RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 NCBP2LA6PVI3 153 aaKnown RBP13.16□□□□□ -0.3
SNHG17-207ENST00000449469 IGKV2D-40P01614 121 aaPredicted RBP13.16□□□□□ -0.3
SNHG17-207ENST00000449469 NDPQ00604 133 aa13.16□□□□□ -0.3
SNHG17-207ENST00000449469 MUC21Q5SSG8 566 aa13.16□□□□□ -0.3
SNHG17-207ENST00000449469 C11orf71Q6IPW1 123 aa13.16□□□□□ -0.3
SNHG17-207ENST00000449469 CEP250Q9BV73 2442 aa13.15□□□□□ -0.3
SNHG17-207ENST00000449469 SIVA1O15304 175 aa13.15□□□□□ -0.3
SNHG17-207ENST00000449469 CTSGP08311 255 aa13.15□□□□□ -0.3
SNHG17-207ENST00000449469 OR9G4Q8NGQ1 327 aa13.15□□□□□ -0.3
SNHG17-207ENST00000449469 LINC01546A6NGU7 62 aa13.15□□□□□ -0.3
SNHG17-207ENST00000449469 EGR2P11161 476 aaPredicted RBP13.15□□□□□ -0.3
SNHG17-207ENST00000449469 TMEM11P17152 192 aa13.15□□□□□ -0.3
SNHG17-207ENST00000449469 CKS2P33552 79 aa13.15□□□□□ -0.3
SNHG17-207ENST00000449469 PAX8Q06710 450 aa13.15□□□□□ -0.3
SNHG17-207ENST00000449469 C2orf91Q6ZV80 131 aa13.15□□□□□ -0.3
SNHG17-207ENST00000449469 Q6ZVH6 145 aa13.15□□□□□ -0.3
SNHG17-207ENST00000449469 PEF1Q9UBV8 284 aaKnown RBP13.15□□□□□ -0.3
SNHG17-207ENST00000449469 TIMM8BQ9Y5J9 83 aaPredicted RBP13.15□□□□□ -0.3
SNHG17-207ENST00000449469 NHLH1Q02575 133 aa13.14□□□□□ -0.31
SNHG17-207ENST00000449469 BCL6BQ8N143 479 aaPredicted RBP13.14□□□□□ -0.31
SNHG17-207ENST00000449469 OR8A1Q8NGG7 326 aa13.14□□□□□ -0.31
SNHG17-207ENST00000449469 ASCL2Q99929 193 aa13.14□□□□□ -0.31
SNHG17-207ENST00000449469 SLC50A1Q9BRV3 221 aa13.14□□□□□ -0.31
SNHG17-207ENST00000449469 S4R3C0 116 aa13.14□□□□□ -0.31
SNHG17-207ENST00000449469 OR2T8A6NH00 312 aa13.13□□□□□ -0.31
SNHG17-207ENST00000449469 FABP5P3A8MUU1 101 aa13.13□□□□□ -0.31
SNHG17-207ENST00000449469 TWIST1Q15672 202 aa13.13□□□□□ -0.31
SNHG17-207ENST00000449469 FAM110DQ8TAY7 271 aaPredicted RBP13.13□□□□□ -0.31
SNHG17-207ENST00000449469 BOD1L1Q8NFC6 3051 aa13.13□□□□□ -0.31
SNHG17-207ENST00000449469 PCNX1Q96RV3 2341 aa13.13□□□□□ -0.31
SNHG17-207ENST00000449469 TTC28Q96AY4 2481 aa13.13□□□□□ -0.31
SNHG17-207ENST00000449469 TMSB15BA0A087X1C1 80 aa13.13□□□□□ -0.31
SNHG17-207ENST00000449469 CCL21O00585 134 aa13.13□□□□□ -0.31
SNHG17-207ENST00000449469 NCR2O95944 276 aa13.13□□□□□ -0.31
SNHG17-207ENST00000449469 FAM106CPP0CH98 169 aa13.13□□□□□ -0.31
SNHG17-207ENST00000449469 FGF6P10767 208 aa13.13□□□□□ -0.31
SNHG17-207ENST00000449469 PIFOQ8TCI5 191 aa13.13□□□□□ -0.31
SNHG17-207ENST00000449469 IFI27L1Q96BM0 104 aa13.13□□□□□ -0.31
SNHG17-207ENST00000449469 MAP1LC3AQ9H492 121 aa13.13□□□□□ -0.31
SNHG17-207ENST00000449469 ACACAQ13085 2346 aa13.13□□□□□ -0.31
SNHG17-207ENST00000449469 POLEQ07864 2286 aa13.12□□□□□ -0.31
SNHG17-207ENST00000449469 ASPMQ8IZT6 3477 aa13.12□□□□□ -0.31
SNHG17-207ENST00000449469 IGHV7-81A0A0B4J1V7 117 aa13.12□□□□□ -0.31
SNHG17-207ENST00000449469 LOC389332A0A1B0GUA5 103 aa13.12□□□□□ -0.31
SNHG17-207ENST00000449469 TMEM97Q5BJF2 176 aa13.12□□□□□ -0.31
SNHG17-207ENST00000449469 BOD1L2Q8IYS8 172 aa13.12□□□□□ -0.31
SNHG17-207ENST00000449469 MCRIP2Q9BUT9 160 aaKnown RBP13.12□□□□□ -0.31
SNHG17-207ENST00000449469 TP73-AS1Q9UF72 201 aa13.12□□□□□ -0.31
SNHG17-207ENST00000449469 ABCA1O95477 2261 aa13.12□□□□□ -0.31
SNHG17-207ENST00000449469 GRNP28799 593 aaKnown RBP13.12□□□□□ -0.31
SNHG17-207ENST00000449469 CDKN1BP46527 198 aa13.12□□□□□ -0.31
SNHG17-207ENST00000449469 COL25A1Q9BXS0 654 aaPredicted RBP13.12□□□□□ -0.31
SNHG17-207ENST00000449469 NXT2Q9NPJ8 142 aaKnown RBP13.12□□□□□ -0.31
SNHG17-207ENST00000449469 SMAD5-AS1Q9Y6J3 95 aa13.12□□□□□ -0.31
SNHG17-207ENST00000449469 A6NDN8 102 aa13.11□□□□□ -0.31
SNHG17-207ENST00000449469 FAM106AQ4KMX7 169 aa13.11□□□□□ -0.31
SNHG17-207ENST00000449469 OR4X2Q8NGF9 303 aa13.11□□□□□ -0.31
SNHG17-207ENST00000449469 ZNF502Q8TBZ5 544 aa13.11□□□□□ -0.31
SNHG17-207ENST00000449469 MRPL53Q96EL3 112 aaKnown RBP13.11□□□□□ -0.31
SNHG17-207ENST00000449469 APC2O95996 2303 aa13.11□□□□□ -0.31
SNHG17-207ENST00000449469 IGHG4P01861 327 aa13.1□□□□□ -0.31
SNHG17-207ENST00000449469 RBX1P62877 108 aa13.1□□□□□ -0.31
SNHG17-207ENST00000449469 LOXL1Q08397 574 aaPredicted RBP13.1□□□□□ -0.31
SNHG17-207ENST00000449469 DTX2Q86UW9 622 aa13.1□□□□□ -0.31
SNHG17-207ENST00000449469 RNASE8Q8TDE3 154 aaKnown RBP13.1□□□□□ -0.31
SNHG17-207ENST00000449469 VGLL1Q99990 258 aa13.1□□□□□ -0.31
SNHG17-207ENST00000449469 SMAD7O15105 426 aaKnown RBP13.1□□□□□ -0.31
SNHG17-207ENST00000449469 GOSR1O95249 250 aa13.1□□□□□ -0.31
SNHG17-207ENST00000449469 NPYP01303 97 aa13.1□□□□□ -0.31
SNHG17-207ENST00000449469 CACNG7P62955 275 aa13.1□□□□□ -0.31
SNHG17-207ENST00000449469 HSD52Q0P140 79 aa13.1□□□□□ -0.31
SNHG17-207ENST00000449469 Q8N9W7 124 aa13.1□□□□□ -0.31
SNHG17-207ENST00000449469 HIF1ANQ9NWT6 349 aa13.1□□□□□ -0.31
SNHG17-207ENST00000449469 ZNF80P51504 273 aaPredicted RBP13.09□□□□□ -0.31
SNHG17-207ENST00000449469 UCNP55089 124 aa13.09□□□□□ -0.31
SNHG17-207ENST00000449469 FOXC1Q12948 553 aa13.09□□□□□ -0.31
SNHG17-207ENST00000449469 DYNAPQ8N1N2 210 aa13.09□□□□□ -0.31
SNHG17-207ENST00000449469 Q8TAT8 98 aa13.09□□□□□ -0.31
SNHG17-207ENST00000449469 MSRB2Q9Y3D2 182 aa13.09□□□□□ -0.31
SNHG17-207ENST00000449469 MAP1BP46821 2468 aaKnown RBP13.09□□□□□ -0.31
SNHG17-207ENST00000449469 LY6HO94772 140 aa13.09□□□□□ -0.31
SNHG17-207ENST00000449469 ORM1P02763 201 aa13.09□□□□□ -0.31
SNHG17-207ENST00000449469 ANKRD39Q53RE8 183 aa13.09□□□□□ -0.31
SNHG17-207ENST00000449469 ATP6V0BQ99437 205 aa13.09□□□□□ -0.31
SNHG17-207ENST00000449469 SIRPDQ9H106 197 aa13.09□□□□□ -0.31
SNHG17-207ENST00000449469 ZFAND3Q9H8U3 227 aa13.09□□□□□ -0.31
SNHG17-207ENST00000449469 C7orf71A4D174 169 aa13.08□□□□□ -0.32
SNHG17-207ENST00000449469 BUB3O43684 328 aa13.08□□□□□ -0.32
SNHG17-207ENST00000449469 PIP4P2Q8N4L2 257 aa13.08□□□□□ -0.32
SNHG17-207ENST00000449469 RNF185Q96GF1 192 aa13.08□□□□□ -0.32
SNHG17-207ENST00000449469 BSNQ9UPA5 3926 aa13.08□□□□□ -0.32
SNHG17-207ENST00000449469 A0A1W2PRD5 423 aa13.07□□□□□ -0.32
SNHG17-207ENST00000449469 A0A1W2PRF3 423 aa13.07□□□□□ -0.32
SNHG17-207ENST00000449469 A0A1W2PRM7 423 aa13.07□□□□□ -0.32
SNHG17-207ENST00000449469 A1L4Q6 167 aa13.07□□□□□ -0.32
SNHG17-207ENST00000449469 H3BRM9 83 aa13.07□□□□□ -0.32
SNHG17-207ENST00000449469 IGHV3-23P01764 117 aa13.07□□□□□ -0.32
SNHG17-207ENST00000449469 PSMG3-AS1Q96PY0 264 aa13.07□□□□□ -0.32
SNHG17-207ENST00000449469 CBY3A6NI87 242 aa13.07□□□□□ -0.32
SNHG17-207ENST00000449469 NDUFS7O75251 213 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms