RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 STAG3L3P0CL85 134 aa13.19□□□□□ -0.3
SMG1P3-201ENST00000435197 SULT1A2P50226 295 aa13.19□□□□□ -0.3
SMG1P3-201ENST00000435197 APRG1Q8IVJ8 170 aa13.19□□□□□ -0.3
SMG1P3-201ENST00000435197 GBGT1Q8N5D6 347 aa13.19□□□□□ -0.3
SMG1P3-201ENST00000435197 OR11H2Q8NH07 326 aa13.19□□□□□ -0.3
SMG1P3-201ENST00000435197 FAM213BQ8TBF2 198 aa13.19□□□□□ -0.3
SMG1P3-201ENST00000435197 HRH4Q9H3N8 390 aa13.19□□□□□ -0.3
SMG1P3-201ENST00000435197 IGLL5B9A064 214 aa13.18□□□□□ -0.3
SMG1P3-201ENST00000435197 CXorf1O96002 111 aa13.18□□□□□ -0.3
SMG1P3-201ENST00000435197 IGLC2P0DOY2 106 aa13.18□□□□□ -0.3
SMG1P3-201ENST00000435197 HIST1H1EP10412 219 aaKnown RBP13.18□□□□□ -0.3
SMG1P3-201ENST00000435197 CMC4P56277 68 aaPredicted RBP13.18□□□□□ -0.3
SMG1P3-201ENST00000435197 ALKAL2Q6UX46 152 aa13.18□□□□□ -0.3
SMG1P3-201ENST00000435197 RNF141Q8WVD5 230 aa13.18□□□□□ -0.3
SMG1P3-201ENST00000435197 DEFB4AO15263 64 aa13.17□□□□□ -0.3
SMG1P3-201ENST00000435197 HMGB3O15347 200 aaKnown RBP13.17□□□□□ -0.3
SMG1P3-201ENST00000435197 ID1P41134 155 aa13.17□□□□□ -0.3
SMG1P3-201ENST00000435197 TFPI2P48307 235 aa13.17□□□□□ -0.3
SMG1P3-201ENST00000435197 ZNF726P1Q15940 193 aa13.17□□□□□ -0.3
SMG1P3-201ENST00000435197 ZNF124Q15973 351 aa13.17□□□□□ -0.3
SMG1P3-201ENST00000435197 LCN15Q6UWW0 184 aa13.17□□□□□ -0.3
SMG1P3-201ENST00000435197 LRRC20Q8TCA0 184 aa13.17□□□□□ -0.3
SMG1P3-201ENST00000435197 DCANP1Q8TF63 244 aa13.17□□□□□ -0.3
SMG1P3-201ENST00000435197 FAT2Q9NYQ8 4349 aa13.16□□□□□ -0.3
SMG1P3-201ENST00000435197 K7EQG2 157 aa13.16□□□□□ -0.3
SMG1P3-201ENST00000435197 H2AFB1P0C5Y9 115 aa13.16□□□□□ -0.3
SMG1P3-201ENST00000435197 NBEAP1P0C6P0 100 aa13.16□□□□□ -0.3
SMG1P3-201ENST00000435197 ARL14EPLP0DKL9 152 aa13.16□□□□□ -0.3
SMG1P3-201ENST00000435197 PYYP10082 97 aa13.16□□□□□ -0.3
SMG1P3-201ENST00000435197 FHITP49789 147 aa13.16□□□□□ -0.3
SMG1P3-201ENST00000435197 TEX261Q6UWH6 196 aa13.16□□□□□ -0.3
SMG1P3-201ENST00000435197 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.16□□□□□ -0.3
SMG1P3-201ENST00000435197 MBD3L1Q8WWY6 194 aa13.16□□□□□ -0.3
SMG1P3-201ENST00000435197 FXYD5Q96DB9 178 aa13.16□□□□□ -0.3
SMG1P3-201ENST00000435197 PKHD1P08F94 4074 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 MAP1LC3B2A6NCE7 125 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 C11orf94C9JXX5 98 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 H3BQ15 152 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 TEX46H3BTG2 121 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 ISLRO14498 428 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 IFNA7P01567 189 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 OR10J4P0C629 311 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 SNRPD3P62318 126 aaKnown RBP13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 UBE2L3P68036 154 aaKnown RBP13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 PDE6HQ13956 83 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 SSX7Q7RTT5 188 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 SFT2D1Q8WV19 159 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 ZNF503Q96F45 646 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 C16orf92Q96LL3 132 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 SLC50A1Q9BRV3 221 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 MAP1LC3BQ9GZQ8 125 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 TMEM167BQ9NRX6 74 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 ZNF586Q9NXT0 402 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 CLEC5AQ9NY25 188 aa13.15□□□□□ -0.3
SMG1P3-201ENST00000435197 TRBV19A0A075B6N1 114 aa13.14□□□□□ -0.31
SMG1P3-201ENST00000435197 ZNF705EA8MWA4 302 aaPredicted RBP13.14□□□□□ -0.31
SMG1P3-201ENST00000435197 ZNF253O75346 499 aa13.14□□□□□ -0.31
SMG1P3-201ENST00000435197 EIF3GO75821 320 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMG1P3-201ENST00000435197 GCHFRP30047 84 aa13.14□□□□□ -0.31
SMG1P3-201ENST00000435197 PSMB3P49720 205 aa13.14□□□□□ -0.31
SMG1P3-201ENST00000435197 PSG9Q00887 426 aa13.14□□□□□ -0.31
SMG1P3-201ENST00000435197 FAM74A1Q5RGS3 127 aa13.14□□□□□ -0.31
SMG1P3-201ENST00000435197 BLNKQ8WV28 456 aa13.14□□□□□ -0.31
SMG1P3-201ENST00000435197 C17orf77Q96MU5 243 aa13.14□□□□□ -0.31
SMG1P3-201ENST00000435197 DYNC1H1Q14204 4646 aaKnown RBP13.14□□□□□ -0.31
SMG1P3-201ENST00000435197 PRSS29PA6NIE9 313 aa13.13□□□□□ -0.31
SMG1P3-201ENST00000435197 BLOC1S1P78537 153 aa13.13□□□□□ -0.31
SMG1P3-201ENST00000435197 IQCF2Q8IXL9 164 aa13.13□□□□□ -0.31
SMG1P3-201ENST00000435197 ZNF680Q8NEM1 530 aa13.13□□□□□ -0.31
SMG1P3-201ENST00000435197 SAT2Q96F10 170 aaPredicted RBP13.13□□□□□ -0.31
SMG1P3-201ENST00000435197 KRTAP4-5Q9BYR2 181 aa13.13□□□□□ -0.31
SMG1P3-201ENST00000435197 DNAH2Q9P225 4427 aa13.12□□□□□ -0.31
SMG1P3-201ENST00000435197 TRAV1-1A0A0B4J248 108 aa13.12□□□□□ -0.31
SMG1P3-201ENST00000435197 SOCS3O14543 225 aa13.12□□□□□ -0.31
SMG1P3-201ENST00000435197 HBE1P02100 147 aa13.12□□□□□ -0.31
SMG1P3-201ENST00000435197 SNRPCP09234 159 aaKnown RBP13.12□□□□□ -0.31
SMG1P3-201ENST00000435197 LYPD1Q8N2G4 141 aa13.12□□□□□ -0.31
SMG1P3-201ENST00000435197 SUN5Q8TC36 379 aa13.12□□□□□ -0.31
SMG1P3-201ENST00000435197 ZNF331Q9NQX6 463 aaPredicted RBP13.12□□□□□ -0.31
SMG1P3-201ENST00000435197 DNAH11Q96DT5 4516 aa13.11□□□□□ -0.31
SMG1P3-201ENST00000435197 H3BTX0 84 aa13.11□□□□□ -0.31
SMG1P3-201ENST00000435197 CA1P00915 261 aaPredicted RBP13.11□□□□□ -0.31
SMG1P3-201ENST00000435197 FGF8P55075 233 aaPredicted RBP13.11□□□□□ -0.31
SMG1P3-201ENST00000435197 AAMDCQ9H7C9 122 aa13.11□□□□□ -0.31
SMG1P3-201ENST00000435197 DNAH17Q9UFH2 4485 aa13.11□□□□□ -0.31
SMG1P3-201ENST00000435197 IGHV4-4A0A075B6R2 117 aa13.1□□□□□ -0.31
SMG1P3-201ENST00000435197 RTL8CO15255 209 aa13.1□□□□□ -0.31
SMG1P3-201ENST00000435197 NDUFB4O95168 129 aa13.1□□□□□ -0.31
SMG1P3-201ENST00000435197 ZNF688P0C7X2 276 aa13.1□□□□□ -0.31
SMG1P3-201ENST00000435197 PPT1P50897 306 aa13.1□□□□□ -0.31
SMG1P3-201ENST00000435197 Q8NAQ8 132 aa13.1□□□□□ -0.31
SMG1P3-201ENST00000435197 LINC00052Q96N35 136 aa13.1□□□□□ -0.31
SMG1P3-201ENST00000435197 PRELID1Q9Y255 219 aa13.1□□□□□ -0.31
SMG1P3-201ENST00000435197 TRAV8-2A0A0B4J237 113 aa13.09□□□□□ -0.31
SMG1P3-201ENST00000435197 SLC17A3O00476 420 aa13.09□□□□□ -0.31
SMG1P3-201ENST00000435197 RANP62826 216 aaKnown RBP13.09□□□□□ -0.31
SMG1P3-201ENST00000435197 PSG3Q16557 428 aa13.09□□□□□ -0.31
SMG1P3-201ENST00000435197 PSMG4Q5JS54 123 aa13.09□□□□□ -0.31
SMG1P3-201ENST00000435197 FAM24BQ8N5W8 94 aa13.09□□□□□ -0.31
SMG1P3-201ENST00000435197 TMPRSS5Q9H3S3 457 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms