RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 ICAM4Q14773 271 aa10.74□□□□□ -0.69
NCKIPSD-207ENST00000453349 Q6ZWC4 215 aa10.74□□□□□ -0.69
NCKIPSD-207ENST00000453349 MRPL53Q96EL3 112 aaKnown RBP10.74□□□□□ -0.69
NCKIPSD-207ENST00000453349 CLUHP3Q96NS8 147 aa10.74□□□□□ -0.69
NCKIPSD-207ENST00000453349 NOTCH1P46531 2555 aa10.73□□□□□ -0.69
NCKIPSD-207ENST00000453349 CA1P00915 261 aaPredicted RBP10.73□□□□□ -0.69
NCKIPSD-207ENST00000453349 ZNF705DP0CH99 300 aaPredicted RBP10.73□□□□□ -0.69
NCKIPSD-207ENST00000453349 ZNF705BP0CI00 300 aaPredicted RBP10.73□□□□□ -0.69
NCKIPSD-207ENST00000453349 GCHFRP30047 84 aa10.73□□□□□ -0.69
NCKIPSD-207ENST00000453349 FAM74A1Q5RGS3 127 aa10.73□□□□□ -0.69
NCKIPSD-207ENST00000453349 DPPA3Q6W0C5 159 aa10.73□□□□□ -0.69
NCKIPSD-207ENST00000453349 EXOC3-AS1Q8N2X6 119 aa10.73□□□□□ -0.69
NCKIPSD-207ENST00000453349 OR8A1Q8NGG7 326 aa10.73□□□□□ -0.69
NCKIPSD-207ENST00000453349 OR10J6PQ8NGY7 276 aa10.73□□□□□ -0.69
NCKIPSD-207ENST00000453349 TMED6Q8WW62 240 aa10.73□□□□□ -0.69
NCKIPSD-207ENST00000453349 C1QTNF4Q9BXJ3 329 aa10.73□□□□□ -0.69
NCKIPSD-207ENST00000453349 TMEM167BQ9NRX6 74 aa10.73□□□□□ -0.69
NCKIPSD-207ENST00000453349 PPP1R14DQ9NXH3 145 aa10.73□□□□□ -0.69
NCKIPSD-207ENST00000453349 CSN1S1P47710 185 aa10.72□□□□□ -0.69
NCKIPSD-207ENST00000453349 CNN1P51911 297 aaKnown RBP10.72□□□□□ -0.69
NCKIPSD-207ENST00000453349 HIST1H1AQ02539 215 aaPredicted RBP10.72□□□□□ -0.69
NCKIPSD-207ENST00000453349 ZNF726P1Q15940 193 aa10.72□□□□□ -0.69
NCKIPSD-207ENST00000453349 IQCF2Q8IXL9 164 aa10.72□□□□□ -0.69
NCKIPSD-207ENST00000453349 PHYHIPLQ96FC7 376 aa10.72□□□□□ -0.69
NCKIPSD-207ENST00000453349 Q9H3A6 140 aa10.72□□□□□ -0.69
NCKIPSD-207ENST00000453349 PGPA6NDG6 321 aa10.71□□□□□ -0.69
NCKIPSD-207ENST00000453349 SPRY2O43597 315 aa10.71□□□□□ -0.69
NCKIPSD-207ENST00000453349 RAB5CP51148 216 aa10.71□□□□□ -0.69
NCKIPSD-207ENST00000453349 NKX2-5P52952 324 aaPredicted RBP10.71□□□□□ -0.69
NCKIPSD-207ENST00000453349 SSX7Q7RTT5 188 aa10.71□□□□□ -0.69
NCKIPSD-207ENST00000453349 FAM213BQ8TBF2 198 aa10.71□□□□□ -0.69
NCKIPSD-207ENST00000453349 RCHY1Q96PM5 261 aa10.71□□□□□ -0.69
NCKIPSD-207ENST00000453349 PLA2G2EQ9NZK7 142 aa10.71□□□□□ -0.69
NCKIPSD-207ENST00000453349 TP53TG1Q9Y2A0 90 aa10.71□□□□□ -0.69
NCKIPSD-207ENST00000453349 U3KQK5 164 aa10.71□□□□□ -0.69
NCKIPSD-207ENST00000453349 MAP1LC3B2A6NCE7 125 aa10.7□□□□□ -0.7
NCKIPSD-207ENST00000453349 M0R3E3 92 aa10.7□□□□□ -0.7
NCKIPSD-207ENST00000453349 FXYD7P58549 80 aa10.7□□□□□ -0.7
NCKIPSD-207ENST00000453349 DEFB135Q30KP9 77 aa10.7□□□□□ -0.7
NCKIPSD-207ENST00000453349 CMTM2Q8TAZ6 248 aa10.7□□□□□ -0.7
NCKIPSD-207ENST00000453349 SUN5Q8TC36 379 aa10.7□□□□□ -0.7
NCKIPSD-207ENST00000453349 RXFP4Q8TDU9 374 aa10.7□□□□□ -0.7
NCKIPSD-207ENST00000453349 RNF183Q96D59 192 aa10.7□□□□□ -0.7
NCKIPSD-207ENST00000453349 MAP1LC3BQ9GZQ8 125 aa10.7□□□□□ -0.7
NCKIPSD-207ENST00000453349 RETNQ9HD89 108 aa10.7□□□□□ -0.7
NCKIPSD-207ENST00000453349 OTORQ9NRC9 128 aa10.7□□□□□ -0.7
NCKIPSD-207ENST00000453349 A8MTW9 85 aa10.69□□□□□ -0.7
NCKIPSD-207ENST00000453349 PRAC2D3DTV9 90 aa10.69□□□□□ -0.7
NCKIPSD-207ENST00000453349 AMBPP02760 352 aa10.69□□□□□ -0.7
NCKIPSD-207ENST00000453349 PRB4P10163 310 aaPredicted RBP10.69□□□□□ -0.7
NCKIPSD-207ENST00000453349 FHITP49789 147 aa10.69□□□□□ -0.7
NCKIPSD-207ENST00000453349 FGF8P55075 233 aaPredicted RBP10.69□□□□□ -0.7
NCKIPSD-207ENST00000453349 SFT2D1Q8WV19 159 aa10.69□□□□□ -0.7
NCKIPSD-207ENST00000453349 OVOL2Q9BRP0 275 aa10.69□□□□□ -0.7
NCKIPSD-207ENST00000453349 SLC35B3Q9H1N7 401 aa10.69□□□□□ -0.7
NCKIPSD-207ENST00000453349 XCL2Q9UBD3 114 aa10.69□□□□□ -0.7
NCKIPSD-207ENST00000453349 H2AFB1P0C5Y9 115 aa10.68□□□□□ -0.7
NCKIPSD-207ENST00000453349 SULT1A2P50226 295 aa10.68□□□□□ -0.7
NCKIPSD-207ENST00000453349 ARL6IP6Q8N6S5 226 aa10.68□□□□□ -0.7
NCKIPSD-207ENST00000453349 MBD3L1Q8WWY6 194 aa10.68□□□□□ -0.7
NCKIPSD-207ENST00000453349 LINC00477Q96M19 166 aa10.68□□□□□ -0.7
NCKIPSD-207ENST00000453349 NPIPB6E9PJ23 425 aa10.67□□□□□ -0.7
NCKIPSD-207ENST00000453349 TEX46H3BTG2 121 aa10.67□□□□□ -0.7
NCKIPSD-207ENST00000453349 GIG44P09565 113 aaPredicted RBP10.67□□□□□ -0.7
NCKIPSD-207ENST00000453349 AMTNQ6UX39 209 aa10.67□□□□□ -0.7
NCKIPSD-207ENST00000453349 RARRES2Q99969 163 aa10.67□□□□□ -0.7
NCKIPSD-207ENST00000453349 TMPRSS5Q9H3S3 457 aa10.67□□□□□ -0.7
NCKIPSD-207ENST00000453349 DNAH3Q8TD57 4116 aa10.67□□□□□ -0.7
NCKIPSD-207ENST00000453349 A0A1W2PRE2 83 aa10.66□□□□□ -0.7
NCKIPSD-207ENST00000453349 RBAKDNA6NC62 111 aa10.66□□□□□ -0.7
NCKIPSD-207ENST00000453349 DIRC3C9JPN6 131 aa10.66□□□□□ -0.7
NCKIPSD-207ENST00000453349 BOLA2-SMG1P6H3BVE0 249 aa10.66□□□□□ -0.7
NCKIPSD-207ENST00000453349 SLC25A5P05141 298 aaKnown RBP10.66□□□□□ -0.7
NCKIPSD-207ENST00000453349 TSPOP30536 169 aa10.66□□□□□ -0.7
NCKIPSD-207ENST00000453349 SUMO1P63165 101 aaKnown RBP10.66□□□□□ -0.7
NCKIPSD-207ENST00000453349 ERCC8Q13216 396 aa10.66□□□□□ -0.7
NCKIPSD-207ENST00000453349 SPINK13Q1W4C9 94 aa10.66□□□□□ -0.7
NCKIPSD-207ENST00000453349 TMEM78Q5T7P6 136 aa10.66□□□□□ -0.7
NCKIPSD-207ENST00000453349 OR11H2Q8NH07 326 aa10.66□□□□□ -0.7
NCKIPSD-207ENST00000453349 NKX6-2Q9C056 277 aaPredicted RBP10.66□□□□□ -0.7
NCKIPSD-207ENST00000453349 RPH3ALQ9UNE2 315 aa10.66□□□□□ -0.7
NCKIPSD-207ENST00000453349 BOLA1Q9Y3E2 137 aa10.66□□□□□ -0.7
NCKIPSD-207ENST00000453349 IGKV2-40A0A087WW87 121 aaPredicted RBP10.65□□□□□ -0.7
NCKIPSD-207ENST00000453349 M0R2Z0 102 aa10.65□□□□□ -0.7
NCKIPSD-207ENST00000453349 IGKV2D-40P01614 121 aaPredicted RBP10.65□□□□□ -0.7
NCKIPSD-207ENST00000453349 LEPP41159 167 aa10.65□□□□□ -0.7
NCKIPSD-207ENST00000453349 CDKN1BP46527 198 aa10.65□□□□□ -0.7
NCKIPSD-207ENST00000453349 UBE2G2P60604 165 aa10.65□□□□□ -0.7
NCKIPSD-207ENST00000453349 C9orf47Q6ZRZ4 202 aa10.65□□□□□ -0.7
NCKIPSD-207ENST00000453349 CSNK1G2-AS1Q8NCQ2 148 aa10.65□□□□□ -0.7
NCKIPSD-207ENST00000453349 AGPAT4-IT1Q9H0P7 198 aa10.65□□□□□ -0.7
NCKIPSD-207ENST00000453349 K7EQM0 130 aa10.64□□□□□ -0.71
NCKIPSD-207ENST00000453349 CT45A10P0DMU9 189 aa10.64□□□□□ -0.71
NCKIPSD-207ENST00000453349 PPT1P50897 306 aa10.64□□□□□ -0.71
NCKIPSD-207ENST00000453349 ALKAL2Q6UX46 152 aa10.64□□□□□ -0.71
NCKIPSD-207ENST00000453349 C5orf17Q8NAS9 161 aa10.64□□□□□ -0.71
NCKIPSD-207ENST00000453349 IGF2BP2-AS1Q96M15 143 aa10.64□□□□□ -0.71
NCKIPSD-207ENST00000453349 ODF3Q96PU9 254 aa10.64□□□□□ -0.71
NCKIPSD-207ENST00000453349 GOLT1BQ9Y3E0 138 aa10.64□□□□□ -0.71
NCKIPSD-207ENST00000453349 IGHV3OR16-12A0A075B7B8 117 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms