RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 IZUMO1RA6ND01 250 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 PGPA6NDG6 321 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 NCBP2LA6PVI3 153 aaKnown RBP2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 ZNF705GA8MUZ8 300 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 H3BTX0 84 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 PEX7O00628 323 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 GATCO43716 136 aaKnown RBP2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 NDUFA3O95167 84 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 MT-ND6P03923 174 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 SLC25A5P05141 298 aaKnown RBP2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 IGLC1P0CG04 106 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 RD3LP0DJH9 198 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 HIST1H1BP16401 226 aaKnown RBP2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 CBLN1P23435 193 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 BRS3P32247 399 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 EFNA4P52798 201 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 LYZP61626 148 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 UBE2G1P62253 170 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 RANP62826 216 aaKnown RBP2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 KLRD1Q13241 179 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 EBI3Q14213 229 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 JOSD1Q15040 202 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 TMEM183BQ1AE95 376 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 C5orf64Q2M2E5 130 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 LDLRAD2Q5SZI1 272 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 IBA57Q5T440 356 aaKnown RBP2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 ZNF562Q6V9R5 426 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 C19orf35Q6ZS72 473 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 Q71RC1 249 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 VMO1Q7Z5L0 202 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 S100A7AQ86SG5 101 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 BAGE2Q86Y30 109 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 OR8I2Q8N0Y5 310 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 TTC9CQ8N5M4 171 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 BLNKQ8WV28 456 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 SMIM12Q96EX1 92 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 PRAC1Q96KF2 57 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 RASL11BQ9BPW5 248 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 OVOL2Q9BRP0 275 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 GNB1LQ9BYB4 327 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 SLC25A39Q9BZJ4 359 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 RNASE7Q9H1E1 156 aaKnown RBP2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 LPAR2Q9HBW0 351 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 MRPL27Q9P0M9 148 aaKnown RBP2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 TMEM14CQ9P0S9 112 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 EPDR1Q9UM22 224 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 RNF24Q9Y225 148 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 TBL2Q9Y4P3 447 aaKnown RBP2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 KLF12Q9Y4X4 402 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 GTF3C1Q12789 2109 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 DSCAMO60469 2012 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 IGLV11-55A0A075B6I3 123 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 IGHV2-70DA0A0C4DH43 119 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 TRBV6-1A0A0K0K1D8 114 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 A0A1W2PPR1 153 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 WI2-2373I1.2A0A1W2PRP0 233 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 LINC00587B1AMM8 73 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 K7EIM0 57 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 GNG7O60262 68 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 IGKV1-17P01599 117 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 HLA-DQA1P01909 254 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 TCRAP04437 139 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 SNRPCP09234 159 aaKnown RBP2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 HIST1H1EP10412 219 aaKnown RBP2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 CRISP2P16562 243 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 CD24P25063 80 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 GPR183P32249 361 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 UBE2E1P51965 193 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 TCL1AP56279 114 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 RAB4BP61018 213 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 PKIAP61925 76 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 LMO4P61968 165 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 GNG5P63218 68 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 PAFAH1B2P68402 229 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 CTAG1AP78358 180 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 Q0VG73 95 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 Q56UQ5 140 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 KLF17Q5JT82 389 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 RASL11AQ6T310 242 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 TMEM136Q6ZRR5 245 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 BAGE3Q86Y29 109 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 BPIFA4PQ86YQ2 179 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 DYNAPQ8N1N2 210 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 Q8N6K4 173 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 ZNF491Q8N8L2 437 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 C5orf17Q8NAS9 161 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 CMTM2Q8TAZ6 248 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 ITLN2Q8WWU7 325 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 ARPC1AQ92747 370 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 FMC1Q96HJ9 113 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 GPR82Q96P67 336 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 RBM14Q96PK6 669 aaKnown RBP2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 TBX15Q96SF7 602 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 SHANK2-AS3Q9BTD1 123 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 FAM103A1Q9BTL3 118 aaKnown RBP2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 Q9H3A6 140 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 HEATR1Q9H583 2144 aaKnown RBP2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 ZNF331Q9NQX6 463 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 OTORQ9NRC9 128 aa2.61□□□□□ -1.99
HMGB3P11-201ENST00000440127 THYN1Q9P016 225 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms