RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ODF3Q96PU9 254 aa7.57□□□□□ -1.2
USP1-204ENST00000452143 GGACTQ9BVM4 153 aa7.57□□□□□ -1.2
USP1-204ENST00000452143 Q9H8V8 135 aa7.57□□□□□ -1.2
USP1-204ENST00000452143 ZNF701M0R085 212 aaPredicted RBP7.56□□□□□ -1.2
USP1-204ENST00000452143 GOSR2O14653 212 aa7.56□□□□□ -1.2
USP1-204ENST00000452143 CCNKO75909 580 aa7.56□□□□□ -1.2
USP1-204ENST00000452143 RLN2P04090 185 aa7.56□□□□□ -1.2
USP1-204ENST00000452143 OR4E1P0C645 316 aa7.56□□□□□ -1.2
USP1-204ENST00000452143 OR5I1Q13606 314 aa7.56□□□□□ -1.2
USP1-204ENST00000452143 SPATA12Q7Z6I5 190 aa7.56□□□□□ -1.2
USP1-204ENST00000452143 Q8N1X5 172 aa7.56□□□□□ -1.2
USP1-204ENST00000452143 KRTAP1-5Q9BYS1 174 aa7.56□□□□□ -1.2
USP1-204ENST00000452143 PXMP4Q9Y6I8 212 aa7.56□□□□□ -1.2
USP1-204ENST00000452143 SNURFLB1AK76 121 aa7.55□□□□□ -1.2
USP1-204ENST00000452143 AGPAT2O15120 278 aa7.55□□□□□ -1.2
USP1-204ENST00000452143 COX7A2P2O60397 106 aa7.55□□□□□ -1.2
USP1-204ENST00000452143 SCGB1D2O95969 90 aa7.55□□□□□ -1.2
USP1-204ENST00000452143 IGLC2P0DOY2 106 aa7.55□□□□□ -1.2
USP1-204ENST00000452143 INPP1P49441 399 aa7.55□□□□□ -1.2
USP1-204ENST00000452143 GUK1Q16774 197 aa7.55□□□□□ -1.2
USP1-204ENST00000452143 IAH1Q2TAA2 248 aaPredicted RBP7.55□□□□□ -1.2
USP1-204ENST00000452143 SPANXN2Q5MJ10 180 aa7.55□□□□□ -1.2
USP1-204ENST00000452143 PYGO2Q9BRQ0 406 aa7.55□□□□□ -1.2
USP1-204ENST00000452143 SRRQ9GZT4 340 aa7.55□□□□□ -1.2
USP1-204ENST00000452143 RCL1Q9Y2P8 373 aaKnown RBP7.55□□□□□ -1.2
USP1-204ENST00000452143 MRPS16Q9Y3D3 137 aaKnown RBP7.55□□□□□ -1.2
USP1-204ENST00000452143 GAGE12BA1L429 117 aa7.54□□□□□ -1.2
USP1-204ENST00000452143 NPIPB6E9PJ23 425 aa7.54□□□□□ -1.2
USP1-204ENST00000452143 SLC17A3O00476 420 aa7.54□□□□□ -1.2
USP1-204ENST00000452143 GAGE7O76087 117 aa7.54□□□□□ -1.2
USP1-204ENST00000452143 GAGE12FP0CL80 117 aa7.54□□□□□ -1.2
USP1-204ENST00000452143 GAGE12GP0CL81 117 aa7.54□□□□□ -1.2
USP1-204ENST00000452143 GAGE12IP0CL82 117 aa7.54□□□□□ -1.2
USP1-204ENST00000452143 HOXA5P20719 270 aa7.54□□□□□ -1.2
USP1-204ENST00000452143 LEPP41159 167 aa7.54□□□□□ -1.2
USP1-204ENST00000452143 DAZ2Q13117 558 aaKnown RBP7.54□□□□□ -1.2
USP1-204ENST00000452143 KIR3DS1Q14943 382 aa7.54□□□□□ -1.2
USP1-204ENST00000452143 C10orf113Q5VZT2 155 aa7.54□□□□□ -1.2
USP1-204ENST00000452143 TRIQKQ629K1 86 aa7.54□□□□□ -1.2
USP1-204ENST00000452143 TMEM37Q8WXS4 190 aa7.54□□□□□ -1.2
USP1-204ENST00000452143 C18orf15Q96N68 181 aa7.54□□□□□ -1.2
USP1-204ENST00000452143 DMBT1Q9UGM3 2413 aaPredicted RBP7.53□□□□□ -1.2
USP1-204ENST00000452143 A0A0J9YY99 117 aa7.53□□□□□ -1.2
USP1-204ENST00000452143 C7orf66A4D0T2 115 aa7.53□□□□□ -1.2
USP1-204ENST00000452143 PRAC2D3DTV9 90 aa7.53□□□□□ -1.2
USP1-204ENST00000452143 ZNF253O75346 499 aa7.53□□□□□ -1.2
USP1-204ENST00000452143 RAB31Q13636 194 aa7.53□□□□□ -1.2
USP1-204ENST00000452143 OPCMLQ14982 345 aa7.53□□□□□ -1.2
USP1-204ENST00000452143 ZBTB8BQ8NAP8 495 aaPredicted RBP7.53□□□□□ -1.2
USP1-204ENST00000452143 ZNF680Q8NEM1 530 aa7.53□□□□□ -1.2
USP1-204ENST00000452143 MITD1Q8WV92 249 aa7.53□□□□□ -1.2
USP1-204ENST00000452143 MRPL53Q96EL3 112 aaKnown RBP7.53□□□□□ -1.2
USP1-204ENST00000452143 SAT2Q96F10 170 aaPredicted RBP7.53□□□□□ -1.2
USP1-204ENST00000452143 MGST2Q99735 147 aa7.53□□□□□ -1.2
USP1-204ENST00000452143 PARD6GQ9BYG4 376 aaPredicted RBP7.53□□□□□ -1.2
USP1-204ENST00000452143 CENPXA8MT69 81 aa7.52□□□□□ -1.21
USP1-204ENST00000452143 PRB4P10163 310 aaPredicted RBP7.52□□□□□ -1.21
USP1-204ENST00000452143 CAMLGP49069 296 aa7.52□□□□□ -1.21
USP1-204ENST00000452143 ARL16Q0P5N6 197 aa7.52□□□□□ -1.21
USP1-204ENST00000452143 ESRGQ1W209 222 aa7.52□□□□□ -1.21
USP1-204ENST00000452143 CNPY1Q3B7I2 92 aa7.52□□□□□ -1.21
USP1-204ENST00000452143 MORN5Q5VZ52 161 aa7.52□□□□□ -1.21
USP1-204ENST00000452143 Q6ZRG5 221 aa7.52□□□□□ -1.21
USP1-204ENST00000452143 PFDN5Q99471 154 aa7.52□□□□□ -1.21
USP1-204ENST00000452143 TMPRSS5Q9H3S3 457 aa7.52□□□□□ -1.21
USP1-204ENST00000452143 GSKIPQ9P0R6 139 aa7.52□□□□□ -1.21
USP1-204ENST00000452143 FLVCR2Q9UPI3 526 aa7.52□□□□□ -1.21
USP1-204ENST00000452143 TRAV12-3A0A0B4J271 114 aa7.51□□□□□ -1.21
USP1-204ENST00000452143 LINC00854A0A1B0GVQ3 168 aa7.51□□□□□ -1.21
USP1-204ENST00000452143 CCDC160A6NGH7 325 aa7.51□□□□□ -1.21
USP1-204ENST00000452143 H3BQ15 152 aa7.51□□□□□ -1.21
USP1-204ENST00000452143 H3BTX0 84 aa7.51□□□□□ -1.21
USP1-204ENST00000452143 MBPP02686 304 aaPredicted RBP7.51□□□□□ -1.21
USP1-204ENST00000452143 SLC25A5P05141 298 aaKnown RBP7.51□□□□□ -1.21
USP1-204ENST00000452143 SNRPCP09234 159 aaKnown RBP7.51□□□□□ -1.21
USP1-204ENST00000452143 CT45A10P0DMU9 189 aa7.51□□□□□ -1.21
USP1-204ENST00000452143 BAK1Q16611 211 aa7.51□□□□□ -1.21
USP1-204ENST00000452143 OR1L4Q8NGR5 311 aa7.51□□□□□ -1.21
USP1-204ENST00000452143 ZNF431Q8TF32 576 aaPredicted RBP7.51□□□□□ -1.21
USP1-204ENST00000452143 LINC00467Q9BRT7 94 aa7.51□□□□□ -1.21
USP1-204ENST00000452143 DNAJC4Q9NNZ3 241 aa7.51□□□□□ -1.21
USP1-204ENST00000452143 SCRT2Q9NQ03 307 aa7.51□□□□□ -1.21
USP1-204ENST00000452143 HERC1Q15751 4861 aa7.5□□□□□ -1.21
USP1-204ENST00000452143 TRGV2A0A075B6R0 118 aa7.5□□□□□ -1.21
USP1-204ENST00000452143 A0A096LPF7 62 aa7.5□□□□□ -1.21
USP1-204ENST00000452143 J3KRW8 73 aa7.5□□□□□ -1.21
USP1-204ENST00000452143 L7N2F9 121 aa7.5□□□□□ -1.21
USP1-204ENST00000452143 BTCP35070 178 aa7.5□□□□□ -1.21
USP1-204ENST00000452143 LINC00315P59091 139 aa7.5□□□□□ -1.21
USP1-204ENST00000452143 KRTAP10-2P60368 255 aa7.5□□□□□ -1.21
USP1-204ENST00000452143 VAMP2P63027 116 aa7.5□□□□□ -1.21
USP1-204ENST00000452143 PDE6HQ13956 83 aa7.5□□□□□ -1.21
USP1-204ENST00000452143 Q6ZTI0 123 aa7.5□□□□□ -1.21
USP1-204ENST00000452143 NRARPQ7Z6K4 114 aa7.5□□□□□ -1.21
USP1-204ENST00000452143 C11orf72Q8NBR9 251 aa7.5□□□□□ -1.21
USP1-204ENST00000452143 ZNF586Q9NXT0 402 aa7.5□□□□□ -1.21
USP1-204ENST00000452143 WDR83OSQ9Y284 106 aa7.5□□□□□ -1.21
USP1-204ENST00000452143 TRBV19A0A075B6N1 114 aa7.49□□□□□ -1.21
USP1-204ENST00000452143 C7orf71A4D174 169 aa7.49□□□□□ -1.21
USP1-204ENST00000452143 KLLNB2CW77 178 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms