RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 FSHBP01225 129 aa19.83■□□□□ 0.76
CPNE1-216ENST00000437340 C16orf54Q6UWD8 224 aa19.83■□□□□ 0.76
CPNE1-216ENST00000437340 PACRGQ96M98 296 aaPredicted RBP19.83■□□□□ 0.76
CPNE1-216ENST00000437340 FOXC2Q99958 501 aa19.83■□□□□ 0.76
CPNE1-216ENST00000437340 U3KQE9 123 aa19.83■□□□□ 0.76
CPNE1-216ENST00000437340 AKAP9Q99996 3911 aa19.82■□□□□ 0.76
CPNE1-216ENST00000437340 ARL3P36405 182 aa19.82■□□□□ 0.76
CPNE1-216ENST00000437340 OR5R1Q8NH85 324 aa19.82■□□□□ 0.76
CPNE1-216ENST00000437340 IGLV1-40P01703 118 aa19.81■□□□□ 0.76
CPNE1-216ENST00000437340 C9orf139Q6ZV77 190 aa19.81■□□□□ 0.76
CPNE1-216ENST00000437340 CREBBPQ92793 2442 aa19.81■□□□□ 0.76
CPNE1-216ENST00000437340 ZNF785A8K8V0 405 aa19.8■□□□□ 0.76
CPNE1-216ENST00000437340 AMBPP02760 352 aa19.8■□□□□ 0.76
CPNE1-216ENST00000437340 CRISP2P16562 243 aa19.8■□□□□ 0.76
CPNE1-216ENST00000437340 ZC2HC1AQ96GY0 325 aa19.8■□□□□ 0.76
CPNE1-216ENST00000437340 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.8■□□□□ 0.76
CPNE1-216ENST00000437340 IGHV4-59P01825 116 aa19.8■□□□□ 0.76
CPNE1-216ENST00000437340 CFHR3Q02985 330 aa19.8■□□□□ 0.76
CPNE1-216ENST00000437340 PYY3Q5JQD4 70 aa19.8■□□□□ 0.76
CPNE1-216ENST00000437340 Q6ZS46 218 aa19.8■□□□□ 0.76
CPNE1-216ENST00000437340 SLC50A1Q9BRV3 221 aa19.8■□□□□ 0.76
CPNE1-216ENST00000437340 A0A0G2JLM5 398 aa19.79■□□□□ 0.76
CPNE1-216ENST00000437340 RAB4BP61018 213 aa19.79■□□□□ 0.76
CPNE1-216ENST00000437340 COX8CQ7Z4L0 72 aa19.79■□□□□ 0.76
CPNE1-216ENST00000437340 TMEM18Q96B42 140 aa19.79■□□□□ 0.76
CPNE1-216ENST00000437340 NIT2Q9NQR4 276 aa19.79■□□□□ 0.76
CPNE1-216ENST00000437340 NDUFA4O00483 81 aa19.78■□□□□ 0.76
CPNE1-216ENST00000437340 CHEK1O14757 476 aa19.78■□□□□ 0.76
CPNE1-216ENST00000437340 Q0VG73 95 aa19.78■□□□□ 0.76
CPNE1-216ENST00000437340 IGHG4P01861 327 aa19.78■□□□□ 0.76
CPNE1-216ENST00000437340 PF4V1P10720 104 aa19.78■□□□□ 0.76
CPNE1-216ENST00000437340 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.78■□□□□ 0.76
CPNE1-216ENST00000437340 CSPG4Q6UVK1 2322 aa19.77■□□□□ 0.76
CPNE1-216ENST00000437340 A0A1B0GXF2 115 aa19.77■□□□□ 0.76
CPNE1-216ENST00000437340 SAPCD1Q5SSQ6 148 aa19.77■□□□□ 0.76
CPNE1-216ENST00000437340 GTSF1Q8WW33 167 aa19.77■□□□□ 0.76
CPNE1-216ENST00000437340 GRIFINA4D1Z8 144 aa19.76■□□□□ 0.75
CPNE1-216ENST00000437340 CT45A10P0DMU9 189 aa19.76■□□□□ 0.75
CPNE1-216ENST00000437340 FOXA3P55318 350 aaPredicted RBP19.76■□□□□ 0.75
CPNE1-216ENST00000437340 S100A12P80511 92 aa19.76■□□□□ 0.75
CPNE1-216ENST00000437340 DNLZQ5SXM8 178 aa19.76■□□□□ 0.75
CPNE1-216ENST00000437340 RBPMS2Q6ZRY4 209 aaKnown RBP19.76■□□□□ 0.75
CPNE1-216ENST00000437340 TCF24Q7RTU0 167 aa19.76■□□□□ 0.75
CPNE1-216ENST00000437340 APCSP02743 223 aa19.75■□□□□ 0.75
CPNE1-216ENST00000437340 OR2D3Q8NGH3 330 aa19.75■□□□□ 0.75
CPNE1-216ENST00000437340 KLK15Q9H2R5 256 aa19.75■□□□□ 0.75
CPNE1-216ENST00000437340 ZFHX3Q15911 3703 aa19.75■□□□□ 0.75
CPNE1-216ENST00000437340 PCP4L1A6NKN8 68 aa19.75■□□□□ 0.75
CPNE1-216ENST00000437340 APOHP02749 345 aaPredicted RBP19.75■□□□□ 0.75
CPNE1-216ENST00000437340 ESDP10768 282 aa19.75■□□□□ 0.75
CPNE1-216ENST00000437340 LCN12Q6JVE5 192 aa19.75■□□□□ 0.75
CPNE1-216ENST00000437340 Q71RC1 249 aaPredicted RBP19.75■□□□□ 0.75
CPNE1-216ENST00000437340 IGKV2-40A0A087WW87 121 aaPredicted RBP19.74■□□□□ 0.75
CPNE1-216ENST00000437340 IGKV2D-40P01614 121 aaPredicted RBP19.74■□□□□ 0.75
CPNE1-216ENST00000437340 OR10J3Q5JRS4 329 aa19.74■□□□□ 0.75
CPNE1-216ENST00000437340 FAM209BQ5JX69 171 aa19.74■□□□□ 0.75
CPNE1-216ENST00000437340 TMEM256Q8N2U0 113 aa19.74■□□□□ 0.75
CPNE1-216ENST00000437340 TP53TG3Q9ULZ0 132 aa19.74■□□□□ 0.75
CPNE1-216ENST00000437340 CRIP1P50238 77 aa19.73■□□□□ 0.75
CPNE1-216ENST00000437340 HBBP68871 147 aa19.73■□□□□ 0.75
CPNE1-216ENST00000437340 IGHV3-66A0A0C4DH42 116 aa19.72■□□□□ 0.75
CPNE1-216ENST00000437340 TMEM89A2RUT3 159 aa19.72■□□□□ 0.75
CPNE1-216ENST00000437340 RBAKDNA6NC62 111 aa19.72■□□□□ 0.75
CPNE1-216ENST00000437340 SMAD7O15105 426 aaKnown RBP19.72■□□□□ 0.75
CPNE1-216ENST00000437340 TRBV12-3P01733 135 aa19.72■□□□□ 0.75
CPNE1-216ENST00000437340 CYB5R2Q6BCY4 276 aa19.72■□□□□ 0.75
CPNE1-216ENST00000437340 Q6YL49 198 aa19.72■□□□□ 0.75
CPNE1-216ENST00000437340 OR4X2Q8NGF9 303 aa19.72■□□□□ 0.75
CPNE1-216ENST00000437340 MRPL53Q96EL3 112 aaKnown RBP19.72■□□□□ 0.75
CPNE1-216ENST00000437340 PRR25Q96S07 402 aa19.72■□□□□ 0.75
CPNE1-216ENST00000437340 VPREB3Q9UKI3 123 aa19.72■□□□□ 0.75
CPNE1-216ENST00000437340 FLNAP21333 2647 aaKnown RBP19.72■□□□□ 0.75
CPNE1-216ENST00000437340 A0A1B0GUS0 222 aa19.72■□□□□ 0.75
CPNE1-216ENST00000437340 ZNF207O43670 478 aaKnown RBP19.72■□□□□ 0.75
CPNE1-216ENST00000437340 C8orf49Q96NF6 230 aa19.72■□□□□ 0.75
CPNE1-216ENST00000437340 CLEC5AQ9NY25 188 aa19.72■□□□□ 0.75
CPNE1-216ENST00000437340 HLA-DMBP28068 263 aa19.71■□□□□ 0.75
CPNE1-216ENST00000437340 GDF5OSQ5U4N7 250 aa19.71■□□□□ 0.75
CPNE1-216ENST00000437340 GLMPQ8WWB7 406 aa19.71■□□□□ 0.75
CPNE1-216ENST00000437340 TEX15Q9BXT5 2789 aa19.71■□□□□ 0.75
CPNE1-216ENST00000437340 SLAQ13239 276 aa19.7■□□□□ 0.74
CPNE1-216ENST00000437340 IGFL4Q6B9Z1 124 aa19.7■□□□□ 0.74
CPNE1-216ENST00000437340 BAGE3Q86Y29 109 aa19.7■□□□□ 0.74
CPNE1-216ENST00000437340 PGLYRP4Q96LB8 373 aa19.7■□□□□ 0.74
CPNE1-216ENST00000437340 PRDM13Q9H4Q3 707 aa19.7■□□□□ 0.74
CPNE1-216ENST00000437340 IGHV3OR16-13A0A075B7E8 117 aa19.7■□□□□ 0.74
CPNE1-216ENST00000437340 IGHV3-74A0A0B4J1X5 117 aa19.7■□□□□ 0.74
CPNE1-216ENST00000437340 ZNF705FA8MVS1 300 aaPredicted RBP19.7■□□□□ 0.74
CPNE1-216ENST00000437340 IGHV3-11P01762 117 aa19.7■□□□□ 0.74
CPNE1-216ENST00000437340 KIAA1644Q3SXP7 199 aa19.7■□□□□ 0.74
CPNE1-216ENST00000437340 ASCL2Q99929 193 aa19.7■□□□□ 0.74
CPNE1-216ENST00000437340 A8MWP6 167 aa19.69■□□□□ 0.74
CPNE1-216ENST00000437340 NUPR1O60356 82 aa19.69■□□□□ 0.74
CPNE1-216ENST00000437340 PSMB8P28062 276 aa19.69■□□□□ 0.74
CPNE1-216ENST00000437340 JOSD1Q15040 202 aaPredicted RBP19.69■□□□□ 0.74
CPNE1-216ENST00000437340 FAM162BQ5T6X4 162 aa19.69■□□□□ 0.74
CPNE1-216ENST00000437340 Q6AWC8 147 aa19.69■□□□□ 0.74
CPNE1-216ENST00000437340 UNQ9165/PRO28630Q6UXU0 137 aa19.69■□□□□ 0.74
CPNE1-216ENST00000437340 C8orf86Q6ZUL3 223 aa19.69■□□□□ 0.74
CPNE1-216ENST00000437340 VGLL1Q99990 258 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms