00000454968 CMC4P56277 68 aaPredicted RBP12.38□□□□□ -0.43
LINC00963-208ENST00000454968 TAS2R60P59551 318 aa12.38□□□□□ -0.43
LINC00963-208ENST00000454968 FAM74A3Q4VXF1 159 aa12.38□□□□□ -0.43
LINC00963-208ENST00000454968 GOLT1AQ6ZVE7 132 aa12.38□□□□□ -0.43
LINC00963-208ENST00000454968 CITED4Q96RK1 184 aa12.38□□□□□ -0.43
LINC00963-208ENST00000454968 C9JCJ5 164 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 NPIPB6E9PJ23 425 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 RPL35P42766 123 aaKnown RBP12.37□□□□□ -0.43
LINC00963-208ENST00000454968 EGFEM1PQ0D2K5 195 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 PSMG4Q5JS54 123 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 ZNF738Q8NE65 137 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 OR8A1Q8NGG7 326 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 FMC1Q96HJ9 113 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 IGF2BP2-AS1Q96M15 143 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 LINC00479Q96M42 142 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 LINC00052Q96N35 136 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 SEC11CQ9BY50 192 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 NBEAL1Q6ZS30 2694 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 IGKV2-40A0A087WW87 121 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-208ENST00000454968 A0A0J9YX75 114 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 IGKV2D-40P01614 121 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-208ENST00000454968 AKR1C3P42330 323 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 CNN1P51911 297 aaKnown RBP12.37□□□□□ -0.43
LINC00963-208ENST00000454968 GUCA2BQ16661 112 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 SOHLH1Q5JUK2 328 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 FOXI2Q6ZQN5 318 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 COX8CQ7Z4L0 72 aa12.37□□□□□ -0.43
LINC00963-208ENST00000454968 SAV1Q9H4B6 383 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-208ENST00000454968 CARHSP1Q9Y2V2 147 aaKnown RBP12.37□□□□□ -0.43
LINC00963-208ENST00000454968 MGAM2Q2M2H8 2515 aa12.36□□□□□ -0.43
LINC00963-208ENST00000454968 KRBOX1C9JBD0 128 aa12.36□□□□□ -0.43
LINC00963-208ENST00000454968 K7EQM0 130 aa12.36□□□□□ -0.43
LINC00963-208ENST00000454968 LTAP01374 205 aa12.36□□□□□ -0.43
LINC00963-208ENST00000454968 DEFB131AP59861 70 aa12.36□□□□□ -0.43
LINC00963-208ENST00000454968 SMIM12Q96EX1 92 aa12.36□□□□□ -0.43
LINC00963-208ENST00000454968 FAM19A4Q96LR4 140 aa12.36□□□□□ -0.43
LINC00963-208ENST00000454968 CLUHP3Q96NS8 147 aa12.36□□□□□ -0.43
LINC00963-208ENST00000454968 VGLL1Q99990 258 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms