RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 PQLC2Q6ZP29 291 aa11.52□□□□□ -0.57
VCX3B-204ENST00000453306 SRD5A3Q9H8P0 318 aa11.52□□□□□ -0.57
VCX3B-204ENST00000453306 EDA2RQ9HAV5 297 aa11.52□□□□□ -0.57
VCX3B-204ENST00000453306 MAP1LC3B2A6NCE7 125 aa11.51□□□□□ -0.57
VCX3B-204ENST00000453306 ZNF253O75346 499 aa11.51□□□□□ -0.57
VCX3B-204ENST00000453306 C4BPBP20851 252 aa11.51□□□□□ -0.57
VCX3B-204ENST00000453306 ID1P41134 155 aa11.51□□□□□ -0.57
VCX3B-204ENST00000453306 RANP62826 216 aaKnown RBP11.51□□□□□ -0.57
VCX3B-204ENST00000453306 MAP1LC3BQ9GZQ8 125 aa11.51□□□□□ -0.57
VCX3B-204ENST00000453306 RYR2Q92736 4967 aa11.51□□□□□ -0.57
VCX3B-204ENST00000453306 CXorf1O96002 111 aa11.5□□□□□ -0.57
VCX3B-204ENST00000453306 CMC4P56277 68 aaPredicted RBP11.5□□□□□ -0.57
VCX3B-204ENST00000453306 SNRPD3P62318 126 aaKnown RBP11.5□□□□□ -0.57
VCX3B-204ENST00000453306 ACTL10Q5JWF8 245 aa11.5□□□□□ -0.57
VCX3B-204ENST00000453306 DPPA3Q6W0C5 159 aa11.5□□□□□ -0.57
VCX3B-204ENST00000453306 SFT2D1Q8WV19 159 aa11.5□□□□□ -0.57
VCX3B-204ENST00000453306 YTHDF2Q9Y5A9 579 aaKnown RBP11.5□□□□□ -0.57
VCX3B-204ENST00000453306 A0A1B0GV50 99 aa11.49□□□□□ -0.57
VCX3B-204ENST00000453306 H3BMM0 161 aa11.49□□□□□ -0.57
VCX3B-204ENST00000453306 GIG44P09565 113 aaPredicted RBP11.49□□□□□ -0.57
VCX3B-204ENST00000453306 PDE6HQ13956 83 aa11.49□□□□□ -0.57
VCX3B-204ENST00000453306 ICAM4Q14773 271 aa11.49□□□□□ -0.57
VCX3B-204ENST00000453306 HAGHQ16775 308 aa11.49□□□□□ -0.57
VCX3B-204ENST00000453306 EIF5AL1Q6IS14 154 aaKnown RBP11.49□□□□□ -0.57
VCX3B-204ENST00000453306 IL17DQ8TAD2 202 aa11.49□□□□□ -0.57
VCX3B-204ENST00000453306 LRRC20Q8TCA0 184 aa11.49□□□□□ -0.57
VCX3B-204ENST00000453306 SLC50A1Q9BRV3 221 aa11.49□□□□□ -0.57
VCX3B-204ENST00000453306 Q9H3A6 140 aa11.49□□□□□ -0.57
VCX3B-204ENST00000453306 SAV1Q9H4B6 383 aaPredicted RBP11.49□□□□□ -0.57
VCX3B-204ENST00000453306 A0A0J9YX75 114 aa11.48□□□□□ -0.57
VCX3B-204ENST00000453306 H2AFB1P0C5Y9 115 aa11.48□□□□□ -0.57
VCX3B-204ENST00000453306 RPL35AP18077 110 aaKnown RBP11.48□□□□□ -0.57
VCX3B-204ENST00000453306 RAB5CP51148 216 aa11.48□□□□□ -0.57
VCX3B-204ENST00000453306 TRPT1Q86TN4 253 aaKnown RBP11.48□□□□□ -0.57
VCX3B-204ENST00000453306 ZNF738Q8NE65 137 aa11.48□□□□□ -0.57
VCX3B-204ENST00000453306 RPUSD4Q96CM3 377 aaKnown RBP11.48□□□□□ -0.57
VCX3B-204ENST00000453306 TRAV1-1A0A0B4J248 108 aa11.47□□□□□ -0.57
VCX3B-204ENST00000453306 PGPA6NDG6 321 aa11.47□□□□□ -0.57
VCX3B-204ENST00000453306 GGTLC3B5MD39 225 aa11.47□□□□□ -0.57
VCX3B-204ENST00000453306 HLA-DRB4P13762 266 aa11.47□□□□□ -0.57
VCX3B-204ENST00000453306 IFITM2Q01629 132 aa11.47□□□□□ -0.57
VCX3B-204ENST00000453306 SAMD13Q5VXD3 122 aa11.47□□□□□ -0.57
VCX3B-204ENST00000453306 TEX261Q6UWH6 196 aa11.47□□□□□ -0.57
VCX3B-204ENST00000453306 AMTNQ6UX39 209 aa11.47□□□□□ -0.57
VCX3B-204ENST00000453306 FOXI2Q6ZQN5 318 aa11.47□□□□□ -0.57
VCX3B-204ENST00000453306 ZNF680Q8NEM1 530 aa11.47□□□□□ -0.57
VCX3B-204ENST00000453306 OR8A1Q8NGG7 326 aa11.47□□□□□ -0.57
VCX3B-204ENST00000453306 HLA-DRB4X5D2U9 266 aa11.47□□□□□ -0.57
VCX3B-204ENST00000453306 DYNC2H1Q8NCM8 4307 aaKnown RBP11.46□□□□□ -0.57
VCX3B-204ENST00000453306 A8MTW9 85 aa11.46□□□□□ -0.57
VCX3B-204ENST00000453306 IGKV3-20P01619 116 aa11.46□□□□□ -0.57
VCX3B-204ENST00000453306 UBE2G2P60604 165 aa11.46□□□□□ -0.57
VCX3B-204ENST00000453306 PSG9Q00887 426 aa11.46□□□□□ -0.57
VCX3B-204ENST00000453306 IQCF2Q8IXL9 164 aa11.46□□□□□ -0.57
VCX3B-204ENST00000453306 PCNPQ8WW12 178 aaKnown RBP11.46□□□□□ -0.57
VCX3B-204ENST00000453306 TMEM167BQ9NRX6 74 aa11.46□□□□□ -0.57
VCX3B-204ENST00000453306 IGKV2-40A0A087WW87 121 aaPredicted RBP11.45□□□□□ -0.58
VCX3B-204ENST00000453306 FAM74A7A6NL05 159 aa11.45□□□□□ -0.58
VCX3B-204ENST00000453306 ZNF705EA8MWA4 302 aaPredicted RBP11.45□□□□□ -0.58
VCX3B-204ENST00000453306 IGKV2D-40P01614 121 aaPredicted RBP11.45□□□□□ -0.58
VCX3B-204ENST00000453306 CNN1P51911 297 aaKnown RBP11.45□□□□□ -0.58
VCX3B-204ENST00000453306 GNG5P63218 68 aa11.45□□□□□ -0.58
VCX3B-204ENST00000453306 ERCC8Q13216 396 aa11.45□□□□□ -0.58
VCX3B-204ENST00000453306 LYPD1Q8N2G4 141 aa11.45□□□□□ -0.58
VCX3B-204ENST00000453306 MRPL53Q96EL3 112 aaKnown RBP11.45□□□□□ -0.58
VCX3B-204ENST00000453306 LYSTQ99698 3801 aa11.45□□□□□ -0.58
VCX3B-204ENST00000453306 OTORQ9NRC9 128 aa11.45□□□□□ -0.58
VCX3B-204ENST00000453306 BIRC6Q9NR09 4857 aa11.44□□□□□ -0.58
VCX3B-204ENST00000453306 EPPK1P58107 5090 aaKnown RBP11.44□□□□□ -0.58
VCX3B-204ENST00000453306 LOC102724200A0A096LPH7 203 aaPredicted RBP11.44□□□□□ -0.58
VCX3B-204ENST00000453306 SUMO1P63165 101 aaKnown RBP11.44□□□□□ -0.58
VCX3B-204ENST00000453306 CCDC28AQ8IWP9 274 aa11.44□□□□□ -0.58
VCX3B-204ENST00000453306 LYPD6BQ8NI32 183 aa11.44□□□□□ -0.58
VCX3B-204ENST00000453306 VGLL1Q99990 258 aa11.44□□□□□ -0.58
VCX3B-204ENST00000453306 AGPAT4-IT1Q9H0P7 198 aa11.44□□□□□ -0.58
VCX3B-204ENST00000453306 PRELID1Q9Y255 219 aa11.44□□□□□ -0.58
VCX3B-204ENST00000453306 SACSQ9NZJ4 4579 aa11.43□□□□□ -0.58
VCX3B-204ENST00000453306 PAGE4O60829 102 aa11.43□□□□□ -0.58
VCX3B-204ENST00000453306 CT45A10P0DMU9 189 aa11.43□□□□□ -0.58
VCX3B-204ENST00000453306 FXYD7P58549 80 aa11.43□□□□□ -0.58
VCX3B-204ENST00000453306 HIST1H1AQ02539 215 aaPredicted RBP11.43□□□□□ -0.58
VCX3B-204ENST00000453306 STHQ8IWL8 128 aa11.43□□□□□ -0.58
VCX3B-204ENST00000453306 OR4B1Q8NGF8 309 aa11.43□□□□□ -0.58
VCX3B-204ENST00000453306 CLUHP3Q96NS8 147 aa11.43□□□□□ -0.58
VCX3B-204ENST00000453306 SLC35B3Q9H1N7 401 aa11.43□□□□□ -0.58
VCX3B-204ENST00000453306 AAMDCQ9H7C9 122 aa11.43□□□□□ -0.58
VCX3B-204ENST00000453306 CLEC5AQ9NY25 188 aa11.43□□□□□ -0.58
VCX3B-204ENST00000453306 AGRNO00468 2067 aa11.42□□□□□ -0.58
VCX3B-204ENST00000453306 A0A1W2PRE2 83 aa11.42□□□□□ -0.58
VCX3B-204ENST00000453306 DIRC3C9JPN6 131 aa11.42□□□□□ -0.58
VCX3B-204ENST00000453306 NPIPB6E9PJ23 425 aa11.42□□□□□ -0.58
VCX3B-204ENST00000453306 ATP5G3P48201 142 aa11.42□□□□□ -0.58
VCX3B-204ENST00000453306 KIR3DS1Q14943 382 aa11.42□□□□□ -0.58
VCX3B-204ENST00000453306 EBLN2Q6P2I7 272 aa11.42□□□□□ -0.58
VCX3B-204ENST00000453306 STARD9Q9P2P6 4700 aa11.42□□□□□ -0.58
VCX3B-204ENST00000453306 CSMD3Q7Z407 3707 aa11.42□□□□□ -0.58
VCX3B-204ENST00000453306 CSTL1Q9H114 145 aa11.41□□□□□ -0.58
VCX3B-204ENST00000453306 RETNQ9HD89 108 aa11.41□□□□□ -0.58
VCX3B-204ENST00000453306 CRXO43186 299 aaPredicted RBP11.4□□□□□ -0.58
VCX3B-204ENST00000453306 SLC25A5P05141 298 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms