RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 PEX7O00628 323 aa14.45□□□□□ -0.1
RPS28-202ENST00000449223 WIPF1O43516 503 aa14.45□□□□□ -0.1
RPS28-202ENST00000449223 TCRAP04437 139 aa14.45□□□□□ -0.1
RPS28-202ENST00000449223 ID1P41134 155 aa14.45□□□□□ -0.1
RPS28-202ENST00000449223 PSG3Q16557 428 aa14.45□□□□□ -0.1
RPS28-202ENST00000449223 SPATA3Q8NHX4 192 aa14.45□□□□□ -0.1
RPS28-202ENST00000449223 CMTM2Q8TAZ6 248 aa14.45□□□□□ -0.1
RPS28-202ENST00000449223 SELENOKQ9Y6D0 94 aa14.45□□□□□ -0.1
RPS28-202ENST00000449223 IGKV3-7A0A075B6H7 116 aa14.44□□□□□ -0.1
RPS28-202ENST00000449223 SFTA3P0C7M3 94 aa14.44□□□□□ -0.1
RPS28-202ENST00000449223 C9orf66Q5T8R8 295 aa14.44□□□□□ -0.1
RPS28-202ENST00000449223 GBGT1Q8N5D6 347 aa14.44□□□□□ -0.1
RPS28-202ENST00000449223 KLF12Q9Y4X4 402 aa14.44□□□□□ -0.1
RPS28-202ENST00000449223 DIRC3C9JPN6 131 aa14.43□□□□□ -0.1
RPS28-202ENST00000449223 DNASE2O00115 360 aaPredicted RBP14.43□□□□□ -0.1
RPS28-202ENST00000449223 CD33P20138 364 aa14.43□□□□□ -0.1
RPS28-202ENST00000449223 HLA-DMBP28068 263 aa14.43□□□□□ -0.1
RPS28-202ENST00000449223 CSN1S1P47710 185 aa14.43□□□□□ -0.1
RPS28-202ENST00000449223 LCN12Q6JVE5 192 aa14.43□□□□□ -0.1
RPS28-202ENST00000449223 RNF182Q8N6D2 247 aa14.43□□□□□ -0.1
RPS28-202ENST00000449223 ZNF256Q9Y2P7 627 aaPredicted RBP14.43□□□□□ -0.1
RPS28-202ENST00000449223 SNRPD3P62318 126 aaKnown RBP14.42□□□□□ -0.1
RPS28-202ENST00000449223 GNG5P63218 68 aa14.42□□□□□ -0.1
RPS28-202ENST00000449223 IGFL4Q6B9Z1 124 aa14.42□□□□□ -0.1
RPS28-202ENST00000449223 C20orf173Q96LM9 149 aa14.42□□□□□ -0.1
RPS28-202ENST00000449223 RBAKDNA6NC62 111 aa14.41□□□□□ -0.1
RPS28-202ENST00000449223 IZUMO1RA6ND01 250 aa14.41□□□□□ -0.1
RPS28-202ENST00000449223 OR4C46A6NHA9 309 aa14.41□□□□□ -0.1
RPS28-202ENST00000449223 KRBOX1C9JBD0 128 aa14.41□□□□□ -0.1
RPS28-202ENST00000449223 SOHLH1Q5JUK2 328 aa14.41□□□□□ -0.1
RPS28-202ENST00000449223 C10orf91Q5T1B1 145 aa14.41□□□□□ -0.1
RPS28-202ENST00000449223 SEC11CQ9BY50 192 aa14.41□□□□□ -0.1
RPS28-202ENST00000449223 PARLQ9H300 379 aa14.41□□□□□ -0.1
RPS28-202ENST00000449223 ADCYAP1P18509 176 aa14.41□□□□□ -0.1
RPS28-202ENST00000449223 FAM74A3Q4VXF1 159 aa14.41□□□□□ -0.1
RPS28-202ENST00000449223 FAM24BQ8N5W8 94 aa14.41□□□□□ -0.1
RPS28-202ENST00000449223 FBLL1A6NHQ2 334 aaKnown RBP14.4□□□□□ -0.1
RPS28-202ENST00000449223 S100A9P06702 114 aaKnown RBP14.4□□□□□ -0.1
RPS28-202ENST00000449223 TMEM183BQ1AE95 376 aa14.4□□□□□ -0.1
RPS28-202ENST00000449223 KRTAP21-3Q3LHN1 58 aa14.4□□□□□ -0.1
RPS28-202ENST00000449223 WFDC3Q8IUB2 231 aa14.4□□□□□ -0.1
RPS28-202ENST00000449223 TMEM75Q8N9X5 138 aa14.4□□□□□ -0.1
RPS28-202ENST00000449223 DERL1Q9BUN8 251 aa14.4□□□□□ -0.1
RPS28-202ENST00000449223 TRBV6-1A0A0K0K1D8 114 aa14.39□□□□□ -0.11
RPS28-202ENST00000449223 ZNF705FA8MVS1 300 aaPredicted RBP14.39□□□□□ -0.11
RPS28-202ENST00000449223 K7EQM0 130 aa14.39□□□□□ -0.11
RPS28-202ENST00000449223 IGLV2-11P01706 119 aa14.39□□□□□ -0.11
RPS28-202ENST00000449223 AKR1C3P42330 323 aa14.39□□□□□ -0.11
RPS28-202ENST00000449223 RPL35P42766 123 aaKnown RBP14.39□□□□□ -0.11
RPS28-202ENST00000449223 TFPI2P48307 235 aa14.39□□□□□ -0.11
RPS28-202ENST00000449223 CNN1P51911 297 aaKnown RBP14.39□□□□□ -0.11
RPS28-202ENST00000449223 GOLT1AQ6ZVE7 132 aa14.39□□□□□ -0.11
RPS28-202ENST00000449223 FMC1Q96HJ9 113 aa14.39□□□□□ -0.11
RPS28-202ENST00000449223 FAM110AQ9BQ89 295 aa14.39□□□□□ -0.11
RPS28-202ENST00000449223 NOTCH3Q9UM47 2321 aa14.39□□□□□ -0.11
RPS28-202ENST00000449223 C9JCJ5 164 aa14.38□□□□□ -0.11
RPS28-202ENST00000449223 ATP6V1G1O75348 118 aa14.38□□□□□ -0.11
RPS28-202ENST00000449223 TAS2R60P59551 318 aa14.38□□□□□ -0.11
RPS28-202ENST00000449223 BEAN1Q3B7T3 259 aa14.38□□□□□ -0.11
RPS28-202ENST00000449223 CARHSP1Q9Y2V2 147 aaKnown RBP14.38□□□□□ -0.11
RPS28-202ENST00000449223 PKD1L1Q8TDX9 2849 aa14.37□□□□□ -0.11
RPS28-202ENST00000449223 SORL1Q92673 2214 aa14.37□□□□□ -0.11
RPS28-202ENST00000449223 TRBV20OR9-2A0A075B6H5 130 aa14.37□□□□□ -0.11
RPS28-202ENST00000449223 PRAC2D3DTV9 90 aa14.37□□□□□ -0.11
RPS28-202ENST00000449223 ZNF688P0C7X2 276 aa14.37□□□□□ -0.11
RPS28-202ENST00000449223 ZNF738Q8NE65 137 aa14.37□□□□□ -0.11
RPS28-202ENST00000449223 LINC00479Q96M42 142 aa14.37□□□□□ -0.11
RPS28-202ENST00000449223 LINC00052Q96N35 136 aa14.37□□□□□ -0.11
RPS28-202ENST00000449223 SMIM7Q9BQ49 75 aa14.37□□□□□ -0.11
RPS28-202ENST00000449223 GPR61Q9BZJ8 451 aa14.37□□□□□ -0.11
RPS28-202ENST00000449223 PPP1R14DQ9NXH3 145 aa14.37□□□□□ -0.11
RPS28-202ENST00000449223 F8W036 122 aa14.36□□□□□ -0.11
RPS28-202ENST00000449223 CEBPGP53567 150 aa14.36□□□□□ -0.11
RPS28-202ENST00000449223 PSMG4Q5JS54 123 aa14.36□□□□□ -0.11
RPS28-202ENST00000449223 PRR31Q5SQ13 230 aa14.36□□□□□ -0.11
RPS28-202ENST00000449223 C9orf47Q6ZRZ4 202 aa14.36□□□□□ -0.11
RPS28-202ENST00000449223 IGF2BP2-AS1Q96M15 143 aa14.36□□□□□ -0.11
RPS28-202ENST00000449223 RPH3ALQ9UNE2 315 aa14.36□□□□□ -0.11
RPS28-202ENST00000449223 IGKV2-40A0A087WW87 121 aaPredicted RBP14.36□□□□□ -0.11
RPS28-202ENST00000449223 ZNF727A8MUV8 499 aa14.36□□□□□ -0.11
RPS28-202ENST00000449223 IGKV2D-40P01614 121 aaPredicted RBP14.36□□□□□ -0.11
RPS28-202ENST00000449223 GUCA2BQ16661 112 aa14.36□□□□□ -0.11
RPS28-202ENST00000449223 SMIM12Q96EX1 92 aa14.36□□□□□ -0.11
RPS28-202ENST00000449223 MAP6D1Q9H9H5 199 aa14.36□□□□□ -0.11
RPS28-202ENST00000449223 LY96Q9Y6Y9 160 aa14.36□□□□□ -0.11
RPS28-202ENST00000449223 NPIPB6E9PJ23 425 aa14.35□□□□□ -0.11
RPS28-202ENST00000449223 LTAP01374 205 aa14.35□□□□□ -0.11
RPS28-202ENST00000449223 IGLL1P15814 213 aa14.35□□□□□ -0.11
RPS28-202ENST00000449223 CMC4P56277 68 aaPredicted RBP14.35□□□□□ -0.11
RPS28-202ENST00000449223 UBE2G1P62253 170 aa14.35□□□□□ -0.11
RPS28-202ENST00000449223 ODF3L2Q3SX64 289 aa14.35□□□□□ -0.11
RPS28-202ENST00000449223 OR8A1Q8NGG7 326 aa14.35□□□□□ -0.11
RPS28-202ENST00000449223 NIPSNAP3BQ9BS92 247 aa14.35□□□□□ -0.11
RPS28-202ENST00000449223 TRAV8-1A0A0A6YYK1 113 aa14.34□□□□□ -0.11
RPS28-202ENST00000449223 TRAV34A0A0B4J273 112 aa14.34□□□□□ -0.11
RPS28-202ENST00000449223 FLI1Q01543 452 aaPredicted RBP14.34□□□□□ -0.11
RPS28-202ENST00000449223 ZNF674Q2M3X9 581 aa14.34□□□□□ -0.11
RPS28-202ENST00000449223 FOXI2Q6ZQN5 318 aa14.34□□□□□ -0.11
RPS28-202ENST00000449223 Q86TA4 180 aa14.34□□□□□ -0.11
RPS28-202ENST00000449223 VGLL1Q99990 258 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms