RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 OR8I2Q8N0Y5 310 aa12.72□□□□□ -0.37
PRPF40A-204ENST00000450303 UHRF2Q96PU4 802 aa12.72□□□□□ -0.37
PRPF40A-204ENST00000450303 FAM110AQ9BQ89 295 aa12.72□□□□□ -0.37
PRPF40A-204ENST00000450303 TXNDC17Q9BRA2 123 aa12.72□□□□□ -0.37
PRPF40A-204ENST00000450303 A0A087WWC5 75 aa12.71□□□□□ -0.37
PRPF40A-204ENST00000450303 IGHV3-49A0A0A0MS15 119 aa12.71□□□□□ -0.37
PRPF40A-204ENST00000450303 TMEM250H0YL14 139 aa12.71□□□□□ -0.37
PRPF40A-204ENST00000450303 RPL7P18124 248 aaKnown RBP12.71□□□□□ -0.37
PRPF40A-204ENST00000450303 MEF2BQ02080 365 aaPredicted RBP12.71□□□□□ -0.37
PRPF40A-204ENST00000450303 C16orf54Q6UWD8 224 aa12.71□□□□□ -0.37
PRPF40A-204ENST00000450303 SSX7Q7RTT5 188 aa12.71□□□□□ -0.37
PRPF40A-204ENST00000450303 STXBP6Q8NFX7 210 aa12.71□□□□□ -0.37
PRPF40A-204ENST00000450303 EDA2RQ9HAV5 297 aa12.71□□□□□ -0.37
PRPF40A-204ENST00000450303 SEPSECSQ9HD40 501 aaKnown RBP12.71□□□□□ -0.37
PRPF40A-204ENST00000450303 DNAH7Q8WXX0 4024 aa12.7□□□□□ -0.38
PRPF40A-204ENST00000450303 IGHV3OR16-13A0A075B7E8 117 aa12.7□□□□□ -0.38
PRPF40A-204ENST00000450303 IGHV3-74A0A0B4J1X5 117 aa12.7□□□□□ -0.38
PRPF40A-204ENST00000450303 HELTA6NFD8 242 aa12.7□□□□□ -0.38
PRPF40A-204ENST00000450303 CXorf1O96002 111 aa12.7□□□□□ -0.38
PRPF40A-204ENST00000450303 APOHP02749 345 aaPredicted RBP12.7□□□□□ -0.38
PRPF40A-204ENST00000450303 MT-ND4LP03901 98 aa12.7□□□□□ -0.38
PRPF40A-204ENST00000450303 GALR1P47211 349 aa12.7□□□□□ -0.38
PRPF40A-204ENST00000450303 BPIFA4PQ86YQ2 179 aa12.7□□□□□ -0.38
PRPF40A-204ENST00000450303 TRAV25A0A0B4J276 109 aa12.69□□□□□ -0.38
PRPF40A-204ENST00000450303 IGHV3-66A0A0C4DH42 116 aa12.69□□□□□ -0.38
PRPF40A-204ENST00000450303 MIR17HGQ75NE6 70 aa12.69□□□□□ -0.38
PRPF40A-204ENST00000450303 RYR3Q15413 4870 aa12.69□□□□□ -0.38
PRPF40A-204ENST00000450303 ZNF727A8MUV8 499 aa12.68□□□□□ -0.38
PRPF40A-204ENST00000450303 F6UZH7 168 aa12.68□□□□□ -0.38
PRPF40A-204ENST00000450303 RPL11P62913 178 aaKnown RBP12.68□□□□□ -0.38
PRPF40A-204ENST00000450303 RNF212Q495C1 297 aa12.68□□□□□ -0.38
PRPF40A-204ENST00000450303 SIGLEC15Q6ZMC9 328 aa12.68□□□□□ -0.38
PRPF40A-204ENST00000450303 PQLC2Q6ZP29 291 aa12.68□□□□□ -0.38
PRPF40A-204ENST00000450303 TCF24Q7RTU0 167 aa12.68□□□□□ -0.38
PRPF40A-204ENST00000450303 GLMPQ8WWB7 406 aa12.68□□□□□ -0.38
PRPF40A-204ENST00000450303 NAT8Q9UHE5 227 aa12.68□□□□□ -0.38
PRPF40A-204ENST00000450303 TRAV5A0A0B4J249 113 aa12.67□□□□□ -0.38
PRPF40A-204ENST00000450303 CXorf65A6NEN9 183 aa12.67□□□□□ -0.38
PRPF40A-204ENST00000450303 C1orf196B1AJZ1 125 aa12.67□□□□□ -0.38
PRPF40A-204ENST00000450303 HMGB3O15347 200 aaKnown RBP12.67□□□□□ -0.38
PRPF40A-204ENST00000450303 PDE6DO43924 150 aa12.67□□□□□ -0.38
PRPF40A-204ENST00000450303 OR7C2O60412 319 aa12.67□□□□□ -0.38
PRPF40A-204ENST00000450303 AKR1C3P42330 323 aa12.67□□□□□ -0.38
PRPF40A-204ENST00000450303 RAB5BP61020 215 aa12.67□□□□□ -0.38
PRPF40A-204ENST00000450303 PAFAH1B2P68402 229 aa12.67□□□□□ -0.38
PRPF40A-204ENST00000450303 SPATA31B1PQ5VZV4 182 aa12.67□□□□□ -0.38
PRPF40A-204ENST00000450303 FAM90A2PQ658T7 463 aa12.67□□□□□ -0.38
PRPF40A-204ENST00000450303 LEMD1Q68G75 181 aa12.67□□□□□ -0.38
PRPF40A-204ENST00000450303 OR51M1Q9H341 326 aa12.67□□□□□ -0.38
PRPF40A-204ENST00000450303 TMEM14CQ9P0S9 112 aa12.67□□□□□ -0.38
PRPF40A-204ENST00000450303 COLCA2A8K830 154 aa12.66□□□□□ -0.38
PRPF40A-204ENST00000450303 STAG3L2P0CL84 134 aa12.66□□□□□ -0.38
PRPF40A-204ENST00000450303 STAG3L3P0CL85 134 aa12.66□□□□□ -0.38
PRPF40A-204ENST00000450303 MEOX2P50222 304 aa12.66□□□□□ -0.38
PRPF40A-204ENST00000450303 MORN5Q5VZ52 161 aa12.66□□□□□ -0.38
PRPF40A-204ENST00000450303 SMIM7Q9BQ49 75 aa12.66□□□□□ -0.38
PRPF40A-204ENST00000450303 PAXXQ9BUH6 204 aa12.66□□□□□ -0.38
PRPF40A-204ENST00000450303 SLC25A2Q9BXI2 301 aa12.66□□□□□ -0.38
PRPF40A-204ENST00000450303 CTDSP1Q9GZU7 261 aa12.66□□□□□ -0.38
PRPF40A-204ENST00000450303 PAGE4O60829 102 aa12.65□□□□□ -0.38
PRPF40A-204ENST00000450303 TMEM241Q24JQ0 296 aa12.65□□□□□ -0.38
PRPF40A-204ENST00000450303 HIST1H2BAQ96A08 127 aa12.65□□□□□ -0.38
PRPF40A-204ENST00000450303 SPAG8Q99932 426 aaPredicted RBP12.65□□□□□ -0.38
PRPF40A-204ENST00000450303 TMPRSS5Q9H3S3 457 aa12.65□□□□□ -0.38
PRPF40A-204ENST00000450303 SDF2L1Q9HCN8 221 aa12.65□□□□□ -0.38
PRPF40A-204ENST00000450303 LOC102724200A0A096LPH7 203 aaPredicted RBP12.64□□□□□ -0.39
PRPF40A-204ENST00000450303 C11orf94C9JXX5 98 aa12.64□□□□□ -0.39
PRPF40A-204ENST00000450303 HIST1H1EP10412 219 aaKnown RBP12.64□□□□□ -0.39
PRPF40A-204ENST00000450303 SAMD13Q5VXD3 122 aa12.64□□□□□ -0.39
PRPF40A-204ENST00000450303 CST9LP1Q5W188 147 aa12.64□□□□□ -0.39
PRPF40A-204ENST00000450303 FAM167A-AS1Q96KT0 104 aa12.64□□□□□ -0.39
PRPF40A-204ENST00000450303 TMEM167BQ9NRX6 74 aa12.64□□□□□ -0.39
PRPF40A-204ENST00000450303 ARL2-SNX15V9GYD0 113 aa12.64□□□□□ -0.39
PRPF40A-204ENST00000450303 IGKV3-7A0A075B6H7 116 aa12.63□□□□□ -0.39
PRPF40A-204ENST00000450303 ARL14EPLP0DKL9 152 aa12.63□□□□□ -0.39
PRPF40A-204ENST00000450303 UBE2L3P68036 154 aaKnown RBP12.63□□□□□ -0.39
PRPF40A-204ENST00000450303 ZNF674Q2M3X9 581 aa12.63□□□□□ -0.39
PRPF40A-204ENST00000450303 TMEM242Q9NWH2 141 aa12.63□□□□□ -0.39
PRPF40A-204ENST00000450303 A0A087X0K7 114 aa12.62□□□□□ -0.39
PRPF40A-204ENST00000450303 NBEAP1P0C6P0 100 aa12.62□□□□□ -0.39
PRPF40A-204ENST00000450303 PYYP10082 97 aa12.62□□□□□ -0.39
PRPF40A-204ENST00000450303 RAB5AP20339 215 aa12.62□□□□□ -0.39
PRPF40A-204ENST00000450303 GCHFRP30047 84 aa12.62□□□□□ -0.39
PRPF40A-204ENST00000450303 TFPI2P48307 235 aa12.62□□□□□ -0.39
PRPF40A-204ENST00000450303 ODF3L2Q3SX64 289 aa12.62□□□□□ -0.39
PRPF40A-204ENST00000450303 RPUSD4Q96CM3 377 aaKnown RBP12.62□□□□□ -0.39
PRPF40A-204ENST00000450303 NRN1Q9NPD7 142 aa12.62□□□□□ -0.39
PRPF40A-204ENST00000450303 BIN3Q9NQY0 253 aa12.62□□□□□ -0.39
PRPF40A-204ENST00000450303 TENM2Q9NT68 2774 aa12.61□□□□□ -0.39
PRPF40A-204ENST00000450303 TRAV2A0A0B4J234 112 aa12.61□□□□□ -0.39
PRPF40A-204ENST00000450303 MRPS12O15235 138 aaKnown RBP12.61□□□□□ -0.39
PRPF40A-204ENST00000450303 EIF3GO75821 320 aaKnown RBP eCLIP12.61□□□□□ -0.39
PRPF40A-204ENST00000450303 OR10J4P0C629 311 aa12.61□□□□□ -0.39
PRPF40A-204ENST00000450303 ID1P41134 155 aa12.61□□□□□ -0.39
PRPF40A-204ENST00000450303 ADIRFQ15847 76 aa12.61□□□□□ -0.39
PRPF40A-204ENST00000450303 PARLQ9H300 379 aa12.61□□□□□ -0.39
PRPF40A-204ENST00000450303 OR4C46A6NHA9 309 aa12.6□□□□□ -0.39
PRPF40A-204ENST00000450303 IGLC2P0DOY2 106 aa12.6□□□□□ -0.39
PRPF40A-204ENST00000450303 UBE2G2P60604 165 aa12.6□□□□□ -0.39
PRPF40A-204ENST00000450303 PSG9Q00887 426 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms