RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 DAZAP1Q96EP5 407 aaKnown RBP7.12□□□□□ -1.27
HDAC6-209ENST00000440653 SLC50A1Q9BRV3 221 aa7.12□□□□□ -1.27
HDAC6-209ENST00000440653 NIT2Q9NQR4 276 aa7.12□□□□□ -1.27
HDAC6-209ENST00000440653 ZNF331Q9NQX6 463 aaPredicted RBP7.12□□□□□ -1.27
HDAC6-209ENST00000440653 RPH3ALQ9UNE2 315 aa7.12□□□□□ -1.27
HDAC6-209ENST00000440653 WNK2Q9Y3S1 2297 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 IGHV4-30-2A0A087WSY4 118 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 C19orf71A6NCJ1 209 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 AMBPP02760 352 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 CT45A10P0DMU9 189 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 CRISP2P16562 243 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 IER3P46695 156 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 Q0VG73 95 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 C19orf54Q5BKX5 351 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 KLF17Q5JT82 389 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-209ENST00000440653 FAM120AOSQ5T036 256 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 C1orf194Q5T5A4 169 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 LEMD1Q68G75 181 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 PRR27Q6MZM9 219 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 ZNF414Q96IQ9 312 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 TMEM160Q9NX00 188 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 CLEC5AQ9NY25 188 aa7.11□□□□□ -1.27
HDAC6-209ENST00000440653 TRAV41A0A0B4J266 112 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 TRAV34A0A0B4J273 112 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 A0A1B0GW15 77 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 OR2T8A6NH00 312 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 IGF1P05019 195 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 CTSGP08311 255 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 GPR183P32249 361 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 TPPP2P59282 170 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 PAFAH1B2P68402 229 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 HBBP68871 147 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 PSG3Q16557 428 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 PDZD11Q5EBL8 140 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 PYY3Q5JQD4 70 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 FAM162BQ5T6X4 162 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 GFI1BQ5VTD9 330 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 DMRTA1Q5VZB9 504 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 TMEM136Q6ZRR5 245 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 GOLT1AQ6ZVE7 132 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 NHLRC2Q8NBF2 726 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 NUDT10Q8NFP7 164 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 MRPL53Q96EL3 112 aaKnown RBP7.1□□□□□ -1.27
HDAC6-209ENST00000440653 NUDT11Q96G61 164 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 PRSS22Q9GZN4 317 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 ZFAND3Q9H8U3 227 aa7.1□□□□□ -1.27
HDAC6-209ENST00000440653 A0A1B0GXF2 115 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 HIGD1CA8MV81 97 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 DIRC3C9JPN6 131 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 TCL1AP56279 114 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 JOSD1Q15040 202 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-209ENST00000440653 IQCJQ1A5X6 159 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 SAPCD1Q5SSQ6 148 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 CYB5R2Q6BCY4 276 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 C16orf54Q6UWD8 224 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 RBPMS2Q6ZRY4 209 aaKnown RBP7.09□□□□□ -1.27
HDAC6-209ENST00000440653 COX8CQ7Z4L0 72 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 LINC01356Q8N9X3 169 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 USMG5Q96IX5 58 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 KCNS1Q96KK3 526 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 LINC00479Q96M42 142 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 CCDC140Q96MF4 163 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 METTL26Q96S19 204 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 NEU1Q99519 415 aa7.09□□□□□ -1.27
HDAC6-209ENST00000440653 RBAKDNA6NC62 111 aa7.08□□□□□ -1.28
HDAC6-209ENST00000440653 A6NDX4 124 aa7.08□□□□□ -1.28
HDAC6-209ENST00000440653 PCP4L1A6NKN8 68 aa7.08□□□□□ -1.28
HDAC6-209ENST00000440653 TCF21O43680 179 aa7.08□□□□□ -1.28
HDAC6-209ENST00000440653 IGLV2-11P01706 119 aa7.08□□□□□ -1.28
HDAC6-209ENST00000440653 IGHG2P01859 326 aa7.08□□□□□ -1.28
HDAC6-209ENST00000440653 APCSP02743 223 aa7.08□□□□□ -1.28
HDAC6-209ENST00000440653 RAB4BP61018 213 aa7.08□□□□□ -1.28
HDAC6-209ENST00000440653 ATP5G2Q06055 141 aa7.08□□□□□ -1.28
HDAC6-209ENST00000440653 MRPL54Q6P161 138 aaKnown RBP7.08□□□□□ -1.28
HDAC6-209ENST00000440653 EXOC3-AS1Q8N2X6 119 aa7.08□□□□□ -1.28
HDAC6-209ENST00000440653 NUP35Q8NFH5 326 aa7.08□□□□□ -1.28
HDAC6-209ENST00000440653 NDFIP1Q9BT67 221 aa7.08□□□□□ -1.28
HDAC6-209ENST00000440653 PSG8Q9UQ74 426 aa7.08□□□□□ -1.28
HDAC6-209ENST00000440653 A0A096LNT2 108 aa7.07□□□□□ -1.28
HDAC6-209ENST00000440653 TSTD3H0UI37 97 aa7.07□□□□□ -1.28
HDAC6-209ENST00000440653 H3BTX0 84 aa7.07□□□□□ -1.28
HDAC6-209ENST00000440653 H3BUX3 64 aa7.07□□□□□ -1.28
HDAC6-209ENST00000440653 IGHV4-38-2P0DP08 117 aa7.07□□□□□ -1.28
HDAC6-209ENST00000440653 RPS20P60866 119 aaKnown RBP7.07□□□□□ -1.28
HDAC6-209ENST00000440653 TOMM20LQ6UXN7 152 aa7.07□□□□□ -1.28
HDAC6-209ENST00000440653 PRNTQ86SH4 94 aa7.07□□□□□ -1.28
HDAC6-209ENST00000440653 BAGE3Q86Y29 109 aa7.07□□□□□ -1.28
HDAC6-209ENST00000440653 BORCS7Q96B45 105 aa7.07□□□□□ -1.28
HDAC6-209ENST00000440653 GNB4Q9HAV0 340 aa7.07□□□□□ -1.28
HDAC6-209ENST00000440653 HIF1ANQ9NWT6 349 aa7.07□□□□□ -1.28
HDAC6-209ENST00000440653 S4R3C0 116 aa7.07□□□□□ -1.28
HDAC6-209ENST00000440653 A0A0G2JLM5 398 aa7.06□□□□□ -1.28
HDAC6-209ENST00000440653 TMEM89A2RUT3 159 aa7.06□□□□□ -1.28
HDAC6-209ENST00000440653 NDUFA4O00483 81 aa7.06□□□□□ -1.28
HDAC6-209ENST00000440653 CA1P00915 261 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-209ENST00000440653 TRGV3P03979 118 aa7.06□□□□□ -1.28
HDAC6-209ENST00000440653 LOXL1Q08397 574 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-209ENST00000440653 SAMD13Q5VXD3 122 aa7.06□□□□□ -1.28
HDAC6-209ENST00000440653 BRD3OSQ6XYD6 125 aa7.06□□□□□ -1.28
HDAC6-209ENST00000440653 C9orf139Q6ZV77 190 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms