RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 FUT9Q9Y231 359 aa9.71□□□□□ -0.86
HMGN1-208ENST00000443046 STRAPQ9Y3F4 350 aaKnown RBP9.71□□□□□ -0.86
HMGN1-208ENST00000443046 LRCOL1A6NCL2 159 aa9.7□□□□□ -0.86
HMGN1-208ENST00000443046 NPIPB6E9PJ23 425 aa9.7□□□□□ -0.86
HMGN1-208ENST00000443046 H3BP45 60 aa9.7□□□□□ -0.86
HMGN1-208ENST00000443046 RGS5O15539 181 aa9.7□□□□□ -0.86
HMGN1-208ENST00000443046 PAX4O43316 350 aa9.7□□□□□ -0.86
HMGN1-208ENST00000443046 ANXA7P20073 488 aaKnown RBP9.7□□□□□ -0.86
HMGN1-208ENST00000443046 ANXA2RQ3ZCQ2 193 aa9.7□□□□□ -0.86
HMGN1-208ENST00000443046 ZNF680Q8NEM1 530 aa9.7□□□□□ -0.86
HMGN1-208ENST00000443046 SAT2Q96F10 170 aaPredicted RBP9.7□□□□□ -0.86
HMGN1-208ENST00000443046 ST6GAL2Q96JF0 529 aa9.7□□□□□ -0.86
HMGN1-208ENST00000443046 ARV1Q9H2C2 271 aa9.7□□□□□ -0.86
HMGN1-208ENST00000443046 RABL2AQ9UBK7 228 aaPredicted RBP9.7□□□□□ -0.86
HMGN1-208ENST00000443046 RABL2BQ9UNT1 228 aa9.7□□□□□ -0.86
HMGN1-208ENST00000443046 LY96Q9Y6Y9 160 aa9.7□□□□□ -0.86
HMGN1-208ENST00000443046 TRGV1A0A0A0MS02 117 aa9.69□□□□□ -0.86
HMGN1-208ENST00000443046 SMCO3A2RU48 225 aa9.69□□□□□ -0.86
HMGN1-208ENST00000443046 SNRPCP09234 159 aaKnown RBP9.69□□□□□ -0.86
HMGN1-208ENST00000443046 IGLC2P0DOY2 106 aa9.69□□□□□ -0.86
HMGN1-208ENST00000443046 LEPP41159 167 aa9.69□□□□□ -0.86
HMGN1-208ENST00000443046 CRYBA4P53673 196 aa9.69□□□□□ -0.86
HMGN1-208ENST00000443046 ID3Q02535 119 aa9.69□□□□□ -0.86
HMGN1-208ENST00000443046 IL18Q14116 193 aa9.69□□□□□ -0.86
HMGN1-208ENST00000443046 PXDC1Q5TGL8 231 aa9.69□□□□□ -0.86
HMGN1-208ENST00000443046 MCUBQ9NWR8 336 aa9.69□□□□□ -0.86
HMGN1-208ENST00000443046 FAM30AQ9NZY2 134 aa9.69□□□□□ -0.86
HMGN1-208ENST00000443046 PRO0255Q9UI72 69 aa9.69□□□□□ -0.86
HMGN1-208ENST00000443046 FNDC10F2Z333 226 aa9.68□□□□□ -0.86
HMGN1-208ENST00000443046 J3KRW8 73 aa9.68□□□□□ -0.86
HMGN1-208ENST00000443046 TCL1AP56279 114 aa9.68□□□□□ -0.86
HMGN1-208ENST00000443046 FHL2Q14192 279 aa9.68□□□□□ -0.86
HMGN1-208ENST00000443046 MRPL23Q16540 153 aaKnown RBP9.68□□□□□ -0.86
HMGN1-208ENST00000443046 SERTAD4-AS1Q5TG53 156 aa9.68□□□□□ -0.86
HMGN1-208ENST00000443046 LINC00305Q7Z4B0 112 aa9.68□□□□□ -0.86
HMGN1-208ENST00000443046 NTN5Q8WTR8 489 aaPredicted RBP9.68□□□□□ -0.86
HMGN1-208ENST00000443046 NPVFQ9HCQ7 196 aa9.68□□□□□ -0.86
HMGN1-208ENST00000443046 KLF12Q9Y4X4 402 aa9.68□□□□□ -0.86
HMGN1-208ENST00000443046 PXMP4Q9Y6I8 212 aa9.68□□□□□ -0.86
HMGN1-208ENST00000443046 IGLV5-52A0A0A0MRZ9 124 aa9.67□□□□□ -0.86
HMGN1-208ENST00000443046 KLLNB2CW77 178 aa9.67□□□□□ -0.86
HMGN1-208ENST00000443046 H3BQ15 152 aa9.67□□□□□ -0.86
HMGN1-208ENST00000443046 H3BTX0 84 aa9.67□□□□□ -0.86
HMGN1-208ENST00000443046 SLC25A5P05141 298 aaKnown RBP9.67□□□□□ -0.86
HMGN1-208ENST00000443046 SLAQ13239 276 aa9.67□□□□□ -0.86
HMGN1-208ENST00000443046 NEGR1Q7Z3B1 354 aa9.67□□□□□ -0.86
HMGN1-208ENST00000443046 BPIFA4PQ86YQ2 179 aa9.67□□□□□ -0.86
HMGN1-208ENST00000443046 WFDC10BQ8IUB3 73 aa9.67□□□□□ -0.86
HMGN1-208ENST00000443046 TMEM37Q8WXS4 190 aa9.67□□□□□ -0.86
HMGN1-208ENST00000443046 DIRAS2Q96HU8 199 aa9.67□□□□□ -0.86
HMGN1-208ENST00000443046 FAM19A4Q96LR4 140 aa9.67□□□□□ -0.86
HMGN1-208ENST00000443046 HHLA3Q9XRX5 114 aa9.67□□□□□ -0.86
HMGN1-208ENST00000443046 PKHD1L1Q86WI1 4243 aa9.66□□□□□ -0.86
HMGN1-208ENST00000443046 C7orf71A4D174 169 aa9.66□□□□□ -0.86
HMGN1-208ENST00000443046 PRAF2O60831 178 aa9.66□□□□□ -0.86
HMGN1-208ENST00000443046 CCNKO75909 580 aa9.66□□□□□ -0.86
HMGN1-208ENST00000443046 SFT2D2O95562 160 aa9.66□□□□□ -0.86
HMGN1-208ENST00000443046 C1QBP02746 253 aa9.66□□□□□ -0.86
HMGN1-208ENST00000443046 POLR2GP62487 172 aaKnown RBP eCLIP9.66□□□□□ -0.86
HMGN1-208ENST00000443046 MORN5Q5VZ52 161 aa9.66□□□□□ -0.86
HMGN1-208ENST00000443046 TMEM14EPQ6UXP3 125 aa9.66□□□□□ -0.86
HMGN1-208ENST00000443046 EIF4E3Q8N5X7 224 aaKnown RBP9.66□□□□□ -0.86
HMGN1-208ENST00000443046 VGLL1Q99990 258 aa9.66□□□□□ -0.86
HMGN1-208ENST00000443046 SOSTQ9BQB4 213 aa9.66□□□□□ -0.86
HMGN1-208ENST00000443046 HOXB5P09067 269 aa9.65□□□□□ -0.86
HMGN1-208ENST00000443046 EVI2AP22794 236 aa9.65□□□□□ -0.86
HMGN1-208ENST00000443046 CD300CQ08708 224 aa9.65□□□□□ -0.86
HMGN1-208ENST00000443046 SLC38A11Q08AI6 406 aa9.65□□□□□ -0.86
HMGN1-208ENST00000443046 OPCMLQ14982 345 aa9.65□□□□□ -0.86
HMGN1-208ENST00000443046 IBA57Q5T440 356 aaKnown RBP9.65□□□□□ -0.86
HMGN1-208ENST00000443046 SMIM8Q96KF7 97 aa9.65□□□□□ -0.86
HMGN1-208ENST00000443046 C8orf49Q96NF6 230 aa9.65□□□□□ -0.86
HMGN1-208ENST00000443046 MRPL32Q9BYC8 188 aaKnown RBP9.65□□□□□ -0.86
HMGN1-208ENST00000443046 PSENENQ9NZ42 101 aa9.65□□□□□ -0.86
HMGN1-208ENST00000443046 K7EQD1 137 aa9.64□□□□□ -0.87
HMGN1-208ENST00000443046 IGHV3-53P01767 116 aa9.64□□□□□ -0.87
HMGN1-208ENST00000443046 PLA2G1BP04054 148 aaKnown RBP9.64□□□□□ -0.87
HMGN1-208ENST00000443046 VAMP1P23763 118 aa9.64□□□□□ -0.87
HMGN1-208ENST00000443046 RRAS2P62070 204 aaPredicted RBP9.64□□□□□ -0.87
HMGN1-208ENST00000443046 PPP1R1AQ13522 171 aa9.64□□□□□ -0.87
HMGN1-208ENST00000443046 IQCF2Q8IXL9 164 aa9.64□□□□□ -0.87
HMGN1-208ENST00000443046 DEFB104AQ8WTQ1 72 aa9.64□□□□□ -0.87
HMGN1-208ENST00000443046 RSL24D1Q9UHA3 163 aaKnown RBP9.64□□□□□ -0.87
HMGN1-208ENST00000443046 AGPAT2O15120 278 aa9.63□□□□□ -0.87
HMGN1-208ENST00000443046 BTN1A1Q13410 526 aa9.63□□□□□ -0.87
HMGN1-208ENST00000443046 SPCS2Q15005 226 aa9.63□□□□□ -0.87
HMGN1-208ENST00000443046 GUK1Q16774 197 aa9.63□□□□□ -0.87
HMGN1-208ENST00000443046 Q6ZSA8 131 aa9.63□□□□□ -0.87
HMGN1-208ENST00000443046 ZNF546Q86UE3 836 aa9.63□□□□□ -0.87
HMGN1-208ENST00000443046 C10orf126Q8N4M7 172 aa9.63□□□□□ -0.87
HMGN1-208ENST00000443046 Q8N814 137 aa9.63□□□□□ -0.87
HMGN1-208ENST00000443046 MRPL16Q9NX20 251 aaKnown RBP9.63□□□□□ -0.87
HMGN1-208ENST00000443046 TP53TG3Q9ULZ0 132 aa9.63□□□□□ -0.87
HMGN1-208ENST00000443046 GOSR2O14653 212 aa9.62□□□□□ -0.87
HMGN1-208ENST00000443046 ZNF253O75346 499 aa9.62□□□□□ -0.87
HMGN1-208ENST00000443046 MPDU1O75352 247 aa9.62□□□□□ -0.87
HMGN1-208ENST00000443046 CRYGDP07320 174 aa9.62□□□□□ -0.87
HMGN1-208ENST00000443046 METTL15P1P0C7V9 234 aa9.62□□□□□ -0.87
HMGN1-208ENST00000443046 CRISP2P16562 243 aa9.62□□□□□ -0.87
HMGN1-208ENST00000443046 ERCC8Q13216 396 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms