RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 K7EPK0 472 aa5.45□□□□□ -1.54
VPS50-203ENST00000436177 TSC22D2O75157 780 aa5.45□□□□□ -1.54
VPS50-203ENST00000436177 RLN2P04090 185 aa5.45□□□□□ -1.54
VPS50-203ENST00000436177 AZU1P20160 251 aa5.45□□□□□ -1.54
VPS50-203ENST00000436177 M6PRP20645 277 aa5.45□□□□□ -1.54
VPS50-203ENST00000436177 BCAP31P51572 246 aa5.45□□□□□ -1.54
VPS50-203ENST00000436177 TAS2R30P59541 319 aa5.45□□□□□ -1.54
VPS50-203ENST00000436177 PLP1P60201 277 aa5.45□□□□□ -1.54
VPS50-203ENST00000436177 FCN2Q15485 313 aa5.45□□□□□ -1.54
VPS50-203ENST00000436177 SSX7Q7RTT5 188 aa5.45□□□□□ -1.54
VPS50-203ENST00000436177 LINC00305Q7Z4B0 112 aa5.45□□□□□ -1.54
VPS50-203ENST00000436177 RNF141Q8WVD5 230 aa5.45□□□□□ -1.54
VPS50-203ENST00000436177 C20orf144Q9BQM9 153 aa5.45□□□□□ -1.54
VPS50-203ENST00000436177 ABCA13Q86UQ4 5058 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 TRAV26-1A0A087WT03 109 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 FAM25EA8MYX2 175 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 AGPAT2O15120 278 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 PRM2P04554 102 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 OR4E1P0C645 316 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 LEPP41159 167 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 CAV2P51636 162 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 C10orf113Q5VZT2 155 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 TMEM14EPQ6UXP3 125 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 Q6ZRG5 221 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 ZBTB8BQ8NAP8 495 aaPredicted RBP5.44□□□□□ -1.54
VPS50-203ENST00000436177 ZNRF2Q8NHG8 242 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 C17orf77Q96MU5 243 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 GGACTQ9BVM4 153 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 ZNF331Q9NQX6 463 aaPredicted RBP5.44□□□□□ -1.54
VPS50-203ENST00000436177 FLVCR2Q9UPI3 526 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 FAT2Q9NYQ8 4349 aa5.44□□□□□ -1.54
VPS50-203ENST00000436177 TRGV2A0A075B6R0 118 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 GAGE12BA1L429 117 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 PLAC8L1A1L4L8 177 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 H3BTX0 84 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 J3KRW8 73 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 CCNKO75909 580 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 GAGE7O76087 117 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 SNRPCP09234 159 aaKnown RBP5.43□□□□□ -1.54
VPS50-203ENST00000436177 GAGE12FP0CL80 117 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 GAGE12GP0CL81 117 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 GAGE12IP0CL82 117 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 PRB4P10163 310 aaPredicted RBP5.43□□□□□ -1.54
VPS50-203ENST00000436177 PVALBP20472 110 aaPredicted RBP5.43□□□□□ -1.54
VPS50-203ENST00000436177 CAMLGP49069 296 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 GUK1Q16774 197 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 CNPY1Q3B7I2 92 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 C12orf45Q8N5I9 185 aaPredicted RBP5.43□□□□□ -1.54
VPS50-203ENST00000436177 OR1L4Q8NGR5 311 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 RNASE8Q8TDE3 154 aaKnown RBP5.43□□□□□ -1.54
VPS50-203ENST00000436177 RXFP4Q8TDU9 374 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 ZNF503Q96F45 646 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 PFDN5Q99471 154 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 SRRQ9GZT4 340 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 LINC00588Q9Y4M8 146 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 DNAH2Q9P225 4427 aa5.43□□□□□ -1.54
VPS50-203ENST00000436177 TRAV12-3A0A0B4J271 114 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 A0A0J9YY99 117 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 C5orf51A6NDU8 294 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 ZNF701M0R085 212 aaPredicted RBP5.42□□□□□ -1.54
VPS50-203ENST00000436177 CDK2AP2O75956 126 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 S100A10P60903 97 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 HBG1P69891 147 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 HBG2P69892 147 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 OPCMLQ14982 345 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 GFI1BQ5VTD9 330 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 PATE2Q6UY27 113 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 STX12Q86Y82 276 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 MAPKAPK5-AS1Q8N8E1 139 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 ZNF680Q8NEM1 530 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 MITD1Q8WV92 249 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 PYGO2Q9BRQ0 406 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 Q9H8V8 135 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 DNAJC4Q9NNZ3 241 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 UQCC1Q9NVA1 299 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 RCL1Q9Y2P8 373 aaKnown RBP5.42□□□□□ -1.54
VPS50-203ENST00000436177 LSM5Q9Y4Y9 91 aaKnown RBP5.42□□□□□ -1.54
VPS50-203ENST00000436177 MUC4Q99102 2169 aa5.42□□□□□ -1.54
VPS50-203ENST00000436177 DYNC1H1Q14204 4646 aaKnown RBP5.41□□□□□ -1.54
VPS50-203ENST00000436177 DNAH17Q9UFH2 4485 aa5.41□□□□□ -1.54
VPS50-203ENST00000436177 UBE2L5PA0A1B0GUS4 154 aa5.41□□□□□ -1.54
VPS50-203ENST00000436177 C7orf66A4D0T2 115 aa5.41□□□□□ -1.54
VPS50-203ENST00000436177 SLC17A3O00476 420 aa5.41□□□□□ -1.54
VPS50-203ENST00000436177 MBPP02686 304 aaPredicted RBP5.41□□□□□ -1.54
VPS50-203ENST00000436177 BAXQ07812 192 aa5.41□□□□□ -1.54
VPS50-203ENST00000436177 NRARPQ7Z6K4 114 aa5.41□□□□□ -1.54
VPS50-203ENST00000436177 ODF3Q96PU9 254 aa5.41□□□□□ -1.54
VPS50-203ENST00000436177 MGST2Q99735 147 aa5.41□□□□□ -1.54
VPS50-203ENST00000436177 PARD6GQ9BYG4 376 aaPredicted RBP5.41□□□□□ -1.54
VPS50-203ENST00000436177 C20orf85Q9H1P6 137 aa5.41□□□□□ -1.54
VPS50-203ENST00000436177 AAMDCQ9H7C9 122 aa5.41□□□□□ -1.54
VPS50-203ENST00000436177 PTTG2Q9NZH5 202 aa5.41□□□□□ -1.54
VPS50-203ENST00000436177 TIMM9Q9Y5J7 89 aa5.41□□□□□ -1.54
VPS50-203ENST00000436177 TRGV1A0A0A0MS02 117 aa5.4□□□□□ -1.54
VPS50-203ENST00000436177 A0A1W2PPQ1 181 aa5.4□□□□□ -1.54
VPS50-203ENST00000436177 C7orf71A4D174 169 aa5.4□□□□□ -1.54
VPS50-203ENST00000436177 H3BNG1 76 aa5.4□□□□□ -1.54
VPS50-203ENST00000436177 CCSO14618 274 aa5.4□□□□□ -1.54
VPS50-203ENST00000436177 MRPS12O15235 138 aaKnown RBP5.4□□□□□ -1.54
VPS50-203ENST00000436177 CST7O76096 145 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms