RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PEA15Q15121 130 aa10.95□□□□□ -0.66
TNF-208ENST00000449264 PSMG4Q5JS54 123 aa10.95□□□□□ -0.66
TNF-208ENST00000449264 PRR31Q5SQ13 230 aa10.95□□□□□ -0.66
TNF-208ENST00000449264 SLC7A5P1Q8MH63 180 aa10.95□□□□□ -0.66
TNF-208ENST00000449264 C5orf17Q8NAS9 161 aa10.95□□□□□ -0.66
TNF-208ENST00000449264 ZNF738Q8NE65 137 aa10.95□□□□□ -0.66
TNF-208ENST00000449264 CSN1S1P47710 185 aa10.95□□□□□ -0.66
TNF-208ENST00000449264 PSG3Q16557 428 aa10.95□□□□□ -0.66
TNF-208ENST00000449264 CCDC28AQ8IWP9 274 aa10.95□□□□□ -0.66
TNF-208ENST00000449264 TXNDC17Q9BRA2 123 aa10.95□□□□□ -0.66
TNF-208ENST00000449264 TRAV2A0A0B4J234 112 aa10.94□□□□□ -0.66
TNF-208ENST00000449264 C9JQL5 133 aa10.94□□□□□ -0.66
TNF-208ENST00000449264 PDE6DO43924 150 aa10.94□□□□□ -0.66
TNF-208ENST00000449264 DEFB1P60022 68 aa10.94□□□□□ -0.66
TNF-208ENST00000449264 ZNF256Q9Y2P7 627 aaPredicted RBP10.94□□□□□ -0.66
TNF-208ENST00000449264 PEX7O00628 323 aa10.93□□□□□ -0.66
TNF-208ENST00000449264 KRTAP21-3Q3LHN1 58 aa10.93□□□□□ -0.66
TNF-208ENST00000449264 OXLD1Q5BKU9 147 aa10.93□□□□□ -0.66
TNF-208ENST00000449264 GOLT1AQ6ZVE7 132 aa10.93□□□□□ -0.66
TNF-208ENST00000449264 CYB561D1Q8N8Q1 229 aa10.93□□□□□ -0.66
TNF-208ENST00000449264 RPUSD4Q96CM3 377 aaKnown RBP10.93□□□□□ -0.66
TNF-208ENST00000449264 CITED4Q96RK1 184 aa10.93□□□□□ -0.66
TNF-208ENST00000449264 CLEC5AQ9NY25 188 aa10.93□□□□□ -0.66
TNF-208ENST00000449264 EPDR1Q9UM22 224 aa10.93□□□□□ -0.66
TNF-208ENST00000449264 PRELID1Q9Y255 219 aa10.93□□□□□ -0.66
TNF-208ENST00000449264 IGKV2-40A0A087WW87 121 aaPredicted RBP10.92□□□□□ -0.66
TNF-208ENST00000449264 PRAC2D3DTV9 90 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 F6UZH7 168 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 IGKV2D-40P01614 121 aaPredicted RBP10.92□□□□□ -0.66
TNF-208ENST00000449264 TCRAP04437 139 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 SRP19P09132 144 aaKnown RBP10.92□□□□□ -0.66
TNF-208ENST00000449264 DEFB131AP59861 70 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 NDUFA5Q16718 116 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 ATG101Q9BSB4 218 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 GPR61Q9BZJ8 451 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 MAP6D1Q9H9H5 199 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 MGAM2Q2M2H8 2515 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 DIRC3C9JPN6 131 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 F6UB75 175 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 AKR1C3P42330 323 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 UQCC3Q6UW78 93 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 HIST1H2BAQ96A08 127 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 MRPL53Q96EL3 112 aaKnown RBP10.92□□□□□ -0.66
TNF-208ENST00000449264 SGK494Q96LW2 274 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 TCEAL7Q9BRU2 100 aa10.92□□□□□ -0.66
TNF-208ENST00000449264 AGRNO00468 2067 aa10.91□□□□□ -0.66
TNF-208ENST00000449264 SFTA3P0C7M3 94 aa10.91□□□□□ -0.66
TNF-208ENST00000449264 ZNF705DP0CH99 300 aaPredicted RBP10.91□□□□□ -0.66
TNF-208ENST00000449264 ZNF705BP0CI00 300 aaPredicted RBP10.91□□□□□ -0.66
TNF-208ENST00000449264 ZNF674Q2M3X9 581 aa10.91□□□□□ -0.66
TNF-208ENST00000449264 ODF3L2Q3SX64 289 aa10.91□□□□□ -0.66
TNF-208ENST00000449264 C11orf52Q96A22 123 aa10.91□□□□□ -0.66
TNF-208ENST00000449264 DERL1Q9BUN8 251 aa10.91□□□□□ -0.66
TNF-208ENST00000449264 SMDT1Q9H4I9 107 aa10.91□□□□□ -0.66
TNF-208ENST00000449264 TRAV8-1A0A0A6YYK1 113 aa10.9□□□□□ -0.66
TNF-208ENST00000449264 TRAV34A0A0B4J273 112 aa10.9□□□□□ -0.66
TNF-208ENST00000449264 TMEM250H0YL14 139 aa10.9□□□□□ -0.66
TNF-208ENST00000449264 CD7P09564 240 aa10.9□□□□□ -0.66
TNF-208ENST00000449264 ZNF124Q15973 351 aa10.9□□□□□ -0.66
TNF-208ENST00000449264 APRG1Q8IVJ8 170 aa10.9□□□□□ -0.66
TNF-208ENST00000449264 EIF4E3Q8N5X7 224 aaKnown RBP10.9□□□□□ -0.66
TNF-208ENST00000449264 LINC00479Q96M42 142 aa10.9□□□□□ -0.66
TNF-208ENST00000449264 SLC35B3Q9H1N7 401 aa10.9□□□□□ -0.66
TNF-208ENST00000449264 OR11H12B2RN74 326 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 K7EQM0 130 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 WIPF1O43516 503 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 CNN1P51911 297 aaKnown RBP10.89□□□□□ -0.67
TNF-208ENST00000449264 HIST1H1AQ02539 215 aaPredicted RBP10.89□□□□□ -0.67
TNF-208ENST00000449264 BEAN1Q3B7T3 259 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 C2CD4CQ8TF44 421 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 NOTCH1P46531 2555 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 G3V4G9 280 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 RPL35P42766 123 aaKnown RBP10.89□□□□□ -0.67
TNF-208ENST00000449264 UBE2G1P62253 170 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 ERCC8Q13216 396 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 GDF5OSQ5U4N7 250 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 GTSCR1Q86UQ5 136 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 OR8A1Q8NGG7 326 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 OR10J6PQ8NGY7 276 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 ASCL2Q99929 193 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 VGLL1Q99990 258 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 WFDC10AQ9H1F0 79 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 PARLQ9H300 379 aa10.89□□□□□ -0.67
TNF-208ENST00000449264 DNHD1Q96M86 4753 aa10.88□□□□□ -0.67
TNF-208ENST00000449264 KNCNA6PVL3 124 aa10.88□□□□□ -0.67
TNF-208ENST00000449264 ACTL10Q5JWF8 245 aa10.88□□□□□ -0.67
TNF-208ENST00000449264 EBLN2Q6P2I7 272 aa10.88□□□□□ -0.67
TNF-208ENST00000449264 Q8TAT8 98 aa10.88□□□□□ -0.67
TNF-208ENST00000449264 SERTM2A0A1B0GWG4 89 aa10.87□□□□□ -0.67
TNF-208ENST00000449264 SOHLH1Q5JUK2 328 aa10.87□□□□□ -0.67
TNF-208ENST00000449264 FOXI2Q6ZQN5 318 aa10.87□□□□□ -0.67
TNF-208ENST00000449264 ARL6IP6Q8N6S5 226 aa10.87□□□□□ -0.67
TNF-208ENST00000449264 TMEM75Q8N9X5 138 aa10.87□□□□□ -0.67
TNF-208ENST00000449264 SMIM7Q9BQ49 75 aa10.87□□□□□ -0.67
TNF-208ENST00000449264 SAV1Q9H4B6 383 aaPredicted RBP10.87□□□□□ -0.67
TNF-208ENST00000449264 NBEAL1Q6ZS30 2694 aa10.87□□□□□ -0.67
TNF-208ENST00000449264 A0A0J9YX75 114 aa10.86□□□□□ -0.67
TNF-208ENST00000449264 TMEM218A2RU14 115 aa10.86□□□□□ -0.67
TNF-208ENST00000449264 NDUFS6O75380 124 aaKnown RBP10.86□□□□□ -0.67
TNF-208ENST00000449264 IGKV3-20P01619 116 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms