RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 MAP1LC3B2A6NCE7 125 aa10.74□□□□□ -0.69
TRAPPC12-211ENST00000452495 UBE2CO00762 179 aa10.74□□□□□ -0.69
TRAPPC12-211ENST00000452495 EIF3GO75821 320 aaKnown RBP eCLIP10.74□□□□□ -0.69
TRAPPC12-211ENST00000452495 DUSP14O95147 198 aaKnown RBP10.74□□□□□ -0.69
TRAPPC12-211ENST00000452495 RPL35AP18077 110 aaKnown RBP10.74□□□□□ -0.69
TRAPPC12-211ENST00000452495 HAGHQ16775 308 aa10.74□□□□□ -0.69
TRAPPC12-211ENST00000452495 FAM213BQ8TBF2 198 aa10.74□□□□□ -0.69
TRAPPC12-211ENST00000452495 SUN5Q8TC36 379 aa10.74□□□□□ -0.69
TRAPPC12-211ENST00000452495 RPUSD4Q96CM3 377 aaKnown RBP10.74□□□□□ -0.69
TRAPPC12-211ENST00000452495 MAP1LC3BQ9GZQ8 125 aa10.74□□□□□ -0.69
TRAPPC12-211ENST00000452495 PRKDCP78527 4128 aaKnown RBP10.74□□□□□ -0.69
TRAPPC12-211ENST00000452495 A8MTW9 85 aa10.73□□□□□ -0.69
TRAPPC12-211ENST00000452495 SULT1A2P50226 295 aa10.73□□□□□ -0.69
TRAPPC12-211ENST00000452495 GDF5OSQ5U4N7 250 aa10.73□□□□□ -0.69
TRAPPC12-211ENST00000452495 SBSPONQ8IVN8 264 aa10.73□□□□□ -0.69
TRAPPC12-211ENST00000452495 Q9H3A6 140 aa10.73□□□□□ -0.69
TRAPPC12-211ENST00000452495 F6UB75 175 aa10.72□□□□□ -0.69
TRAPPC12-211ENST00000452495 NHLRC4P0CG21 123 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC12-211ENST00000452495 FHITP49789 147 aa10.72□□□□□ -0.69
TRAPPC12-211ENST00000452495 DEFB1P60022 68 aa10.72□□□□□ -0.69
TRAPPC12-211ENST00000452495 NUTF2P61970 127 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-211ENST00000452495 ICAM4Q14773 271 aa10.72□□□□□ -0.69
TRAPPC12-211ENST00000452495 FAM74A1Q5RGS3 127 aa10.72□□□□□ -0.69
TRAPPC12-211ENST00000452495 IQCF2Q8IXL9 164 aa10.72□□□□□ -0.69
TRAPPC12-211ENST00000452495 EXOC3-AS1Q8N2X6 119 aa10.72□□□□□ -0.69
TRAPPC12-211ENST00000452495 OR8A1Q8NGG7 326 aa10.72□□□□□ -0.69
TRAPPC12-211ENST00000452495 TM2D3Q9BRN9 247 aa10.72□□□□□ -0.69
TRAPPC12-211ENST00000452495 CSTL1Q9H114 145 aa10.72□□□□□ -0.69
TRAPPC12-211ENST00000452495 OTORQ9NRC9 128 aa10.72□□□□□ -0.69
TRAPPC12-211ENST00000452495 BOLA2-SMG1P6H3BVE0 249 aa10.71□□□□□ -0.69
TRAPPC12-211ENST00000452495 CNN1P51911 297 aaKnown RBP10.71□□□□□ -0.69
TRAPPC12-211ENST00000452495 RANP62826 216 aaKnown RBP10.71□□□□□ -0.69
TRAPPC12-211ENST00000452495 Q6ZWC4 215 aa10.71□□□□□ -0.69
TRAPPC12-211ENST00000452495 OR10J6PQ8NGY7 276 aa10.71□□□□□ -0.69
TRAPPC12-211ENST00000452495 MBD3L1Q8WWY6 194 aa10.71□□□□□ -0.69
TRAPPC12-211ENST00000452495 SPATA25Q9BR10 227 aa10.71□□□□□ -0.69
TRAPPC12-211ENST00000452495 ZNF705FA8MVS1 300 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC12-211ENST00000452495 M0R3E3 92 aa10.7□□□□□ -0.7
TRAPPC12-211ENST00000452495 CA1P00915 261 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC12-211ENST00000452495 CSN1S1P47710 185 aa10.7□□□□□ -0.7
TRAPPC12-211ENST00000452495 FGF8P55075 233 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC12-211ENST00000452495 HIST1H1AQ02539 215 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC12-211ENST00000452495 ARL6IP6Q8N6S5 226 aa10.7□□□□□ -0.7
TRAPPC12-211ENST00000452495 OR4B1Q8NGF8 309 aa10.7□□□□□ -0.7
TRAPPC12-211ENST00000452495 RXFP4Q8TDU9 374 aa10.7□□□□□ -0.7
TRAPPC12-211ENST00000452495 ASCL2Q99929 193 aa10.7□□□□□ -0.7
TRAPPC12-211ENST00000452495 C1QTNF4Q9BXJ3 329 aa10.7□□□□□ -0.7
TRAPPC12-211ENST00000452495 ZMAT4Q9H898 229 aa10.7□□□□□ -0.7
TRAPPC12-211ENST00000452495 ARL2-SNX15V9GYD0 113 aa10.7□□□□□ -0.7
TRAPPC12-211ENST00000452495 COL7A1Q02388 2944 aa10.69□□□□□ -0.7
TRAPPC12-211ENST00000452495 A0A1W2PRE2 83 aa10.69□□□□□ -0.7
TRAPPC12-211ENST00000452495 NPIPB6E9PJ23 425 aa10.69□□□□□ -0.7
TRAPPC12-211ENST00000452495 H2AFB1P0C5Y9 115 aa10.69□□□□□ -0.7
TRAPPC12-211ENST00000452495 CMTM2Q8TAZ6 248 aa10.69□□□□□ -0.7
TRAPPC12-211ENST00000452495 SFT2D1Q8WV19 159 aa10.69□□□□□ -0.7
TRAPPC12-211ENST00000452495 TP53TG1Q9Y2A0 90 aa10.69□□□□□ -0.7
TRAPPC12-211ENST00000452495 TRAV1-1A0A0B4J248 108 aa10.68□□□□□ -0.7
TRAPPC12-211ENST00000452495 RBAKDNA6NC62 111 aa10.68□□□□□ -0.7
TRAPPC12-211ENST00000452495 PRAC2D3DTV9 90 aa10.68□□□□□ -0.7
TRAPPC12-211ENST00000452495 TEX46H3BTG2 121 aa10.68□□□□□ -0.7
TRAPPC12-211ENST00000452495 IGKV3-20P01619 116 aa10.68□□□□□ -0.7
TRAPPC12-211ENST00000452495 HBE1P02100 147 aa10.68□□□□□ -0.7
TRAPPC12-211ENST00000452495 AMBPP02760 352 aa10.68□□□□□ -0.7
TRAPPC12-211ENST00000452495 AMTNQ6UX39 209 aa10.68□□□□□ -0.7
TRAPPC12-211ENST00000452495 ALKAL2Q6UX46 152 aa10.68□□□□□ -0.7
TRAPPC12-211ENST00000452495 C5orf17Q8NAS9 161 aa10.68□□□□□ -0.7
TRAPPC12-211ENST00000452495 ODF3Q96PU9 254 aa10.68□□□□□ -0.7
TRAPPC12-211ENST00000452495 NKX6-2Q9C056 277 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC12-211ENST00000452495 SERTM2A0A1B0GWG4 89 aa10.67□□□□□ -0.7
TRAPPC12-211ENST00000452495 PGPA6NDG6 321 aa10.67□□□□□ -0.7
TRAPPC12-211ENST00000452495 GGTLC3B5MD39 225 aa10.67□□□□□ -0.7
TRAPPC12-211ENST00000452495 SLC25A5P05141 298 aaKnown RBP10.67□□□□□ -0.7
TRAPPC12-211ENST00000452495 ZNF705DP0CH99 300 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC12-211ENST00000452495 ZNF705BP0CI00 300 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC12-211ENST00000452495 PPT1P50897 306 aa10.67□□□□□ -0.7
TRAPPC12-211ENST00000452495 DEFB135Q30KP9 77 aa10.67□□□□□ -0.7
TRAPPC12-211ENST00000452495 RCHY1Q96PM5 261 aa10.67□□□□□ -0.7
TRAPPC12-211ENST00000452495 TMPRSS5Q9H3S3 457 aa10.67□□□□□ -0.7
TRAPPC12-211ENST00000452495 PPP1R14DQ9NXH3 145 aa10.67□□□□□ -0.7
TRAPPC12-211ENST00000452495 ZNF705EA8MWA4 302 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC12-211ENST00000452495 DIRC3C9JPN6 131 aa10.66□□□□□ -0.7
TRAPPC12-211ENST00000452495 GIG44P09565 113 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC12-211ENST00000452495 C9orf47Q6ZRZ4 202 aa10.66□□□□□ -0.7
TRAPPC12-211ENST00000452495 RNF183Q96D59 192 aa10.66□□□□□ -0.7
TRAPPC12-211ENST00000452495 TCEAL7Q9BRU2 100 aa10.66□□□□□ -0.7
TRAPPC12-211ENST00000452495 SLC35B3Q9H1N7 401 aa10.66□□□□□ -0.7
TRAPPC12-211ENST00000452495 IGKV2-40A0A087WW87 121 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC12-211ENST00000452495 FAM74A7A6NL05 159 aa10.65□□□□□ -0.7
TRAPPC12-211ENST00000452495 SPRY2O43597 315 aa10.65□□□□□ -0.7
TRAPPC12-211ENST00000452495 IGKV2D-40P01614 121 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC12-211ENST00000452495 TSPOP30536 169 aa10.65□□□□□ -0.7
TRAPPC12-211ENST00000452495 UBE2G2P60604 165 aa10.65□□□□□ -0.7
TRAPPC12-211ENST00000452495 TMEM78Q5T7P6 136 aa10.65□□□□□ -0.7
TRAPPC12-211ENST00000452495 LINC00477Q96M19 166 aa10.65□□□□□ -0.7
TRAPPC12-211ENST00000452495 RETNQ9HD89 108 aa10.65□□□□□ -0.7
TRAPPC12-211ENST00000452495 YTHDF2Q9Y5A9 579 aaKnown RBP10.65□□□□□ -0.7
TRAPPC12-211ENST00000452495 K7EQM0 130 aa10.64□□□□□ -0.71
TRAPPC12-211ENST00000452495 LEPP41159 167 aa10.64□□□□□ -0.71
TRAPPC12-211ENST00000452495 CDKN1BP46527 198 aa10.64□□□□□ -0.71
TRAPPC12-211ENST00000452495 BLOC1S1P78537 153 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms