RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 Q6ZQT7 251 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 Q6ZS92 163 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 Q8N2B8 174 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 MUC7Q8TAX7 377 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 RETNLBQ9BQ08 111 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 LINC00467Q9BRT7 94 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 TNFRSF19Q9NS68 423 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 ASF1BQ9NVP2 202 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 ARHGEF28Q8N1W1 1705 aaKnown RBP2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 PTPRTO14522 1441 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 SCN8AQ9UQD0 1980 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 TRPM1Q7Z4N2 1603 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 MYO5AQ9Y4I1 1855 aaKnown RBP2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 IGKV1D-37A0A075B6S9 117 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 G3V3Q6 166 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 IGLV1-47P01700 117 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 COX6A1P12074 109 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 KRTAP10-6P60371 365 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 ZNF117Q03924 483 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 FUT5Q11128 374 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 PEA15Q15121 130 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 DEFB116Q30KQ4 102 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 FAM74A1Q5RGS3 127 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 IGFL3Q6UXB1 125 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 CYB561D1Q8N8Q1 229 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 TMEM105Q8N8V8 129 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 SPANXA2-OT1Q8N9U9 137 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 C1orf64Q8NEQ6 169 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 OR2T35Q8NGX2 323 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 HYLS1Q96M11 299 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 RNF5Q99942 180 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 NABP2Q9BQ15 211 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 RIC1Q4ADV7 1423 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 GLI3P10071 1580 aa2.91□□□□□ -1.94
HMGB3P21-201ENST00000452483 A0A096LNJ9 63 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 TMEM235A6NFC5 223 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 COLCA2A8K830 154 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 C17orf98A8MV24 154 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 H3BPC8 53 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 H3BQ85 93 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 K7EM74 188 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 LINC01565O15544 149 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 MT-ATP8P03928 68 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 IL5P05113 134 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 ZNF14P17017 642 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 SNCAP37840 140 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 IQCJQ1A5X6 159 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 ATP11AUNQ6ZP68 121 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 Q6ZR03 302 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 ZNF720Q7Z2F6 126 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 DYNAPQ8N1N2 210 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 CCL4L1Q8NHW4 92 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 C10orf105Q8TEF2 133 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 POP5Q969H6 163 aaKnown RBP2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 CST11Q9H112 138 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 LINC00312Q9Y6C7 94 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 LY96Q9Y6Y9 160 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 ZFC3H1O60293 1989 aaKnown RBP2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 FYCO1Q9BQS8 1478 aa2.9□□□□□ -1.95
HMGB3P21-201ENST00000452483 ALPK3Q96L96 1907 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 TANC2Q9HCD6 1990 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 PLXNB1O43157 2135 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 TRAV7A0A075B6U4 112 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 A0A087WYN8 130 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 IGHV1-24A0A0C4DH33 117 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 ZNF705FA8MVS1 300 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 H3BQ15 152 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 RPL36A-HNRNPH2H7BZ11 118 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 ADGRB1O14514 1584 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 IGKV3-20P01619 116 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 IGHV3-53P01767 116 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 IGLV7-43P04211 117 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 DEFA4P12838 97 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 FXYD2P54710 66 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 FOXF1Q12946 379 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 Q6P435 159 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 RPRMLQ8N4K4 120 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 Q8NDZ9 215 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 ATP6V0E2Q8NHE4 81 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 SPTSSAQ969W0 71 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 TMEM242Q9NWH2 141 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 RBBP6Q7Z6E9 1792 aaKnown RBP2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 ADGRL1O94910 1474 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 CCDC141Q6ZP82 1450 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 KIF26BQ2KJY2 2108 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 SCN9AQ15858 1988 aa2.89□□□□□ -1.95
HMGB3P21-201ENST00000452483 ARHGAP5Q13017 1502 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 NISCHQ9Y2I1 1504 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 ZNF407Q9C0G0 2248 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 FRMPD1Q5SYB0 1578 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 RTEL1-TNFRSF6BF6WH68 1400 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 TRAV3A0A0B4J244 114 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 LOC107984156A0A0G2JMH3 177 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 TRBV10-2A0A0K0K1G8 114 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 hDV103S1A0JD37 113 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 C17orf112F2Z3M2 114 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 H7C2G1 150 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 J3QLW9 94 aa2.88□□□□□ -1.95
HMGB3P21-201ENST00000452483 M0R233 179 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms