RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 HIST2H2BEQ16778 126 aa11.15□□□□□ -0.62
LRCH3-206ENST00000438796 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.15□□□□□ -0.62
LRCH3-206ENST00000438796 LY6G6FQ5SQ64 297 aa11.15□□□□□ -0.62
LRCH3-206ENST00000438796 ZFAND6Q6FIF0 208 aa11.15□□□□□ -0.62
LRCH3-206ENST00000438796 HIST1H2BHQ93079 126 aa11.15□□□□□ -0.62
LRCH3-206ENST00000438796 HIST1H2BNQ99877 126 aa11.15□□□□□ -0.62
LRCH3-206ENST00000438796 HIST1H2BMQ99879 126 aa11.15□□□□□ -0.62
LRCH3-206ENST00000438796 A0A0G2JMZ2 1700 aa11.15□□□□□ -0.62
LRCH3-206ENST00000438796 LRRC37A2A6NM11 1700 aa11.15□□□□□ -0.62
LRCH3-206ENST00000438796 ID3Q02535 119 aa11.14□□□□□ -0.63
LRCH3-206ENST00000438796 TMEM242Q9NWH2 141 aa11.14□□□□□ -0.63
LRCH3-206ENST00000438796 TRAV12-1A0A0B4J245 112 aa11.14□□□□□ -0.63
LRCH3-206ENST00000438796 ZNRF2Q8NHG8 242 aa11.14□□□□□ -0.63
LRCH3-206ENST00000438796 ATP6V0BQ99437 205 aa11.14□□□□□ -0.63
LRCH3-206ENST00000438796 IGKV1-39P01597 117 aa11.14□□□□□ -0.63
LRCH3-206ENST00000438796 IGKV1D-39P04432 117 aa11.14□□□□□ -0.63
LRCH3-206ENST00000438796 VWC2Q2TAL6 325 aa11.14□□□□□ -0.63
LRCH3-206ENST00000438796 MST1LQ2TV78 715 aa11.14□□□□□ -0.63
LRCH3-206ENST00000438796 ANGP03950 147 aaKnown RBP11.14□□□□□ -0.63
LRCH3-206ENST00000438796 IGHV1-69DA0A0B4J2H0 117 aa11.14□□□□□ -0.63
LRCH3-206ENST00000438796 OOSP1A8MZH6 123 aa11.14□□□□□ -0.63
LRCH3-206ENST00000438796 IGHV1-69P01742 117 aa11.14□□□□□ -0.63
LRCH3-206ENST00000438796 TAL2Q16559 108 aa11.14□□□□□ -0.63
LRCH3-206ENST00000438796 TRPT1Q86TN4 253 aaKnown RBP11.14□□□□□ -0.63
LRCH3-206ENST00000438796 DNAJC30Q96LL9 226 aa11.14□□□□□ -0.63
LRCH3-206ENST00000438796 NEGR1Q7Z3B1 354 aa11.13□□□□□ -0.63
LRCH3-206ENST00000438796 SPTBN2O15020 2390 aa11.13□□□□□ -0.63
LRCH3-206ENST00000438796 GAGE2BQ13066 116 aa11.13□□□□□ -0.63
LRCH3-206ENST00000438796 Q6P435 159 aa11.13□□□□□ -0.63
LRCH3-206ENST00000438796 IGKV2D-24A0A075B6R9 120 aa11.13□□□□□ -0.63
LRCH3-206ENST00000438796 C9JAW5 83 aa11.13□□□□□ -0.63
LRCH3-206ENST00000438796 UBE2BP63146 152 aa11.13□□□□□ -0.63
LRCH3-206ENST00000438796 SEC11AP67812 179 aa11.13□□□□□ -0.63
LRCH3-206ENST00000438796 RPP25LQ8N5L8 163 aaKnown RBP11.13□□□□□ -0.63
LRCH3-206ENST00000438796 TP53TG1Q9Y2A0 90 aa11.13□□□□□ -0.63
LRCH3-206ENST00000438796 H3BMM0 161 aa11.13□□□□□ -0.63
LRCH3-206ENST00000438796 UBE2WQ96B02 151 aa11.13□□□□□ -0.63
LRCH3-206ENST00000438796 K7ENP7 123 aa11.12□□□□□ -0.63
LRCH3-206ENST00000438796 KLF5Q13887 457 aaPredicted RBP11.12□□□□□ -0.63
LRCH3-206ENST00000438796 WNK2Q9Y3S1 2297 aa11.12□□□□□ -0.63
LRCH3-206ENST00000438796 hADV29S1A0JD25 119 aa11.12□□□□□ -0.63
LRCH3-206ENST00000438796 LY6G5BQ8NDX9 201 aa11.12□□□□□ -0.63
LRCH3-206ENST00000438796 TMEM213A2RRL7 107 aa11.12□□□□□ -0.63
LRCH3-206ENST00000438796 TCF15Q12870 199 aa11.12□□□□□ -0.63
LRCH3-206ENST00000438796 SCRT2Q9NQ03 307 aa11.12□□□□□ -0.63
LRCH3-206ENST00000438796 IGHV4-4A0A075B6R2 117 aa11.12□□□□□ -0.63
LRCH3-206ENST00000438796 PRSS29PA6NIE9 313 aa11.12□□□□□ -0.63
LRCH3-206ENST00000438796 FAM120AOSQ5T036 256 aa11.12□□□□□ -0.63
LRCH3-206ENST00000438796 ASPHD1Q5U4P2 390 aa11.12□□□□□ -0.63
LRCH3-206ENST00000438796 COX11Q9Y6N1 276 aa11.12□□□□□ -0.63
LRCH3-206ENST00000438796 DUX4L9Q6RFH8 374 aaPredicted RBP11.11□□□□□ -0.63
LRCH3-206ENST00000438796 Q6ZQT7 251 aa11.11□□□□□ -0.63
LRCH3-206ENST00000438796 HAPLN4Q86UW8 402 aa11.11□□□□□ -0.63
LRCH3-206ENST00000438796 HEATR5AQ86XA9 2040 aa11.11□□□□□ -0.63
LRCH3-206ENST00000438796 NDUFB8O95169 186 aa11.11□□□□□ -0.63
LRCH3-206ENST00000438796 IGFBPL1Q8WX77 278 aa11.11□□□□□ -0.63
LRCH3-206ENST00000438796 SMPXQ9UHP9 88 aa11.11□□□□□ -0.63
LRCH3-206ENST00000438796 CD5LO43866 347 aa11.11□□□□□ -0.63
LRCH3-206ENST00000438796 PNRC2Q9NPJ4 139 aaKnown RBP11.11□□□□□ -0.63
LRCH3-206ENST00000438796 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.11□□□□□ -0.637e-7■■■□□ 18.9
LRCH3-206ENST00000438796 Q6ZS92 163 aa11.1□□□□□ -0.63
LRCH3-206ENST00000438796 TMEM256Q8N2U0 113 aa11.1□□□□□ -0.63
LRCH3-206ENST00000438796 STPG4Q8N801 248 aa11.1□□□□□ -0.63
LRCH3-206ENST00000438796 ABCA1O95477 2261 aa11.1□□□□□ -0.63
LRCH3-206ENST00000438796 FNDC1Q4ZHG4 1894 aaPredicted RBP11.1□□□□□ -0.63
LRCH3-206ENST00000438796 A0A1W2PPI3 338 aa11.1□□□□□ -0.63
LRCH3-206ENST00000438796 WDR81Q562E7 1941 aa11.1□□□□□ -0.63
LRCH3-206ENST00000438796 MMP23AO75900 390 aa11.1□□□□□ -0.63
LRCH3-206ENST00000438796 TEX36Q5VZQ5 186 aa11.1□□□□□ -0.63
LRCH3-206ENST00000438796 RNF5Q99942 180 aa11.1□□□□□ -0.63
LRCH3-206ENST00000438796 CHD3Q12873 2000 aaKnown RBP11.1□□□□□ -0.63
LRCH3-206ENST00000438796 SIPA1L1O43166 1804 aa11.1□□□□□ -0.63
LRCH3-206ENST00000438796 UBE2E1P51965 193 aa11.1□□□□□ -0.63
LRCH3-206ENST00000438796 NDUFS8O00217 210 aa11.1□□□□□ -0.63
LRCH3-206ENST00000438796 RNASE2P10153 161 aaKnown RBP11.1□□□□□ -0.63
LRCH3-206ENST00000438796 HIST1H2BLQ99880 126 aa11.1□□□□□ -0.63
LRCH3-206ENST00000438796 RPL18AQ02543 176 aaKnown RBP11.09□□□□□ -0.63
LRCH3-206ENST00000438796 ZNF362Q5T0B9 420 aaPredicted RBP11.09□□□□□ -0.63
LRCH3-206ENST00000438796 TMEM243Q9BU79 118 aa11.09□□□□□ -0.63
LRCH3-206ENST00000438796 NEUROG3Q9Y4Z2 214 aa11.09□□□□□ -0.63
LRCH3-206ENST00000438796 NCKAP5O14513 1909 aa11.09□□□□□ -0.63
LRCH3-206ENST00000438796 CLPSL1A2RUU4 121 aa11.09□□□□□ -0.63
LRCH3-206ENST00000438796 IGHV2-70DA0A0C4DH43 119 aa11.09□□□□□ -0.63
LRCH3-206ENST00000438796 DEFB136Q30KP8 78 aa11.09□□□□□ -0.63
LRCH3-206ENST00000438796 J3QRE1 110 aa11.08□□□□□ -0.64
LRCH3-206ENST00000438796 OVOL2Q9BRP0 275 aa11.08□□□□□ -0.64
LRCH3-206ENST00000438796 ZC2HC1BQ5TFG8 222 aa11.08□□□□□ -0.64
LRCH3-206ENST00000438796 LINC01551Q86U37 167 aa11.08□□□□□ -0.64
LRCH3-206ENST00000438796 I3L3M4 83 aa11.08□□□□□ -0.64
LRCH3-206ENST00000438796 KIR3DS1Q14943 382 aa11.08□□□□□ -0.64
LRCH3-206ENST00000438796 C15orf62A8K5M9 175 aa11.08□□□□□ -0.64
LRCH3-206ENST00000438796 CSRP3P50461 194 aa11.08□□□□□ -0.64
LRCH3-206ENST00000438796 MORN5Q5VZ52 161 aa11.08□□□□□ -0.64
LRCH3-206ENST00000438796 CHAC1Q9BUX1 264 aa11.08□□□□□ -0.64
LRCH3-206ENST00000438796 NOP10Q9NPE3 64 aaKnown RBP11.08□□□□□ -0.64
LRCH3-206ENST00000438796 MGAMO43451 1857 aa11.08□□□□□ -0.64
LRCH3-206ENST00000438796 GAS1P54826 345 aa11.08□□□□□ -0.64
LRCH3-206ENST00000438796 EP300Q09472 2414 aaPredicted RBP11.08□□□□□ -0.64
LRCH3-206ENST00000438796 SPINK8P0C7L1 97 aa11.07□□□□□ -0.64
LRCH3-206ENST00000438796 HAMPP81172 84 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms