RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 DERL1Q9BUN8 251 aa8.53□□□□□ -1.04
LINC00539-203ENST00000434601 ZNF331Q9NQX6 463 aaPredicted RBP8.53□□□□□ -1.04
LINC00539-203ENST00000434601 EPDR1Q9UM22 224 aa8.53□□□□□ -1.04
LINC00539-203ENST00000434601 RPH3ALQ9UNE2 315 aa8.53□□□□□ -1.04
LINC00539-203ENST00000434601 FOLR2P14207 255 aa8.52□□□□□ -1.05
LINC00539-203ENST00000434601 CBLN1P23435 193 aa8.52□□□□□ -1.05
LINC00539-203ENST00000434601 TCF24Q7RTU0 167 aa8.52□□□□□ -1.05
LINC00539-203ENST00000434601 ATG101Q9BSB4 218 aa8.52□□□□□ -1.05
LINC00539-203ENST00000434601 NAT8Q9UHE5 227 aa8.52□□□□□ -1.05
LINC00539-203ENST00000434601 C9JCJ5 164 aa8.51□□□□□ -1.05
LINC00539-203ENST00000434601 SNAPINO95295 136 aa8.51□□□□□ -1.05
LINC00539-203ENST00000434601 TCRAP04437 139 aa8.51□□□□□ -1.05
LINC00539-203ENST00000434601 RPL35P42766 123 aaKnown RBP8.51□□□□□ -1.05
LINC00539-203ENST00000434601 CSN1S1P47710 185 aa8.51□□□□□ -1.05
LINC00539-203ENST00000434601 CNN1P51911 297 aaKnown RBP8.51□□□□□ -1.05
LINC00539-203ENST00000434601 RPL11P62913 178 aaKnown RBP8.51□□□□□ -1.05
LINC00539-203ENST00000434601 PNRC1Q12796 327 aaPredicted RBP8.51□□□□□ -1.05
LINC00539-203ENST00000434601 SAMD13Q5VXD3 122 aa8.51□□□□□ -1.05
LINC00539-203ENST00000434601 TVP23CQ96ET8 276 aa8.51□□□□□ -1.05
LINC00539-203ENST00000434601 NRN1Q9NPD7 142 aa8.51□□□□□ -1.05
LINC00539-203ENST00000434601 PRELID1Q9Y255 219 aa8.51□□□□□ -1.05
LINC00539-203ENST00000434601 TRAV8-2A0A0B4J237 113 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 M0R036 132 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 M0R3E3 92 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 SOCS3O14543 225 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 PRB2P02812 416 aaPredicted RBP8.5□□□□□ -1.05
LINC00539-203ENST00000434601 CSN3P07498 182 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 HLA-DMBP28068 263 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 COL7A1Q02388 2944 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 TMEM241Q24JQ0 296 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 OXLD1Q5BKU9 147 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 ADAMTSL5Q6ZMM2 481 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 NBEAL2Q6ZNJ1 2754 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 ARL6IP6Q8N6S5 226 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 CLRN3Q8NCR9 226 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 MRPL53Q96EL3 112 aaKnown RBP8.5□□□□□ -1.05
LINC00539-203ENST00000434601 C16orf92Q96LL3 132 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 SDF2L1Q9HCN8 221 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 CLEC5AQ9NY25 188 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 MLXQ9UH92 298 aa8.5□□□□□ -1.05
LINC00539-203ENST00000434601 TRBV20OR9-2A0A075B6H5 130 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 IGKV3-7A0A075B6H7 116 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 SERTM2A0A1B0GWG4 89 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 DIRC3C9JPN6 131 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 OVOL1O14753 267 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 S100A9P06702 114 aaKnown RBP8.49□□□□□ -1.05
LINC00539-203ENST00000434601 TAS2R60P59551 318 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 UBE2G1P62253 170 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 ADIRFQ15847 76 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 TMEM183BQ1AE95 376 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 CENPWQ5EE01 88 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 IGFL4Q6B9Z1 124 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 GOLT1AQ6ZVE7 132 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 DYNLRB2Q8TF09 96 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 FMC1Q96HJ9 113 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 IGF2BP2-AS1Q96M15 143 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 SELENOKQ9Y6D0 94 aa8.49□□□□□ -1.05
LINC00539-203ENST00000434601 TRAV34A0A0B4J273 112 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 K7EQM0 130 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 ISLRO14498 428 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 PF4P02776 101 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 CD33P20138 364 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 GNG4P50150 75 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 RPL23P62829 140 aaKnown RBP8.48□□□□□ -1.05
LINC00539-203ENST00000434601 RHEBQ15382 184 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 ATRAIDQ6UW56 229 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 Q86TA4 180 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 RNF182Q8N6D2 247 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 TMEM75Q8N9X5 138 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 DCANP1Q8TF63 244 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 LINC00479Q96M42 142 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 MS4A6AQ9H2W1 248 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 AURKAIP1Q9NWT8 199 aaPredicted RBP8.48□□□□□ -1.05
LINC00539-203ENST00000434601 KLF12Q9Y4X4 402 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 LY96Q9Y6Y9 160 aa8.48□□□□□ -1.05
LINC00539-203ENST00000434601 IGKV2-40A0A087WW87 121 aaPredicted RBP8.47□□□□□ -1.05
LINC00539-203ENST00000434601 TRBV6-1A0A0K0K1D8 114 aa8.47□□□□□ -1.05
LINC00539-203ENST00000434601 PGPEP1LA6NFU8 196 aa8.47□□□□□ -1.05
LINC00539-203ENST00000434601 IGKV2D-40P01614 121 aaPredicted RBP8.47□□□□□ -1.05
LINC00539-203ENST00000434601 PSG3Q16557 428 aa8.47□□□□□ -1.05
LINC00539-203ENST00000434601 LCN12Q6JVE5 192 aa8.47□□□□□ -1.05
LINC00539-203ENST00000434601 LINC01551Q86U37 167 aa8.47□□□□□ -1.05
LINC00539-203ENST00000434601 GBGT1Q8N5D6 347 aa8.47□□□□□ -1.05
LINC00539-203ENST00000434601 WFDC9Q8NEX5 89 aa8.47□□□□□ -1.05
LINC00539-203ENST00000434601 C20orf173Q96LM9 149 aa8.47□□□□□ -1.05
LINC00539-203ENST00000434601 SIGLEC8Q9NYZ4 499 aa8.47□□□□□ -1.05
LINC00539-203ENST00000434601 TRAV8-1A0A0A6YYK1 113 aa8.46□□□□□ -1.06
LINC00539-203ENST00000434601 FBLL1A6NHQ2 334 aaKnown RBP8.46□□□□□ -1.06
LINC00539-203ENST00000434601 ZNF705FA8MVS1 300 aaPredicted RBP8.46□□□□□ -1.06
LINC00539-203ENST00000434601 B4DEV8 164 aa8.46□□□□□ -1.06
LINC00539-203ENST00000434601 K7EQG2 157 aa8.46□□□□□ -1.06
LINC00539-203ENST00000434601 DNASE2O00115 360 aaPredicted RBP8.46□□□□□ -1.06
LINC00539-203ENST00000434601 IGLV2-11P01706 119 aa8.46□□□□□ -1.06
LINC00539-203ENST00000434601 PRB4P10163 310 aaPredicted RBP8.46□□□□□ -1.06
LINC00539-203ENST00000434601 ID1P41134 155 aa8.46□□□□□ -1.06
LINC00539-203ENST00000434601 PAFAH1B2P68402 229 aa8.46□□□□□ -1.06
LINC00539-203ENST00000434601 FLI1Q01543 452 aaPredicted RBP8.46□□□□□ -1.06
LINC00539-203ENST00000434601 BAGE2Q86Y30 109 aa8.46□□□□□ -1.06
LINC00539-203ENST00000434601 ZNF738Q8NE65 137 aa8.46□□□□□ -1.06
LINC00539-203ENST00000434601 SMIM12Q96EX1 92 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms