RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 SEC11BP0C7V7 166 aa13.38□□□□□ -0.27
PTX4-202ENST00000440447 STAG3L2P0CL84 134 aa13.38□□□□□ -0.27
PTX4-202ENST00000440447 STAG3L3P0CL85 134 aa13.38□□□□□ -0.27
PTX4-202ENST00000440447 TPT1P13693 172 aaKnown RBP13.38□□□□□ -0.27
PTX4-202ENST00000440447 CNN1P51911 297 aaKnown RBP13.38□□□□□ -0.27
PTX4-202ENST00000440447 BAP18Q8IXM2 172 aa13.38□□□□□ -0.27
PTX4-202ENST00000440447 RNF183Q96D59 192 aa13.38□□□□□ -0.27
PTX4-202ENST00000440447 MRPL53Q96EL3 112 aaKnown RBP13.38□□□□□ -0.27
PTX4-202ENST00000440447 C1QTNF4Q9BXJ3 329 aa13.38□□□□□ -0.27
PTX4-202ENST00000440447 ZNF705DP0CH99 300 aaPredicted RBP13.37□□□□□ -0.27
PTX4-202ENST00000440447 ZNF705BP0CI00 300 aaPredicted RBP13.37□□□□□ -0.27
PTX4-202ENST00000440447 ARL14EPLP0DKL9 152 aa13.37□□□□□ -0.27
PTX4-202ENST00000440447 C4BPBP20851 252 aa13.37□□□□□ -0.27
PTX4-202ENST00000440447 HIST1H1AQ02539 215 aaPredicted RBP13.37□□□□□ -0.27
PTX4-202ENST00000440447 ICAM4Q14773 271 aa13.37□□□□□ -0.27
PTX4-202ENST00000440447 LYPD1Q8N2G4 141 aa13.37□□□□□ -0.27
PTX4-202ENST00000440447 EXOC3-AS1Q8N2X6 119 aa13.37□□□□□ -0.27
PTX4-202ENST00000440447 OR10J6PQ8NGY7 276 aa13.37□□□□□ -0.27
PTX4-202ENST00000440447 PHYHIPLQ96FC7 376 aa13.37□□□□□ -0.27
PTX4-202ENST00000440447 CTXND1A0A1B0GTU2 59 aa13.36□□□□□ -0.27
PTX4-202ENST00000440447 PRAC2D3DTV9 90 aa13.36□□□□□ -0.27
PTX4-202ENST00000440447 GIG44P09565 113 aaPredicted RBP13.36□□□□□ -0.27
PTX4-202ENST00000440447 PRB4P10163 310 aaPredicted RBP13.36□□□□□ -0.27
PTX4-202ENST00000440447 RANP62826 216 aaKnown RBP13.36□□□□□ -0.27
PTX4-202ENST00000440447 STOML3Q8TAV4 291 aa13.36□□□□□ -0.27
PTX4-202ENST00000440447 A8MTW9 85 aa13.35□□□□□ -0.27
PTX4-202ENST00000440447 M0R3E3 92 aa13.35□□□□□ -0.27
PTX4-202ENST00000440447 CXorf1O96002 111 aa13.35□□□□□ -0.27
PTX4-202ENST00000440447 FXYD7P58549 80 aa13.35□□□□□ -0.27
PTX4-202ENST00000440447 PPP1R14DQ9NXH3 145 aa13.35□□□□□ -0.27
PTX4-202ENST00000440447 XCL2Q9UBD3 114 aa13.35□□□□□ -0.27
PTX4-202ENST00000440447 UMAD1C9J7I0 102 aa13.34□□□□□ -0.27
PTX4-202ENST00000440447 GCHFRP30047 84 aa13.34□□□□□ -0.27
PTX4-202ENST00000440447 ZNF726P1Q15940 193 aa13.34□□□□□ -0.27
PTX4-202ENST00000440447 SSX7Q7RTT5 188 aa13.34□□□□□ -0.27
PTX4-202ENST00000440447 SLC51BQ86UW2 128 aa13.34□□□□□ -0.27
PTX4-202ENST00000440447 C9orf62Q8N4C0 152 aa13.34□□□□□ -0.27
PTX4-202ENST00000440447 SLC35B3Q9H1N7 401 aa13.34□□□□□ -0.27
PTX4-202ENST00000440447 Q9H3A6 140 aa13.34□□□□□ -0.27
PTX4-202ENST00000440447 AGRNO00468 2067 aa13.34□□□□□ -0.27
PTX4-202ENST00000440447 COL7A1Q02388 2944 aa13.33□□□□□ -0.27
PTX4-202ENST00000440447 CSN1S1P47710 185 aa13.33□□□□□ -0.28
PTX4-202ENST00000440447 EIF5AL1Q6IS14 154 aaKnown RBP13.33□□□□□ -0.28
PTX4-202ENST00000440447 AMTNQ6UX39 209 aa13.33□□□□□ -0.28
PTX4-202ENST00000440447 IQCF2Q8IXL9 164 aa13.33□□□□□ -0.28
PTX4-202ENST00000440447 TMED6Q8WW62 240 aa13.33□□□□□ -0.28
PTX4-202ENST00000440447 RARRES2Q99969 163 aa13.33□□□□□ -0.28
PTX4-202ENST00000440447 TMEM167BQ9NRX6 74 aa13.33□□□□□ -0.28
PTX4-202ENST00000440447 AMBPP02760 352 aa13.32□□□□□ -0.28
PTX4-202ENST00000440447 FAM74A1Q5RGS3 127 aa13.32□□□□□ -0.28
PTX4-202ENST00000440447 OR11H2Q8NH07 326 aa13.32□□□□□ -0.28
PTX4-202ENST00000440447 OTORQ9NRC9 128 aa13.32□□□□□ -0.28
PTX4-202ENST00000440447 PLA2G2EQ9NZK7 142 aa13.32□□□□□ -0.28
PTX4-202ENST00000440447 NBEAL2Q6ZNJ1 2754 aa13.31□□□□□ -0.28
PTX4-202ENST00000440447 PGPA6NDG6 321 aa13.31□□□□□ -0.28
PTX4-202ENST00000440447 BOLA2-SMG1P6H3BVE0 249 aa13.31□□□□□ -0.28
PTX4-202ENST00000440447 CSNK1G2-AS1Q8NCQ2 148 aa13.31□□□□□ -0.28
PTX4-202ENST00000440447 SUN5Q8TC36 379 aa13.31□□□□□ -0.28
PTX4-202ENST00000440447 MAP1LC3B2A6NCE7 125 aa13.3□□□□□ -0.28
PTX4-202ENST00000440447 NPIPB6E9PJ23 425 aa13.3□□□□□ -0.28
PTX4-202ENST00000440447 FHITP49789 147 aa13.3□□□□□ -0.28
PTX4-202ENST00000440447 SPINK13Q1W4C9 94 aa13.3□□□□□ -0.28
PTX4-202ENST00000440447 DPPA3Q6W0C5 159 aa13.3□□□□□ -0.28
PTX4-202ENST00000440447 CMTM2Q8TAZ6 248 aa13.3□□□□□ -0.28
PTX4-202ENST00000440447 FAM213BQ8TBF2 198 aa13.3□□□□□ -0.28
PTX4-202ENST00000440447 RXFP4Q8TDU9 374 aa13.3□□□□□ -0.28
PTX4-202ENST00000440447 MAP1LC3BQ9GZQ8 125 aa13.3□□□□□ -0.28
PTX4-202ENST00000440447 M0R2Z0 102 aa13.29□□□□□ -0.28
PTX4-202ENST00000440447 NKX2-5P52952 324 aaPredicted RBP13.29□□□□□ -0.28
PTX4-202ENST00000440447 FGF8P55075 233 aaPredicted RBP13.29□□□□□ -0.28
PTX4-202ENST00000440447 IGF2BP2-AS1Q96M15 143 aa13.29□□□□□ -0.28
PTX4-202ENST00000440447 LINC00477Q96M19 166 aa13.29□□□□□ -0.28
PTX4-202ENST00000440447 WWC2-AS2Q96NR7 200 aa13.29□□□□□ -0.28
PTX4-202ENST00000440447 IGKV2-40A0A087WW87 121 aaPredicted RBP13.28□□□□□ -0.28
PTX4-202ENST00000440447 IGKV2D-40P01614 121 aaPredicted RBP13.28□□□□□ -0.28
PTX4-202ENST00000440447 TSPOP30536 169 aa13.28□□□□□ -0.28
PTX4-202ENST00000440447 RAB5CP51148 216 aa13.28□□□□□ -0.28
PTX4-202ENST00000440447 ERCC8Q13216 396 aa13.28□□□□□ -0.28
PTX4-202ENST00000440447 TMPRSS5Q9H3S3 457 aa13.28□□□□□ -0.28
PTX4-202ENST00000440447 GOLT1BQ9Y3E0 138 aa13.28□□□□□ -0.28
PTX4-202ENST00000440447 ZNF705EA8MWA4 302 aaPredicted RBP13.27□□□□□ -0.29
PTX4-202ENST00000440447 INSP01308 110 aa13.27□□□□□ -0.29
PTX4-202ENST00000440447 CT45A10P0DMU9 189 aa13.27□□□□□ -0.29
PTX4-202ENST00000440447 CDKN1BP46527 198 aa13.27□□□□□ -0.29
PTX4-202ENST00000440447 TMEM78Q5T7P6 136 aa13.27□□□□□ -0.29
PTX4-202ENST00000440447 C9orf47Q6ZRZ4 202 aa13.27□□□□□ -0.29
PTX4-202ENST00000440447 ARL6IP6Q8N6S5 226 aa13.27□□□□□ -0.29
PTX4-202ENST00000440447 SFT2D1Q8WV19 159 aa13.27□□□□□ -0.29
PTX4-202ENST00000440447 MBD3L1Q8WWY6 194 aa13.27□□□□□ -0.29
PTX4-202ENST00000440447 ODF3Q96PU9 254 aa13.27□□□□□ -0.29
PTX4-202ENST00000440447 AGPAT4-IT1Q9H0P7 198 aa13.27□□□□□ -0.29
PTX4-202ENST00000440447 EDA2RQ9HAV5 297 aa13.27□□□□□ -0.29
PTX4-202ENST00000440447 TENM3Q9P273 2699 aa13.26□□□□□ -0.29
PTX4-202ENST00000440447 TRAV12-2A0A075B6T6 113 aa13.26□□□□□ -0.29
PTX4-202ENST00000440447 IGHV3OR16-12A0A075B7B8 117 aa13.26□□□□□ -0.29
PTX4-202ENST00000440447 A0A1W2PRE2 83 aa13.26□□□□□ -0.29
PTX4-202ENST00000440447 RBAKDNA6NC62 111 aa13.26□□□□□ -0.29
PTX4-202ENST00000440447 DIRC3C9JPN6 131 aa13.26□□□□□ -0.29
PTX4-202ENST00000440447 CRXO43186 299 aaPredicted RBP13.26□□□□□ -0.29
PTX4-202ENST00000440447 SLC25A5P05141 298 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms