RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859		M0R2N4	97 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	SLC17A3	O00476	420 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	MRPS12	O15235	138 aa	Known RBP	6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	CRX	O43186	299 aa	Predicted RBP	6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	SIX6	O95475	246 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	FGF7	P21781	194 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	RAB31	Q13636	194 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	FCN2	Q15485	313 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	LRRC37A5P	Q49AS3	106 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	PXDC1	Q5TGL8	231 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	LCN15	Q6UWW0	184 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859		Q6ZRG5	221 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	STX12	Q86Y82	276 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	BPIFA4P	Q86YQ2	179 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	S100Z	Q8WXG8	99 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	TMEM37	Q8WXS4	190 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	LINC01587	Q99440	93 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	C11orf1	Q9H5F2	150 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	GPN1	Q9HCN4	374 aa	Predicted RBP	6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	DNAH17	Q9UFH2	4485 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	TEX48	A0A1B0GUV7	120 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	PRAC2	D3DTV9	90 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859		H3BQ15	152 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859		P0DMU3	169 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	FAM231A	P0DMU4	169 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	FAM231C	P0DMU5	169 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	DEFB130B	P0DP73	79 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	DEFB130A	P0DP74	79 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	AZU1	P20160	251 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	SULT1A1	P50225	295 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	ASAH1	Q13510	395 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	TMEM252	Q8N6L7	170 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	SLC50A1	Q9BRV3	221 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	DNAJC4	Q9NNZ3	241 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	ZNF331	Q9NQX6	463 aa	Predicted RBP	6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	LYRM2	Q9NU23	88 aa	Predicted RBP	6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	SLC39A9	Q9NUM3	307 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	RNF24	Q9Y225	148 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	WDR83OS	Q9Y284	106 aa		6.16	□□□□□ -1.42
RFX3-209	ENST00000451859	IGLV2-18	A0A075B6J9	118 aa		6.15	□□□□□ -1.42
RFX3-209	ENST00000451859	IGLC2	P0DOY2	106 aa		6.15	□□□□□ -1.42
RFX3-209	ENST00000451859	CXCL2	P19875	107 aa		6.15	□□□□□ -1.42
RFX3-209	ENST00000451859	B2M	P61769	119 aa		6.15	□□□□□ -1.42
RFX3-209	ENST00000451859	HBG1	P69891	147 aa		6.15	□□□□□ -1.42
RFX3-209	ENST00000451859	HBG2	P69892	147 aa		6.15	□□□□□ -1.42
RFX3-209	ENST00000451859	KIR3DS1	Q14943	382 aa		6.15	□□□□□ -1.42
RFX3-209	ENST00000451859	TMEM88	Q6PEY1	159 aa		6.15	□□□□□ -1.42
RFX3-209	ENST00000451859	POM121L12	Q8N7R1	296 aa		6.15	□□□□□ -1.42
RFX3-209	ENST00000451859	OR1L4	Q8NGR5	311 aa		6.15	□□□□□ -1.42
RFX3-209	ENST00000451859	OR10J6P	Q8NGY7	276 aa		6.15	□□□□□ -1.42
RFX3-209	ENST00000451859	THAP6	Q8TBB0	222 aa		6.15	□□□□□ -1.42
RFX3-209	ENST00000451859	PFDN5	Q99471	154 aa		6.15	□□□□□ -1.42
RFX3-209	ENST00000451859	PXMP4	Q9Y6I8	212 aa		6.15	□□□□□ -1.42
RFX3-209	ENST00000451859	FAT2	Q9NYQ8	4349 aa		6.15	□□□□□ -1.43
RFX3-209	ENST00000451859	MUC4	Q99102	2169 aa		6.14	□□□□□ -1.43
RFX3-209	ENST00000451859		F5H768	121 aa		6.14	□□□□□ -1.43
RFX3-209	ENST00000451859	UPK1B	O75841	260 aa		6.14	□□□□□ -1.43
RFX3-209	ENST00000451859	S100A11	P31949	105 aa		6.14	□□□□□ -1.43
RFX3-209	ENST00000451859	CDKN1B	P46527	198 aa		6.14	□□□□□ -1.43
RFX3-209	ENST00000451859	IFITM3	Q01628	133 aa		6.14	□□□□□ -1.43
RFX3-209	ENST00000451859	NHLH2	Q02577	135 aa		6.14	□□□□□ -1.43
RFX3-209	ENST00000451859	VWC2	Q2TAL6	325 aa		6.14	□□□□□ -1.43
RFX3-209	ENST00000451859	GCSAML	Q5JQS6	135 aa		6.14	□□□□□ -1.43
RFX3-209	ENST00000451859	BLNK	Q8WV28	456 aa		6.14	□□□□□ -1.43
RFX3-209	ENST00000451859	ZNF586	Q9NXT0	402 aa		6.14	□□□□□ -1.43
RFX3-209	ENST00000451859	OR5AC2	Q9NZP5	309 aa		6.14	□□□□□ -1.43
RFX3-209	ENST00000451859	LYRM9	A8MSI8	78 aa		6.13	□□□□□ -1.43
RFX3-209	ENST00000451859		M0R3E3	92 aa		6.13	□□□□□ -1.43
RFX3-209	ENST00000451859	PYY	P10082	97 aa		6.13	□□□□□ -1.43
RFX3-209	ENST00000451859	RPL29	P47914	159 aa	Known RBP	6.13	□□□□□ -1.43
RFX3-209	ENST00000451859	IL15RA	Q13261	267 aa		6.13	□□□□□ -1.43
RFX3-209	ENST00000451859	CLINT1	Q14677	625 aa		6.13	□□□□□ -1.43
RFX3-209	ENST00000451859	OXA1L	Q15070	435 aa		6.13	□□□□□ -1.43
RFX3-209	ENST00000451859	GFI1B	Q5VTD9	330 aa		6.13	□□□□□ -1.43
RFX3-209	ENST00000451859	LINC00299	Q6ZSB3	139 aa		6.13	□□□□□ -1.43
RFX3-209	ENST00000451859	TMEM256	Q8N2U0	113 aa		6.13	□□□□□ -1.43
RFX3-209	ENST00000451859	OR5C1	Q8NGR4	320 aa		6.13	□□□□□ -1.43
RFX3-209	ENST00000451859	C16orf74	Q96GX8	76 aa		6.13	□□□□□ -1.43
RFX3-209	ENST00000451859	NPCDR1	Q9BY65	106 aa		6.13	□□□□□ -1.43
RFX3-209	ENST00000451859	NOP10	Q9NPE3	64 aa	Known RBP	6.13	□□□□□ -1.43
RFX3-209	ENST00000451859	PTTG2	Q9NZH5	202 aa		6.13	□□□□□ -1.43
RFX3-209	ENST00000451859	PKHD1	P08F94	4074 aa		6.13	□□□□□ -1.43
RFX3-209	ENST00000451859	TRAV12-3	A0A0B4J271	114 aa		6.12	□□□□□ -1.43
RFX3-209	ENST00000451859	PLAC8L1	A1L4L8	177 aa		6.12	□□□□□ -1.43
RFX3-209	ENST00000451859		E5RGE8	158 aa		6.12	□□□□□ -1.43
RFX3-209	ENST00000451859	INMT-MINDY4	F8WBC2	141 aa		6.12	□□□□□ -1.43
RFX3-209	ENST00000451859	NUDT3	O95989	172 aa		6.12	□□□□□ -1.43
RFX3-209	ENST00000451859	RLN2	P04090	185 aa		6.12	□□□□□ -1.43
RFX3-209	ENST00000451859	CT45A10	P0DMU9	189 aa		6.12	□□□□□ -1.43
RFX3-209	ENST00000451859	TSPO	P30536	169 aa		6.12	□□□□□ -1.43
RFX3-209	ENST00000451859	TAS2R60	P59551	318 aa		6.12	□□□□□ -1.43
RFX3-209	ENST00000451859	GUK1	Q16774	197 aa		6.12	□□□□□ -1.43
RFX3-209	ENST00000451859	ATP6V1F	Q16864	119 aa		6.12	□□□□□ -1.43
RFX3-209	ENST00000451859	EXOC3-AS1	Q8N2X6	119 aa		6.12	□□□□□ -1.43
RFX3-209	ENST00000451859	SAT2	Q96F10	170 aa	Predicted RBP	6.12	□□□□□ -1.43
RFX3-209	ENST00000451859	ATG101	Q9BSB4	218 aa		6.12	□□□□□ -1.43
RFX3-209	ENST00000451859	TIMM9	Q9Y5J7	89 aa		6.12	□□□□□ -1.43
RFX3-209	ENST00000451859	NPIPB6	E9PJ23	425 aa		6.11	□□□□□ -1.43
RFX3-209	ENST00000451859		H0YIZ8	118 aa		6.11	□□□□□ -1.43
RFX3-209	ENST00000451859		H7BYZ3	331 aa		6.11	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms