RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 WDR61Q9GZS3 305 aaKnown RBP15.06■□□□□ 0
CDKN3-204ENST00000442975 APLNQ9ULZ1 77 aa15.06■□□□□ 0
CDKN3-204ENST00000442975 ALG5Q9Y673 324 aa15.06■□□□□ 0
CDKN3-204ENST00000442975 VPS13DQ5THJ4 4388 aa15.06■□□□□ 0
CDKN3-204ENST00000442975 PTTG1O95997 202 aa15.05■□□□□ -0
CDKN3-204ENST00000442975 PRM2P04554 102 aa15.05■□□□□ -0
CDKN3-204ENST00000442975 PYYP10082 97 aa15.05■□□□□ -0
CDKN3-204ENST00000442975 SAT2Q96F10 170 aaPredicted RBP15.05■□□□□ -0
CDKN3-204ENST00000442975 NIPSNAP3BQ9BS92 247 aa15.05■□□□□ -0
CDKN3-204ENST00000442975 RNF126Q9BV68 326 aa15.05■□□□□ -0
CDKN3-204ENST00000442975 PARD6GQ9BYG4 376 aaPredicted RBP15.05■□□□□ -0
CDKN3-204ENST00000442975 SMIM3Q9BZL3 60 aa15.05■□□□□ -0
CDKN3-204ENST00000442975 HSPB11Q9Y547 144 aa15.05■□□□□ -0
CDKN3-204ENST00000442975 HTN3P15516 51 aa15.04■□□□□ -0
CDKN3-204ENST00000442975 CDKN1BP46527 198 aa15.04■□□□□ -0
CDKN3-204ENST00000442975 BLNKQ8WV28 456 aa15.04■□□□□ -0
CDKN3-204ENST00000442975 LINC01587Q99440 93 aa15.04■□□□□ -0
CDKN3-204ENST00000442975 TMEM14CQ9P0S9 112 aa15.04■□□□□ -0
CDKN3-204ENST00000442975 TIMM9Q9Y5J7 89 aa15.04■□□□□ -0
CDKN3-204ENST00000442975 KMT2AQ03164 3969 aa15.03■□□□□ -0
CDKN3-204ENST00000442975 TRBV19A0A075B6N1 114 aa15.03■□□□□ -0
CDKN3-204ENST00000442975 C17orf112F2Z3M2 114 aa15.03■□□□□ -0
CDKN3-204ENST00000442975 HTN1P15515 57 aa15.03■□□□□ -0
CDKN3-204ENST00000442975 RPL12P30050 165 aaKnown RBP15.03■□□□□ -0
CDKN3-204ENST00000442975 MIR17HGQ75NE6 70 aa15.03■□□□□ -0
CDKN3-204ENST00000442975 SLC25A2Q9BXI2 301 aa15.03■□□□□ -0
CDKN3-204ENST00000442975 PLA2G2EQ9NZK7 142 aa15.03■□□□□ -0
CDKN3-204ENST00000442975 ZNF253O75346 499 aa15.02■□□□□ -0
CDKN3-204ENST00000442975 HIST1H1EP10412 219 aaKnown RBP15.02■□□□□ -0
CDKN3-204ENST00000442975 J3KRW8 73 aa15.01□□□□□ -0.01
CDKN3-204ENST00000442975 M0R3E3 92 aa15.01□□□□□ -0.01
CDKN3-204ENST00000442975 IFNA5P01569 189 aa15.01□□□□□ -0.01
CDKN3-204ENST00000442975 TSPOP30536 169 aa15.01□□□□□ -0.01
CDKN3-204ENST00000442975 DAD1P61803 113 aa15.01□□□□□ -0.01
CDKN3-204ENST00000442975 TMEM256Q8N2U0 113 aa15.01□□□□□ -0.01
CDKN3-204ENST00000442975 NDUFAF3Q9BU61 184 aa15.01□□□□□ -0.01
CDKN3-204ENST00000442975 PDE6HQ13956 83 aa15□□□□□ -0.01
CDKN3-204ENST00000442975 KIR3DS1Q14943 382 aa15□□□□□ -0.01
CDKN3-204ENST00000442975 GFI1BQ5VTD9 330 aa15□□□□□ -0.01
CDKN3-204ENST00000442975 SCGB1C1Q8TD33 95 aa15□□□□□ -0.01
CDKN3-204ENST00000442975 MRPL32Q9BYC8 188 aaKnown RBP15□□□□□ -0.01
CDKN3-204ENST00000442975 NDUFB4O95168 129 aa14.99□□□□□ -0.01
CDKN3-204ENST00000442975 AZU1P20160 251 aa14.99□□□□□ -0.01
CDKN3-204ENST00000442975 TAS2R60P59551 318 aa14.99□□□□□ -0.01
CDKN3-204ENST00000442975 FFAR4Q5NUL3 377 aa14.99□□□□□ -0.01
CDKN3-204ENST00000442975 EXOC3-AS1Q8N2X6 119 aa14.99□□□□□ -0.01
CDKN3-204ENST00000442975 MRPL53Q96EL3 112 aaKnown RBP14.99□□□□□ -0.01
CDKN3-204ENST00000442975 FAM167A-AS1Q96KT0 104 aa14.99□□□□□ -0.01
CDKN3-204ENST00000442975 AAMDCQ9H7C9 122 aa14.99□□□□□ -0.01
CDKN3-204ENST00000442975 FUT9Q9Y231 359 aa14.99□□□□□ -0.01
CDKN3-204ENST00000442975 BIRC6Q9NR09 4857 aa14.99□□□□□ -0.01
CDKN3-204ENST00000442975 NPIPB6E9PJ23 425 aa14.98□□□□□ -0.01
CDKN3-204ENST00000442975 OR7C2O60412 319 aa14.98□□□□□ -0.01
CDKN3-204ENST00000442975 OR10J4P0C629 311 aa14.98□□□□□ -0.01
CDKN3-204ENST00000442975 CT45A10P0DMU9 189 aa14.98□□□□□ -0.01
CDKN3-204ENST00000442975 LEPP41159 167 aa14.98□□□□□ -0.01
CDKN3-204ENST00000442975 PAXXQ9BUH6 204 aa14.98□□□□□ -0.01
CDKN3-204ENST00000442975 MED28Q9H204 178 aa14.98□□□□□ -0.01
CDKN3-204ENST00000442975 LYRM9A8MSI8 78 aa14.97□□□□□ -0.01
CDKN3-204ENST00000442975 H7BYZ3 331 aa14.97□□□□□ -0.01
CDKN3-204ENST00000442975 DEFB130BP0DP73 79 aa14.97□□□□□ -0.01
CDKN3-204ENST00000442975 DEFB130AP0DP74 79 aa14.97□□□□□ -0.01
CDKN3-204ENST00000442975 FCN2Q15485 313 aa14.97□□□□□ -0.01
CDKN3-204ENST00000442975 FAM122CQ6P4D5 195 aa14.97□□□□□ -0.01
CDKN3-204ENST00000442975 OR51M1Q9H341 326 aa14.97□□□□□ -0.01
CDKN3-204ENST00000442975 PRELID1Q9Y255 219 aa14.97□□□□□ -0.01
CDKN3-204ENST00000442975 UBE2L3P68036 154 aaKnown RBP14.96□□□□□ -0.01
CDKN3-204ENST00000442975 ERCC8Q13216 396 aa14.96□□□□□ -0.01
CDKN3-204ENST00000442975 ICAM4Q14773 271 aa14.96□□□□□ -0.01
CDKN3-204ENST00000442975 OXA1LQ15070 435 aa14.96□□□□□ -0.01
CDKN3-204ENST00000442975 C16orf74Q96GX8 76 aa14.96□□□□□ -0.01
CDKN3-204ENST00000442975 PLAC8L1A1L4L8 177 aa14.95□□□□□ -0.02
CDKN3-204ENST00000442975 NBEAP1P0C6P0 100 aa14.95□□□□□ -0.02
CDKN3-204ENST00000442975 RNF141Q8WVD5 230 aa14.95□□□□□ -0.02
CDKN3-204ENST00000442975 FXYD5Q96DB9 178 aa14.95□□□□□ -0.02
CDKN3-204ENST00000442975 ODF3Q96PU9 254 aa14.95□□□□□ -0.02
CDKN3-204ENST00000442975 WFDC1Q9HC57 220 aa14.95□□□□□ -0.02
CDKN3-204ENST00000442975 DNAH10Q8IVF4 4471 aa14.94□□□□□ -0.02
CDKN3-204ENST00000442975 IGKV2-40A0A087WW87 121 aaPredicted RBP14.94□□□□□ -0.02
CDKN3-204ENST00000442975 TRAV12-3A0A0B4J271 114 aa14.94□□□□□ -0.02
CDKN3-204ENST00000442975 IGKV2D-40P01614 121 aaPredicted RBP14.94□□□□□ -0.02
CDKN3-204ENST00000442975 PHYHIPLQ96FC7 376 aa14.94□□□□□ -0.02
CDKN3-204ENST00000442975 C20orf144Q9BQM9 153 aa14.94□□□□□ -0.02
CDKN3-204ENST00000442975 DNAH6Q9C0G6 4158 aa14.94□□□□□ -0.02
CDKN3-204ENST00000442975 EIF3GO75821 320 aaKnown RBP eCLIP14.93□□□□□ -0.02
CDKN3-204ENST00000442975 KHDC3LQ587J8 217 aa14.93□□□□□ -0.02
CDKN3-204ENST00000442975 TMEM88Q6PEY1 159 aa14.93□□□□□ -0.02
CDKN3-204ENST00000442975 TMEM263Q8WUH6 116 aaKnown RBP14.93□□□□□ -0.02
CDKN3-204ENST00000442975 P0DMU3 169 aa14.92□□□□□ -0.02
CDKN3-204ENST00000442975 FAM231AP0DMU4 169 aa14.92□□□□□ -0.02
CDKN3-204ENST00000442975 FAM231CP0DMU5 169 aa14.92□□□□□ -0.02
CDKN3-204ENST00000442975 TAS2R45P59539 299 aa14.92□□□□□ -0.02
CDKN3-204ENST00000442975 CCDC28AQ8IWP9 274 aa14.92□□□□□ -0.02
CDKN3-204ENST00000442975 RNASE8Q8TDE3 154 aaKnown RBP14.92□□□□□ -0.02
CDKN3-204ENST00000442975 FAM210BQ96KR6 192 aa14.92□□□□□ -0.02
CDKN3-204ENST00000442975 NOP10Q9NPE3 64 aaKnown RBP14.92□□□□□ -0.02
CDKN3-204ENST00000442975 TMEM78Q5T7P6 136 aa14.91□□□□□ -0.02
CDKN3-204ENST00000442975 ZNF493Q6ZR52 646 aa14.91□□□□□ -0.02
CDKN3-204ENST00000442975 AGPAT4-IT1Q9H0P7 198 aa14.91□□□□□ -0.02
CDKN3-204ENST00000442975 TIMM8BQ9Y5J9 83 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms