RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 FAM181AQ8N9Y4 354 aa7.34□□□□□ -1.24
NIPBL-202ENST00000448238 E9PQ18 207 aa7.33□□□□□ -1.24
NIPBL-202ENST00000448238 EXOC3-AS1Q8N2X6 119 aa7.33□□□□□ -1.24
NIPBL-202ENST00000448238 HELZP42694 1942 aaKnown RBP7.33□□□□□ -1.24
NIPBL-202ENST00000448238 RS1O15537 224 aa7.33□□□□□ -1.24
NIPBL-202ENST00000448238 BUB3O43684 328 aa7.33□□□□□ -1.24
NIPBL-202ENST00000448238 MORN2Q502X0 79 aa7.33□□□□□ -1.24
NIPBL-202ENST00000448238 NTN5Q8WTR8 489 aaPredicted RBP7.33□□□□□ -1.24
NIPBL-202ENST00000448238 TNRC6BQ9UPQ9 1833 aaKnown RBP7.33□□□□□ -1.24
NIPBL-202ENST00000448238 IGLV1-36A0A0B4J1U3 117 aa7.33□□□□□ -1.24
NIPBL-202ENST00000448238 SMIM27A0A1W2PRY6 76 aa7.33□□□□□ -1.24
NIPBL-202ENST00000448238 Q8N8P6 123 aa7.33□□□□□ -1.24
NIPBL-202ENST00000448238 A0A0U1RQV1 116 aa7.33□□□□□ -1.24
NIPBL-202ENST00000448238 COLCA2A8K830 154 aa7.33□□□□□ -1.24
NIPBL-202ENST00000448238 J3QQQ9 107 aa7.33□□□□□ -1.24
NIPBL-202ENST00000448238 C1orf53Q5VUE5 145 aa7.33□□□□□ -1.24
NIPBL-202ENST00000448238 TRBV12-3P01733 135 aa7.33□□□□□ -1.24
NIPBL-202ENST00000448238 ANGP03950 147 aaKnown RBP7.33□□□□□ -1.24
NIPBL-202ENST00000448238 NMSQ5H8A3 153 aa7.33□□□□□ -1.24
NIPBL-202ENST00000448238 TRBV6-7A0A0A0MS04 114 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 H0YIZ8 118 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 NXPH4O95158 308 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 ATRAIDQ6UW56 229 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 BMPERQ8N8U9 685 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 DEPPQ9NTK1 212 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 PSME4Q14997 1843 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 IGHV1-45A0A0A0MS14 117 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 C17orf100A8MU93 164 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 C2orf16Q68DN1 1984 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 SRSF7Q16629 238 aaKnown RBP eCLIP7.32□□□□□ -1.24
NIPBL-202ENST00000448238 TEN1Q86WV5 123 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 TMEM75Q8N9X5 138 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 ZMAT4Q9H898 229 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 DAZ1Q9NQZ3 744 aaKnown RBP7.32□□□□□ -1.24
NIPBL-202ENST00000448238 WDR83OSQ9Y284 106 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 LOC285556D6RIA3 1793 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 H0Y9J4 135 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 NTN3O00634 580 aaPredicted RBP7.32□□□□□ -1.24
NIPBL-202ENST00000448238 SLC25A29Q8N8R3 303 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 MPLKIPQ8TAP9 179 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 RTBDNQ9BSG5 229 aaPredicted RBP7.32□□□□□ -1.24
NIPBL-202ENST00000448238 RGPD2P0DJD1 1756 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 IGHV1OR15-1A0A075B7D0 117 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 A0A087WWL8 130 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 CFC1BP0CG36 223 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 CFC1P0CG37 223 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 ZNF497Q6ZNH5 498 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 CRYBA2P53672 197 aa7.32□□□□□ -1.24
NIPBL-202ENST00000448238 MRPL36Q9P0J6 103 aaKnown RBP7.32□□□□□ -1.24
NIPBL-202ENST00000448238 IGHV4-28A0A0C4DH34 117 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 PSPNO60542 156 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 PRB1P04280 392 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 CXCL1P09341 107 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 BSPH1Q075Z2 132 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 A0A0G2JK05 382 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 CCL4P13236 92 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 SH2D6Q7Z4S9 175 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 KIR2DL5BQ8NHK3 375 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 TIMM17AQ99595 171 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 RNF126Q9BV68 326 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 C2CD3Q4AC94 2353 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 PRSS46E5RG02 174 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 RPL15P61313 204 aaKnown RBP7.31□□□□□ -1.24
NIPBL-202ENST00000448238 COX6A1P12074 109 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 SIGLEC8Q9NYZ4 499 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 UQCRQO14949 82 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 Q5BKY6 102 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 ZNF493Q6ZR52 646 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 PCNX3Q9H6A9 2034 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 PRR19A6NJB7 356 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 NDUFB8O95169 186 aa7.31□□□□□ -1.24
NIPBL-202ENST00000448238 CD55P08174 381 aa7.3□□□□□ -1.24
NIPBL-202ENST00000448238 C1orf195Q5TG92 126 aa7.3□□□□□ -1.24
NIPBL-202ENST00000448238 CDCP2Q5VXM1 449 aa7.3□□□□□ -1.24
NIPBL-202ENST00000448238 Q6ZUT4 128 aa7.3□□□□□ -1.24
NIPBL-202ENST00000448238 M0R1W7 72 aa7.3□□□□□ -1.24
NIPBL-202ENST00000448238 FGF16O43320 207 aa7.3□□□□□ -1.24
NIPBL-202ENST00000448238 RNF183Q96D59 192 aa7.3□□□□□ -1.24
NIPBL-202ENST00000448238 KIDINS220Q9ULH0 1771 aa7.3□□□□□ -1.24
NIPBL-202ENST00000448238 LRP6O75581 1613 aa7.3□□□□□ -1.24
NIPBL-202ENST00000448238 UBE2E1P51965 193 aa7.3□□□□□ -1.24
NIPBL-202ENST00000448238 ZFP36L1Q07352 338 aaKnown RBP7.3□□□□□ -1.24
NIPBL-202ENST00000448238 C9orf47Q6ZRZ4 202 aa7.3□□□□□ -1.24
NIPBL-202ENST00000448238 ARMS2P0C7Q2 107 aa7.3□□□□□ -1.24
NIPBL-202ENST00000448238 LINC00527Q9UJ94 153 aa7.3□□□□□ -1.24
NIPBL-202ENST00000448238 NDUFS6O75380 124 aaKnown RBP7.3□□□□□ -1.24
NIPBL-202ENST00000448238 CRYGBP07316 175 aa7.3□□□□□ -1.24
NIPBL-202ENST00000448238 PFN1P07737 140 aaKnown RBP7.3□□□□□ -1.24
NIPBL-202ENST00000448238 TREML4Q6UXN2 200 aa7.3□□□□□ -1.24
NIPBL-202ENST00000448238 RBBP6Q7Z6E9 1792 aaKnown RBP7.3□□□□□ -1.24
NIPBL-202ENST00000448238 SDHAF1A6NFY7 115 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 RHOHQ15669 191 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 PIP4P2Q8N4L2 257 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 FAM236DA0A1B0GTK5 79 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 HRKO00198 91 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 FAM236CP0DP71 79 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 MRPL23Q16540 153 aaKnown RBP7.29□□□□□ -1.24
NIPBL-202ENST00000448238 C12orf74Q32Q52 190 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 C3orf56Q8N813 242 aa7.29□□□□□ -1.24
NIPBL-202ENST00000448238 KLHL30-AS1Q8NEE0 82 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms