RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 INSP01308 110 aa12.54□□□□□ -0.4
FAM3A-216ENST00000449971 IGLC2P0DOY2 106 aa12.54□□□□□ -0.4
FAM3A-216ENST00000449971 RRN3P1Q2M238 152 aa12.54□□□□□ -0.4
FAM3A-216ENST00000449971 NPCDR1Q9BY65 106 aa12.54□□□□□ -0.4
FAM3A-216ENST00000449971 TRAV12-2A0A075B6T6 113 aa12.53□□□□□ -0.4
FAM3A-216ENST00000449971 DEFB131BA0A096LNP1 70 aa12.53□□□□□ -0.4
FAM3A-216ENST00000449971 LOC102723971A0A1B0GUV8 181 aa12.53□□□□□ -0.4
FAM3A-216ENST00000449971 BOLA2-SMG1P6H3BVE0 249 aa12.53□□□□□ -0.4
FAM3A-216ENST00000449971 SLC17A3O00476 420 aa12.53□□□□□ -0.4
FAM3A-216ENST00000449971 CRXO43186 299 aaPredicted RBP12.53□□□□□ -0.4
FAM3A-216ENST00000449971 BAP18Q8IXM2 172 aa12.53□□□□□ -0.4
FAM3A-216ENST00000449971 RNF126Q9BV68 326 aa12.53□□□□□ -0.4
FAM3A-216ENST00000449971 KRTAP4-5Q9BYR2 181 aa12.53□□□□□ -0.4
FAM3A-216ENST00000449971 MPC2O95563 127 aa12.52□□□□□ -0.41
FAM3A-216ENST00000449971 GUK1Q16774 197 aa12.52□□□□□ -0.41
FAM3A-216ENST00000449971 GCSAMLQ5JQS6 135 aa12.52□□□□□ -0.41
FAM3A-216ENST00000449971 SAT2Q96F10 170 aaPredicted RBP12.52□□□□□ -0.41
FAM3A-216ENST00000449971 ZNF586Q9NXT0 402 aa12.52□□□□□ -0.41
FAM3A-216ENST00000449971 IGHV4-4A0A075B6R2 117 aa12.51□□□□□ -0.41
FAM3A-216ENST00000449971 ZNF705GA8MUZ8 300 aaPredicted RBP12.51□□□□□ -0.41
FAM3A-216ENST00000449971 PRAC2D3DTV9 90 aa12.51□□□□□ -0.41
FAM3A-216ENST00000449971 PRM2P04554 102 aa12.51□□□□□ -0.41
FAM3A-216ENST00000449971 PET100P0DJ07 73 aa12.51□□□□□ -0.41
FAM3A-216ENST00000449971 FAM222AQ5U5X8 452 aa12.51□□□□□ -0.41
FAM3A-216ENST00000449971 OR10J6PQ8NGY7 276 aa12.51□□□□□ -0.41
FAM3A-216ENST00000449971 PLA2G2EQ9NZK7 142 aa12.51□□□□□ -0.41
FAM3A-216ENST00000449971 DKK2Q9UBU2 259 aa12.51□□□□□ -0.41
FAM3A-216ENST00000449971 YTHDF2Q9Y5A9 579 aaKnown RBP12.51□□□□□ -0.41
FAM3A-216ENST00000449971 LINC01587Q99440 93 aa12.5□□□□□ -0.41
FAM3A-216ENST00000449971 WDR61Q9GZS3 305 aaKnown RBP12.5□□□□□ -0.41
FAM3A-216ENST00000449971 TEX48A0A1B0GUV7 120 aa12.49□□□□□ -0.41
FAM3A-216ENST00000449971 NIPSNAP3BQ9BS92 247 aa12.49□□□□□ -0.41
FAM3A-216ENST00000449971 TMEM14CQ9P0S9 112 aa12.49□□□□□ -0.41
FAM3A-216ENST00000449971 HSPB11Q9Y547 144 aa12.49□□□□□ -0.41
FAM3A-216ENST00000449971 TIMM9Q9Y5J7 89 aa12.49□□□□□ -0.41
FAM3A-216ENST00000449971 ALG5Q9Y673 324 aa12.49□□□□□ -0.41
FAM3A-216ENST00000449971 PKD1P98161 4303 aa12.48□□□□□ -0.41
FAM3A-216ENST00000449971 TRBV19A0A075B6N1 114 aa12.48□□□□□ -0.41
FAM3A-216ENST00000449971 C17orf112F2Z3M2 114 aa12.48□□□□□ -0.41
FAM3A-216ENST00000449971 RTL8CO15255 209 aa12.48□□□□□ -0.41
FAM3A-216ENST00000449971 PYYP10082 97 aa12.48□□□□□ -0.41
FAM3A-216ENST00000449971 HIST1H1EP10412 219 aaKnown RBP12.48□□□□□ -0.41
FAM3A-216ENST00000449971 HTN1P15515 57 aa12.48□□□□□ -0.41
FAM3A-216ENST00000449971 RPL12P30050 165 aaKnown RBP12.48□□□□□ -0.41
FAM3A-216ENST00000449971 CDKN1BP46527 198 aa12.48□□□□□ -0.41
FAM3A-216ENST00000449971 BLNKQ8WV28 456 aa12.48□□□□□ -0.41
FAM3A-216ENST00000449971 ATP5SQ99766 215 aa12.48□□□□□ -0.41
FAM3A-216ENST00000449971 SMIM3Q9BZL3 60 aa12.48□□□□□ -0.41
FAM3A-216ENST00000449971 KCNIP2Q9NS61 270 aa12.48□□□□□ -0.41
FAM3A-216ENST00000449971 MBD2Q9UBB5 411 aa12.48□□□□□ -0.41
FAM3A-216ENST00000449971 HSPG2P98160 4391 aa12.47□□□□□ -0.41
FAM3A-216ENST00000449971 ZNF253O75346 499 aa12.47□□□□□ -0.41
FAM3A-216ENST00000449971 TSPOP30536 169 aa12.47□□□□□ -0.41
FAM3A-216ENST00000449971 MIR17HGQ75NE6 70 aa12.47□□□□□ -0.41
FAM3A-216ENST00000449971 ZNF575Q86XF7 245 aa12.47□□□□□ -0.41
FAM3A-216ENST00000449971 TMEM256Q8N2U0 113 aa12.47□□□□□ -0.41
FAM3A-216ENST00000449971 SCGB1C1Q8TD33 95 aa12.47□□□□□ -0.41
FAM3A-216ENST00000449971 SLC25A2Q9BXI2 301 aa12.47□□□□□ -0.41
FAM3A-216ENST00000449971 PARD6GQ9BYG4 376 aaPredicted RBP12.47□□□□□ -0.41
FAM3A-216ENST00000449971 PTTG1O95997 202 aa12.46□□□□□ -0.41
FAM3A-216ENST00000449971 IFNA5P01569 189 aa12.46□□□□□ -0.41
FAM3A-216ENST00000449971 HTN3P15516 51 aa12.46□□□□□ -0.41
FAM3A-216ENST00000449971 AZU1P20160 251 aa12.46□□□□□ -0.41
FAM3A-216ENST00000449971 DAD1P61803 113 aa12.46□□□□□ -0.41
FAM3A-216ENST00000449971 NDUFB4O95168 129 aa12.45□□□□□ -0.42
FAM3A-216ENST00000449971 TAS2R60P59551 318 aa12.45□□□□□ -0.42
FAM3A-216ENST00000449971 OXA1LQ15070 435 aa12.45□□□□□ -0.42
FAM3A-216ENST00000449971 FAM167A-AS1Q96KT0 104 aa12.45□□□□□ -0.42
FAM3A-216ENST00000449971 NDUFAF3Q9BU61 184 aa12.45□□□□□ -0.42
FAM3A-216ENST00000449971 OR51M1Q9H341 326 aa12.45□□□□□ -0.42
FAM3A-216ENST00000449971 IGLV2-18A0A075B6J9 118 aa12.44□□□□□ -0.42
FAM3A-216ENST00000449971 J3KRW8 73 aa12.44□□□□□ -0.42
FAM3A-216ENST00000449971 M0R3E3 92 aa12.44□□□□□ -0.42
FAM3A-216ENST00000449971 CT45A10P0DMU9 189 aa12.44□□□□□ -0.42
FAM3A-216ENST00000449971 PDE6HQ13956 83 aa12.44□□□□□ -0.42
FAM3A-216ENST00000449971 KIR3DS1Q14943 382 aa12.44□□□□□ -0.42
FAM3A-216ENST00000449971 FFAR4Q5NUL3 377 aa12.44□□□□□ -0.42
FAM3A-216ENST00000449971 EXOC3-AS1Q8N2X6 119 aa12.44□□□□□ -0.42
FAM3A-216ENST00000449971 POM121L12Q8N7R1 296 aa12.44□□□□□ -0.42
FAM3A-216ENST00000449971 MRPL53Q96EL3 112 aaKnown RBP12.44□□□□□ -0.42
FAM3A-216ENST00000449971 MRPL32Q9BYC8 188 aaKnown RBP12.44□□□□□ -0.42
FAM3A-216ENST00000449971 MED28Q9H204 178 aa12.44□□□□□ -0.42
FAM3A-216ENST00000449971 FUT9Q9Y231 359 aa12.44□□□□□ -0.42
FAM3A-216ENST00000449971 PRELID1Q9Y255 219 aa12.44□□□□□ -0.42
FAM3A-216ENST00000449971 NPIPB6E9PJ23 425 aa12.43□□□□□ -0.42
FAM3A-216ENST00000449971 NBEAP1P0C6P0 100 aa12.43□□□□□ -0.42
FAM3A-216ENST00000449971 LEPP41159 167 aa12.43□□□□□ -0.42
FAM3A-216ENST00000449971 ERCC8Q13216 396 aa12.43□□□□□ -0.42
FAM3A-216ENST00000449971 PAXXQ9BUH6 204 aa12.43□□□□□ -0.42
FAM3A-216ENST00000449971 AAMDCQ9H7C9 122 aa12.43□□□□□ -0.42
FAM3A-216ENST00000449971 LYRM9A8MSI8 78 aa12.42□□□□□ -0.42
FAM3A-216ENST00000449971 H7BYZ3 331 aa12.42□□□□□ -0.42
FAM3A-216ENST00000449971 OR10J4P0C629 311 aa12.42□□□□□ -0.42
FAM3A-216ENST00000449971 DEFB130BP0DP73 79 aa12.42□□□□□ -0.42
FAM3A-216ENST00000449971 DEFB130AP0DP74 79 aa12.42□□□□□ -0.42
FAM3A-216ENST00000449971 ICAM4Q14773 271 aa12.42□□□□□ -0.42
FAM3A-216ENST00000449971 FCN2Q15485 313 aa12.42□□□□□ -0.42
FAM3A-216ENST00000449971 GFI1BQ5VTD9 330 aa12.42□□□□□ -0.42
FAM3A-216ENST00000449971 RNF141Q8WVD5 230 aa12.42□□□□□ -0.42
FAM3A-216ENST00000449971 C20orf144Q9BQM9 153 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms