RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 OR10J6PQ8NGY7 276 aa17.99■□□□□ 0.47
UFD1-204ENST00000447868 CELA1Q9UNI1 258 aa17.99■□□□□ 0.47
UFD1-204ENST00000447868 LYSTQ99698 3801 aa17.99■□□□□ 0.47
UFD1-204ENST00000447868 PLECQ15149 4684 aaKnown RBP17.98■□□□□ 0.47
UFD1-204ENST00000447868 CRXO43186 299 aaPredicted RBP17.98■□□□□ 0.47
UFD1-204ENST00000447868 NDUFB4O95168 129 aa17.98■□□□□ 0.47
UFD1-204ENST00000447868 AQP10Q96PS8 301 aa17.98■□□□□ 0.47
UFD1-204ENST00000447868 OR51M1Q9H341 326 aa17.98■□□□□ 0.47
UFD1-204ENST00000447868 HBE1P02100 147 aa17.97■□□□□ 0.47
UFD1-204ENST00000447868 PAXXQ9BUH6 204 aa17.97■□□□□ 0.47
UFD1-204ENST00000447868 FXYD6-FXYD2A0A087WZ82 144 aa17.96■□□□□ 0.47
UFD1-204ENST00000447868 OR10J4P0C629 311 aa17.96■□□□□ 0.47
UFD1-204ENST00000447868 PDE6HQ13956 83 aa17.96■□□□□ 0.47
UFD1-204ENST00000447868 ZNF767PQ75MW2 155 aa17.96■□□□□ 0.47
UFD1-204ENST00000447868 EXOC3-AS1Q8N2X6 119 aa17.96■□□□□ 0.47
UFD1-204ENST00000447868 OR2T35Q8NGX2 323 aa17.96■□□□□ 0.47
UFD1-204ENST00000447868 M0R3E3 92 aa17.95■□□□□ 0.46
UFD1-204ENST00000447868 OR7C2O60412 319 aa17.95■□□□□ 0.46
UFD1-204ENST00000447868 TMEM189A5PLL7 270 aa17.94■□□□□ 0.46
UFD1-204ENST00000447868 EIF3GO75821 320 aaKnown RBP eCLIP17.94■□□□□ 0.46
UFD1-204ENST00000447868 NBEAP1P0C6P0 100 aa17.94■□□□□ 0.46
UFD1-204ENST00000447868 ZNF266Q14584 549 aa17.94■□□□□ 0.46
UFD1-204ENST00000447868 RRN3P1Q2M238 152 aa17.94■□□□□ 0.46
UFD1-204ENST00000447868 Q6ZTC4 211 aa17.94■□□□□ 0.46
UFD1-204ENST00000447868 INO80EQ8NBZ0 244 aaPredicted RBP17.94■□□□□ 0.46
UFD1-204ENST00000447868 RNF141Q8WVD5 230 aa17.94■□□□□ 0.46
UFD1-204ENST00000447868 FXYD5Q96DB9 178 aa17.94■□□□□ 0.46
UFD1-204ENST00000447868 MRPL53Q96EL3 112 aaKnown RBP17.94■□□□□ 0.46
UFD1-204ENST00000447868 AAMDCQ9H7C9 122 aa17.94■□□□□ 0.46
UFD1-204ENST00000447868 RYR2Q92736 4967 aa17.93■□□□□ 0.46
UFD1-204ENST00000447868 LOC102723971A0A1B0GUV8 181 aa17.93■□□□□ 0.46
UFD1-204ENST00000447868 PRM2P04554 102 aa17.93■□□□□ 0.46
UFD1-204ENST00000447868 CDKN1BP46527 198 aa17.93■□□□□ 0.46
UFD1-204ENST00000447868 RPP25LQ8N5L8 163 aaKnown RBP17.93■□□□□ 0.46
UFD1-204ENST00000447868 HSD17B11Q8NBQ5 300 aa17.93■□□□□ 0.46
UFD1-204ENST00000447868 ZNF705GA8MUZ8 300 aaPredicted RBP17.92■□□□□ 0.46
UFD1-204ENST00000447868 RAB2AP61019 212 aa17.92■□□□□ 0.46
UFD1-204ENST00000447868 ICAM4Q14773 271 aa17.92■□□□□ 0.46
UFD1-204ENST00000447868 C12orf74Q32Q52 190 aa17.92■□□□□ 0.46
UFD1-204ENST00000447868 ACOT6Q3I5F7 207 aaPredicted RBP17.92■□□□□ 0.46
UFD1-204ENST00000447868 ZNF503Q96F45 646 aa17.92■□□□□ 0.46
UFD1-204ENST00000447868 PRELID1Q9Y255 219 aa17.92■□□□□ 0.46
UFD1-204ENST00000447868 NPIPB6E9PJ23 425 aa17.91■□□□□ 0.46
UFD1-204ENST00000447868 M6PRP20645 277 aa17.91■□□□□ 0.46
UFD1-204ENST00000447868 TAS2R45P59539 299 aa17.91■□□□□ 0.46
UFD1-204ENST00000447868 UBE2L3P68036 154 aaKnown RBP17.91■□□□□ 0.46
UFD1-204ENST00000447868 KHDC3LQ587J8 217 aa17.91■□□□□ 0.46
UFD1-204ENST00000447868 FAM122CQ6P4D5 195 aa17.91■□□□□ 0.46
UFD1-204ENST00000447868 C2CD4CQ8TF44 421 aa17.91■□□□□ 0.46
UFD1-204ENST00000447868 LINC01587Q99440 93 aa17.91■□□□□ 0.46
UFD1-204ENST00000447868 TNFSF18Q9UNG2 199 aa17.91■□□□□ 0.46
UFD1-204ENST00000447868 RNF222A6NCQ9 220 aa17.9■□□□□ 0.46
UFD1-204ENST00000447868 C11orf94C9JXX5 98 aa17.9■□□□□ 0.46
UFD1-204ENST00000447868 J3KRW8 73 aa17.9■□□□□ 0.46
UFD1-204ENST00000447868 SPART-AS1P0CW21 52 aa17.9■□□□□ 0.46
UFD1-204ENST00000447868 CT45A10P0DMU9 189 aa17.9■□□□□ 0.46
UFD1-204ENST00000447868 ERCC8Q13216 396 aa17.9■□□□□ 0.46
UFD1-204ENST00000447868 KIR3DS1Q14943 382 aa17.9■□□□□ 0.46
UFD1-204ENST00000447868 PHYHIPLQ96FC7 376 aa17.9■□□□□ 0.46
UFD1-204ENST00000447868 ALMS1Q8TCU4 4167 aa17.9■□□□□ 0.46
UFD1-204ENST00000447868 A0A1W2PPV4 95 aa17.89■□□□□ 0.45
UFD1-204ENST00000447868 TSPOP30536 169 aa17.89■□□□□ 0.45
UFD1-204ENST00000447868 YTHDF2Q9Y5A9 579 aaKnown RBP17.89■□□□□ 0.45
UFD1-204ENST00000447868 TRAV10A0A0B4J240 114 aa17.88■□□□□ 0.45
UFD1-204ENST00000447868 G3V3Q6 166 aa17.88■□□□□ 0.45
UFD1-204ENST00000447868 HTN1P15515 57 aa17.88■□□□□ 0.45
UFD1-204ENST00000447868 ATP6V0CP27449 155 aa17.88■□□□□ 0.45
UFD1-204ENST00000447868 FAM222AQ5U5X8 452 aa17.88■□□□□ 0.45
UFD1-204ENST00000447868 OR10G4Q8NGN3 311 aa17.88■□□□□ 0.45
UFD1-204ENST00000447868 OR10G9Q8NGN4 311 aa17.88■□□□□ 0.45
UFD1-204ENST00000447868 OR10G7Q8NGN6 311 aa17.88■□□□□ 0.45
UFD1-204ENST00000447868 DKK2Q9UBU2 259 aa17.88■□□□□ 0.45
UFD1-204ENST00000447868 IGLL5B9A064 214 aa17.87■□□□□ 0.45
UFD1-204ENST00000447868 LEPP41159 167 aa17.87■□□□□ 0.45
UFD1-204ENST00000447868 RANP62826 216 aaKnown RBP17.87■□□□□ 0.45
UFD1-204ENST00000447868 TMEM256Q8N2U0 113 aa17.87■□□□□ 0.45
UFD1-204ENST00000447868 LINC00476Q8WZB0 136 aa17.87■□□□□ 0.45
UFD1-204ENST00000447868 IGKV2-40A0A087WW87 121 aaPredicted RBP17.86■□□□□ 0.45
UFD1-204ENST00000447868 SMLR1H3BR10 107 aa17.86■□□□□ 0.45
UFD1-204ENST00000447868 LY6G6CO95867 125 aa17.86■□□□□ 0.45
UFD1-204ENST00000447868 IGKV2D-40P01614 121 aaPredicted RBP17.86■□□□□ 0.45
UFD1-204ENST00000447868 AZU1P20160 251 aa17.86■□□□□ 0.45
UFD1-204ENST00000447868 GFI1BQ5VTD9 330 aa17.86■□□□□ 0.45
UFD1-204ENST00000447868 RPL7L1Q6DKI1 246 aaKnown RBP17.86■□□□□ 0.45
UFD1-204ENST00000447868 OR2G3Q8NGZ4 309 aa17.86■□□□□ 0.45
UFD1-204ENST00000447868 ODF3Q96PU9 254 aa17.86■□□□□ 0.45
UFD1-204ENST00000447868 PSMG3Q9BT73 122 aaPredicted RBP17.86■□□□□ 0.45
UFD1-204ENST00000447868 SH3BGRL3Q9H299 93 aa17.86■□□□□ 0.45
UFD1-204ENST00000447868 PLA2G2EQ9NZK7 142 aa17.86■□□□□ 0.45
UFD1-204ENST00000447868 HMGB3O15347 200 aaKnown RBP17.85■□□□□ 0.45
UFD1-204ENST00000447868 AGPAT4-IT1Q9H0P7 198 aa17.85■□□□□ 0.45
UFD1-204ENST00000447868 Q9H3A6 140 aa17.85■□□□□ 0.45
UFD1-204ENST00000447868 DNAH1Q9P2D7 4330 aa17.85■□□□□ 0.45
UFD1-204ENST00000447868 DEFB131BA0A096LNP1 70 aa17.84■□□□□ 0.45
UFD1-204ENST00000447868 BORCS7-ASMTA0A0B4J1R7 106 aa17.84■□□□□ 0.45
UFD1-204ENST00000447868 TEX48A0A1B0GUV7 120 aa17.84■□□□□ 0.45
UFD1-204ENST00000447868 ARPC5O15511 151 aa17.84■□□□□ 0.45
UFD1-204ENST00000447868 TAS2R60P59551 318 aa17.84■□□□□ 0.45
UFD1-204ENST00000447868 NIPSNAP3BQ9BS92 247 aa17.84■□□□□ 0.45
UFD1-204ENST00000447868 LINC00477Q96M19 166 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms