RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 IGF2BP2-AS1Q96M15 143 aa10.23□□□□□ -0.77
HDAC4-205ENST00000454542 PAXXQ9BUH6 204 aa10.23□□□□□ -0.77
HDAC4-205ENST00000454542 PRELID1Q9Y255 219 aa10.23□□□□□ -0.77
HDAC4-205ENST00000454542 NPIPB6E9PJ23 425 aa10.22□□□□□ -0.77
HDAC4-205ENST00000454542 M0R3E3 92 aa10.22□□□□□ -0.77
HDAC4-205ENST00000454542 ZNF345Q14585 488 aa10.22□□□□□ -0.77
HDAC4-205ENST00000454542 SPINK13Q1W4C9 94 aa10.22□□□□□ -0.77
HDAC4-205ENST00000454542 RPL7L1Q6DKI1 246 aaKnown RBP10.22□□□□□ -0.77
HDAC4-205ENST00000454542 PHYHIPLQ96FC7 376 aa10.22□□□□□ -0.77
HDAC4-205ENST00000454542 ODF3Q96PU9 254 aa10.22□□□□□ -0.77
HDAC4-205ENST00000454542 SMLR1H3BR10 107 aa10.21□□□□□ -0.77
HDAC4-205ENST00000454542 M0R2Z0 102 aa10.21□□□□□ -0.77
HDAC4-205ENST00000454542 ARPC5O15511 151 aa10.21□□□□□ -0.77
HDAC4-205ENST00000454542 OR7C2O60412 319 aa10.21□□□□□ -0.77
HDAC4-205ENST00000454542 INSP01308 110 aa10.21□□□□□ -0.77
HDAC4-205ENST00000454542 NBEAP1P0C6P0 100 aa10.21□□□□□ -0.77
HDAC4-205ENST00000454542 TAS2R45P59539 299 aa10.21□□□□□ -0.77
HDAC4-205ENST00000454542 RNF141Q8WVD5 230 aa10.21□□□□□ -0.77
HDAC4-205ENST00000454542 SH3BGRL3Q9H299 93 aa10.21□□□□□ -0.77
HDAC4-205ENST00000454542 RYR3Q15413 4870 aa10.21□□□□□ -0.78
HDAC4-205ENST00000454542 SMIM9A6NGZ8 99 aa10.2□□□□□ -0.78
HDAC4-205ENST00000454542 HMSDA8MTL9 139 aa10.2□□□□□ -0.78
HDAC4-205ENST00000454542 DEFB4AO15263 64 aa10.2□□□□□ -0.78
HDAC4-205ENST00000454542 OR10J4P0C629 311 aa10.2□□□□□ -0.78
HDAC4-205ENST00000454542 PRB4P10163 310 aaPredicted RBP10.2□□□□□ -0.78
HDAC4-205ENST00000454542 UBE2L3P68036 154 aaKnown RBP10.2□□□□□ -0.78
HDAC4-205ENST00000454542 SERF2P84101 59 aa10.2□□□□□ -0.78
HDAC4-205ENST00000454542 Q6ZNX1 250 aa10.2□□□□□ -0.78
HDAC4-205ENST00000454542 PQLC2Q6ZP29 291 aa10.2□□□□□ -0.78
HDAC4-205ENST00000454542 BAP18Q8IXM2 172 aa10.2□□□□□ -0.78
HDAC4-205ENST00000454542 EXOC3-AS1Q8N2X6 119 aa10.2□□□□□ -0.78
HDAC4-205ENST00000454542 OR11H4Q8NGC9 324 aa10.2□□□□□ -0.78
HDAC4-205ENST00000454542 BLNKQ8WV28 456 aa10.2□□□□□ -0.78
HDAC4-205ENST00000454542 CYTL1Q9NRR1 136 aa10.2□□□□□ -0.78
HDAC4-205ENST00000454542 GOLT1BQ9Y3E0 138 aa10.2□□□□□ -0.78
HDAC4-205ENST00000454542 BORCS7-ASMTA0A0B4J1R7 106 aa10.19□□□□□ -0.78
HDAC4-205ENST00000454542 TAAR5O14804 337 aa10.19□□□□□ -0.78
HDAC4-205ENST00000454542 CDKN1BP46527 198 aa10.19□□□□□ -0.78
HDAC4-205ENST00000454542 CDC34P49427 236 aaPredicted RBP10.19□□□□□ -0.78
HDAC4-205ENST00000454542 FAM122CQ6P4D5 195 aa10.19□□□□□ -0.78
HDAC4-205ENST00000454542 LYPD1Q8N2G4 141 aa10.19□□□□□ -0.78
HDAC4-205ENST00000454542 KCNRGQ8N5I3 272 aa10.19□□□□□ -0.78
HDAC4-205ENST00000454542 RPP25LQ8N5L8 163 aaKnown RBP10.19□□□□□ -0.78
HDAC4-205ENST00000454542 OR10G4Q8NGN3 311 aa10.19□□□□□ -0.78
HDAC4-205ENST00000454542 OR10G9Q8NGN4 311 aa10.19□□□□□ -0.78
HDAC4-205ENST00000454542 OR10G7Q8NGN6 311 aa10.19□□□□□ -0.78
HDAC4-205ENST00000454542 OR10J6PQ8NGY7 276 aa10.19□□□□□ -0.78
HDAC4-205ENST00000454542 GNPNAT1Q96EK6 184 aaPredicted RBP10.19□□□□□ -0.78
HDAC4-205ENST00000454542 FAM19A4Q96LR4 140 aa10.19□□□□□ -0.78
HDAC4-205ENST00000454542 AAMDCQ9H7C9 122 aa10.19□□□□□ -0.78
HDAC4-205ENST00000454542 RYR2Q92736 4967 aa10.18□□□□□ -0.78
HDAC4-205ENST00000454542 NUPR2A6NF83 97 aa10.18□□□□□ -0.78
HDAC4-205ENST00000454542 EIF3GO75821 320 aaKnown RBP eCLIP10.18□□□□□ -0.78
HDAC4-205ENST00000454542 MBP02144 154 aa10.18□□□□□ -0.78
HDAC4-205ENST00000454542 STAG3L2P0CL84 134 aa10.18□□□□□ -0.78
HDAC4-205ENST00000454542 STAG3L3P0CL85 134 aa10.18□□□□□ -0.78
HDAC4-205ENST00000454542 ICAM4Q14773 271 aa10.18□□□□□ -0.78
HDAC4-205ENST00000454542 C11orf45Q8TAV5 145 aa10.18□□□□□ -0.78
HDAC4-205ENST00000454542 SUN5Q8TC36 379 aa10.18□□□□□ -0.78
HDAC4-205ENST00000454542 ST6GAL2Q96JF0 529 aa10.18□□□□□ -0.78
HDAC4-205ENST00000454542 C20orf144Q9BQM9 153 aa10.18□□□□□ -0.78
HDAC4-205ENST00000454542 CELA1Q9UNI1 258 aa10.18□□□□□ -0.78
HDAC4-205ENST00000454542 TRAV12-2A0A075B6T6 113 aa10.17□□□□□ -0.78
HDAC4-205ENST00000454542 TMEM189A5PLL7 270 aa10.17□□□□□ -0.78
HDAC4-205ENST00000454542 JTBO76095 146 aa10.17□□□□□ -0.78
HDAC4-205ENST00000454542 CT45A10P0DMU9 189 aa10.17□□□□□ -0.78
HDAC4-205ENST00000454542 NANOS2P60321 138 aaKnown RBP10.17□□□□□ -0.78
HDAC4-205ENST00000454542 PMS2P11Q13670 270 aa10.17□□□□□ -0.78
HDAC4-205ENST00000454542 C9orf47Q6ZRZ4 202 aa10.17□□□□□ -0.78
HDAC4-205ENST00000454542 Q9H3A6 140 aa10.17□□□□□ -0.78
HDAC4-205ENST00000454542 TENM2Q9NT68 2774 aa10.16□□□□□ -0.78
HDAC4-205ENST00000454542 A0A1W2PPV4 95 aa10.16□□□□□ -0.78
HDAC4-205ENST00000454542 CXorf65A6NEN9 183 aa10.16□□□□□ -0.78
HDAC4-205ENST00000454542 ARL14EPLP0DKL9 152 aa10.16□□□□□ -0.78
HDAC4-205ENST00000454542 GFI1BQ5VTD9 330 aa10.16□□□□□ -0.78
HDAC4-205ENST00000454542 CEMP1Q6PRD7 247 aaPredicted RBP10.16□□□□□ -0.78
HDAC4-205ENST00000454542 SSX7Q7RTT5 188 aa10.16□□□□□ -0.78
HDAC4-205ENST00000454542 TCTE3Q8IZS6 198 aa10.16□□□□□ -0.78
HDAC4-205ENST00000454542 TMEM256Q8N2U0 113 aa10.16□□□□□ -0.78
HDAC4-205ENST00000454542 IGHV3OR16-12A0A075B7B8 117 aa10.15□□□□□ -0.78
HDAC4-205ENST00000454542 IGKV2-40A0A087WW87 121 aaPredicted RBP10.15□□□□□ -0.78
HDAC4-205ENST00000454542 RBAKDNA6NC62 111 aa10.15□□□□□ -0.78
HDAC4-205ENST00000454542 KLLNB2CW77 178 aa10.15□□□□□ -0.78
HDAC4-205ENST00000454542 IGKV2D-40P01614 121 aaPredicted RBP10.15□□□□□ -0.78
HDAC4-205ENST00000454542 HBE1P02100 147 aa10.15□□□□□ -0.78
HDAC4-205ENST00000454542 SLC25A5P05141 298 aaKnown RBP10.15□□□□□ -0.78
HDAC4-205ENST00000454542 CRISP2P16562 243 aa10.15□□□□□ -0.78
HDAC4-205ENST00000454542 TSPOP30536 169 aa10.15□□□□□ -0.78
HDAC4-205ENST00000454542 LEPP41159 167 aa10.15□□□□□ -0.78
HDAC4-205ENST00000454542 KIR3DS1Q14943 382 aa10.15□□□□□ -0.78
HDAC4-205ENST00000454542 RRN3P1Q2M238 152 aa10.15□□□□□ -0.78
HDAC4-205ENST00000454542 PHLDA1Q8WV24 401 aaPredicted RBP10.15□□□□□ -0.78
HDAC4-205ENST00000454542 RAB24Q969Q5 203 aa10.15□□□□□ -0.78
HDAC4-205ENST00000454542 LINC00477Q96M19 166 aa10.15□□□□□ -0.78
HDAC4-205ENST00000454542 ARPC5LQ9BPX5 153 aa10.15□□□□□ -0.78
HDAC4-205ENST00000454542 AGPAT4-IT1Q9H0P7 198 aa10.15□□□□□ -0.78
HDAC4-205ENST00000454542 OTORQ9NRC9 128 aa10.15□□□□□ -0.78
HDAC4-205ENST00000454542 TRBV7-9A0A0J9YWB2 115 aa10.14□□□□□ -0.79
HDAC4-205ENST00000454542 LCE6AA0A183 80 aa10.14□□□□□ -0.79
HDAC4-205ENST00000454542 LOC102723971A0A1B0GUV8 181 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms