RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 CD69Q07108 199 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 VWC2Q2TAL6 325 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 SRSF2Q01130 221 aaKnown RBP7.55□□□□□ -1.2
SMC6-207ENST00000448223 NMSQ5H8A3 153 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 ZIC4Q8N9L1 334 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 EEF1AKMT3Q96AZ1 226 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 PEMTQ9UBM1 199 aa7.55□□□□□ -1.2
SMC6-207ENST00000448223 NUP210LQ5VU65 1888 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 TRAV12-1A0A0B4J245 112 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 IFNL4K9M1U5 179 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 RBX1P62877 108 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 C16orf54Q6UWD8 224 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 IGHV3-49A0A0A0MS15 119 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 C15orf61A6NNL5 157 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 IGLL5B9A064 214 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 TAX1BP3O14907 124 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 DUTP33316 252 aaKnown RBP7.54□□□□□ -1.2
SMC6-207ENST00000448223 ATP1A1-AS1Q5TC04 95 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 GFRA4Q9GZZ7 299 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 IGHV3-66A0A0C4DH42 116 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 SMKR1H3BMG3 65 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 CD7P09564 240 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 COX6A1P12074 109 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 NTF4P34130 210 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 RSPO1Q2MKA7 263 aaPredicted RBP7.54□□□□□ -1.2
SMC6-207ENST00000448223 CT55Q8WUE5 264 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 SLC50A1Q9BRV3 221 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 TRGV8A0A0C4DH27 118 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 LINC00205P59089 165 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 TMEM14EPQ6UXP3 125 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 C21orf62Q9NYP8 219 aa7.54□□□□□ -1.2
SMC6-207ENST00000448223 SPTBN5Q9NRC6 3674 aaKnown RBP7.53□□□□□ -1.2
SMC6-207ENST00000448223 CCL8P80075 99 aa7.53□□□□□ -1.2
SMC6-207ENST00000448223 VCYO14598 125 aa7.53□□□□□ -1.2
SMC6-207ENST00000448223 MORN2Q502X0 79 aa7.53□□□□□ -1.2
SMC6-207ENST00000448223 ANAPC10Q9UM13 185 aa7.53□□□□□ -1.2
SMC6-207ENST00000448223 DOPEY2Q9Y3R5 2298 aa7.53□□□□□ -1.2
SMC6-207ENST00000448223 AHRRA9YTQ3 701 aa7.53□□□□□ -1.2
SMC6-207ENST00000448223 PRB4P10163 310 aaPredicted RBP7.53□□□□□ -1.2
SMC6-207ENST00000448223 SUMO4Q6EEV6 95 aa7.53□□□□□ -1.2
SMC6-207ENST00000448223 ITLN1Q8WWA0 313 aa7.53□□□□□ -1.2
SMC6-207ENST00000448223 ARRDC1-AS1Q9H2J1 176 aa7.53□□□□□ -1.2
SMC6-207ENST00000448223 IL11RAQ14626 422 aa7.53□□□□□ -1.2
SMC6-207ENST00000448223 FRYQ5TBA9 3013 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 A0A1W2PPI3 338 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 SAP25Q8TEE9 199 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 S4R3C0 116 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 PINLYPA6NC86 204 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 SRSF7Q16629 238 aaKnown RBP eCLIP7.52□□□□□ -1.21
SMC6-207ENST00000448223 PVRIGQ6DKI7 326 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 PRIMA1Q86XR5 153 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 LYPD6BQ8NI32 183 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 RNF125Q96EQ8 232 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 PCNX2A6NKB5 2137 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 CD3EP07766 207 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 PMS2CLQ68D20 193 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 ACP7Q6ZNF0 438 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 TNCP24821 2201 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 A0A0G2JRQ6 117 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 FAM90A9PA6NNJ1 464 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 PRR33A8MZF0 331 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 IGLV3-19P01714 112 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 IL15RAQ13261 267 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 TDRG1Q3Y452 100 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 C8orf46Q8TAG6 207 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 RCHY1Q96PM5 261 aa7.52□□□□□ -1.21
SMC6-207ENST00000448223 NDUFV3P56181 108 aaKnown RBP7.51□□□□□ -1.21
SMC6-207ENST00000448223 LY6G5BQ8NDX9 201 aa7.51□□□□□ -1.21
SMC6-207ENST00000448223 FAM57AQ8TBR7 257 aa7.51□□□□□ -1.21
SMC6-207ENST00000448223 TMEM54Q969K7 222 aa7.51□□□□□ -1.21
SMC6-207ENST00000448223 DUX3Q96PT4 197 aa7.51□□□□□ -1.21
SMC6-207ENST00000448223 SPG11Q96JI7 2443 aa7.51□□□□□ -1.21
SMC6-207ENST00000448223 PRB3Q04118 309 aaPredicted RBP7.51□□□□□ -1.21
SMC6-207ENST00000448223 DCTN5Q9BTE1 182 aa7.51□□□□□ -1.21
SMC6-207ENST00000448223 IGHV3-23P01764 117 aa7.51□□□□□ -1.21
SMC6-207ENST00000448223 RPL32P62910 135 aaKnown RBP7.51□□□□□ -1.21
SMC6-207ENST00000448223 DPH3Q96FX2 82 aa7.51□□□□□ -1.21
SMC6-207ENST00000448223 NBEAQ8NFP9 2946 aa7.51□□□□□ -1.21
SMC6-207ENST00000448223 ARMS2P0C7Q2 107 aa7.51□□□□□ -1.21
SMC6-207ENST00000448223 CFC1BP0CG36 223 aa7.51□□□□□ -1.21
SMC6-207ENST00000448223 CFC1P0CG37 223 aa7.51□□□□□ -1.21
SMC6-207ENST00000448223 KLF5Q13887 457 aaPredicted RBP7.51□□□□□ -1.21
SMC6-207ENST00000448223 C17orf82Q86X59 251 aaPredicted RBP7.51□□□□□ -1.21
SMC6-207ENST00000448223 DPH3P1Q9H4G8 78 aa7.51□□□□□ -1.21
SMC6-207ENST00000448223 RPUSD1Q9UJJ7 312 aaKnown RBP7.51□□□□□ -1.21
SMC6-207ENST00000448223 CHD3Q12873 2000 aaKnown RBP7.51□□□□□ -1.21
SMC6-207ENST00000448223 ADARB2-AS1A8MUL3 147 aa7.5□□□□□ -1.21
SMC6-207ENST00000448223 HLA-DRB4P13762 266 aa7.5□□□□□ -1.21
SMC6-207ENST00000448223 ZNF876PQ49A33 203 aa7.5□□□□□ -1.21
SMC6-207ENST00000448223 HLA-DRB4X5D2U9 266 aa7.5□□□□□ -1.21
SMC6-207ENST00000448223 IGHV3OR16-8A0A075B7F1 116 aa7.5□□□□□ -1.21
SMC6-207ENST00000448223 TINCRA0A1B0GVN0 87 aa7.5□□□□□ -1.21
SMC6-207ENST00000448223 C9orf172C9J069 976 aa7.5□□□□□ -1.21
SMC6-207ENST00000448223 PRCDQ00LT1 54 aa7.5□□□□□ -1.21
SMC6-207ENST00000448223 DEFB109BQ30KR1 87 aa7.5□□□□□ -1.21
SMC6-207ENST00000448223 C20orf204Q6ZNR8 217 aa7.5□□□□□ -1.21
SMC6-207ENST00000448223 SPANXB1Q9NS25 103 aaPredicted RBP7.5□□□□□ -1.21
SMC6-207ENST00000448223 INS-IGF2F8WCM5 200 aa7.5□□□□□ -1.21
SMC6-207ENST00000448223 INSP01308 110 aa7.5□□□□□ -1.21
SMC6-207ENST00000448223 CELA3BP08861 270 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms