RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ATOH7Q8N100 152 aa8.1□□□□□ -1.11
CD44-210ENST00000434472 MRPL53Q96EL3 112 aaKnown RBP8.1□□□□□ -1.11
CD44-210ENST00000434472 TPPP3Q9BW30 176 aa8.1□□□□□ -1.11
CD44-210ENST00000434472 BPESC1Q9GZL8 116 aa8.1□□□□□ -1.11
CD44-210ENST00000434472 ZFAND3Q9H8U3 227 aa8.1□□□□□ -1.11
CD44-210ENST00000434472 AP5S1Q9NUS5 200 aa8.1□□□□□ -1.11
CD44-210ENST00000434472 FABP5P3A8MUU1 101 aa8.09□□□□□ -1.11
CD44-210ENST00000434472 M0QZ24 198 aa8.09□□□□□ -1.11
CD44-210ENST00000434472 CLEC3BP05452 202 aa8.09□□□□□ -1.11
CD44-210ENST00000434472 ZNF25P17030 456 aaPredicted RBP8.09□□□□□ -1.11
CD44-210ENST00000434472 TSPOP30536 169 aa8.09□□□□□ -1.11
CD44-210ENST00000434472 LY6DQ14210 128 aa8.09□□□□□ -1.11
CD44-210ENST00000434472 FER1L6-AS1Q8NA97 138 aa8.09□□□□□ -1.11
CD44-210ENST00000434472 OR10AG1Q8NH19 301 aa8.09□□□□□ -1.11
CD44-210ENST00000434472 MS4A6AQ9H2W1 248 aa8.09□□□□□ -1.11
CD44-210ENST00000434472 CEP295Q9C0D2 2601 aa8.08□□□□□ -1.12
CD44-210ENST00000434472 BUB3O43684 328 aa8.08□□□□□ -1.12
CD44-210ENST00000434472 CSN3P07498 182 aa8.08□□□□□ -1.12
CD44-210ENST00000434472 IGLL1P15814 213 aa8.08□□□□□ -1.12
CD44-210ENST00000434472 CRIP2P52943 208 aaPredicted RBP8.08□□□□□ -1.12
CD44-210ENST00000434472 ATP5G2Q06055 141 aa8.08□□□□□ -1.12
CD44-210ENST00000434472 PRR31Q5SQ13 230 aa8.08□□□□□ -1.12
CD44-210ENST00000434472 ORMDL3Q8N138 153 aa8.08□□□□□ -1.12
CD44-210ENST00000434472 C5orf56Q8N8D9 126 aa8.08□□□□□ -1.12
CD44-210ENST00000434472 PRELID3AQ96N28 172 aa8.08□□□□□ -1.12
CD44-210ENST00000434472 METTL26Q96S19 204 aa8.08□□□□□ -1.12
CD44-210ENST00000434472 ASCL2Q99929 193 aa8.08□□□□□ -1.12
CD44-210ENST00000434472 HIF1ANQ9NWT6 349 aa8.08□□□□□ -1.12
CD44-210ENST00000434472 MOB4Q9Y3A3 225 aa8.08□□□□□ -1.12
CD44-210ENST00000434472 SPTBN2O15020 2390 aa8.08□□□□□ -1.12
CD44-210ENST00000434472 TMSB15BA0A087X1C1 80 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 FAM223BA6NKX1 122 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 IGHG4P01861 327 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 IGLC6P0CF74 106 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 PAX8Q06710 450 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 CLEC19AQ6UXS0 136 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 SPATA12Q7Z6I5 190 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 FAM223AQ8IWN6 122 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 VGLL1Q99990 258 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 BSNQ9UPA5 3926 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 DLEU1O43261 78 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 GNLYP22749 145 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 G0S2P27469 103 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 ZNF138P52744 262 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 MAJINQ3KP22 176 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 CCDC140Q96MF4 163 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 PIMREGQ9BSJ6 248 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 ARHGAP32A7KAX9 2087 aa8.07□□□□□ -1.12
CD44-210ENST00000434472 ABCA4P78363 2273 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 TRAV41A0A0B4J266 112 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 IGHV1-69DA0A0B4J2H0 117 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 TMEM213A2RRL7 107 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 D6R8Y8 96 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 NDUFS8O00217 210 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 IGHV1-69P01742 117 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 PPBPP02775 128 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 HLA-DMBP28068 263 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 HIST1H1AQ02539 215 aaPredicted RBP8.06□□□□□ -1.12
CD44-210ENST00000434472 TWIST1Q15672 202 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 LINC01559Q495D7 138 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 MRPL51Q4U2R6 128 aaKnown RBP8.06□□□□□ -1.12
CD44-210ENST00000434472 LINC01545Q5VT33 79 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 LINC00173Q6ZV60 143 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 PIP4P2Q8N4L2 257 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 PMCHL2Q9BQD1 86 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 TMEM208Q9BTX3 173 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 ZNF747Q9BV97 191 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 U3KQE9 123 aa8.06□□□□□ -1.12
CD44-210ENST00000434472 TPRP12270 2363 aaKnown RBP8.05□□□□□ -1.12
CD44-210ENST00000434472 SPTA1P02549 2419 aa8.05□□□□□ -1.12
CD44-210ENST00000434472 CLPSL1A2RUU4 121 aa8.05□□□□□ -1.12
CD44-210ENST00000434472 G3V318 75 aa8.05□□□□□ -1.12
CD44-210ENST00000434472 IGHV4-39P01824 125 aa8.05□□□□□ -1.12
CD44-210ENST00000434472 ORM1P02763 201 aa8.05□□□□□ -1.12
CD44-210ENST00000434472 ZNF80P51504 273 aaPredicted RBP8.05□□□□□ -1.12
CD44-210ENST00000434472 SLC25A34Q6PIV7 304 aa8.05□□□□□ -1.12
CD44-210ENST00000434472 Q8TAT8 98 aa8.05□□□□□ -1.12
CD44-210ENST00000434472 CNFNQ9BYD5 112 aa8.05□□□□□ -1.12
CD44-210ENST00000434472 NPFFR1Q9GZQ6 430 aa8.05□□□□□ -1.12
CD44-210ENST00000434472 MEGF9Q9H1U4 602 aa8.05□□□□□ -1.12
CD44-210ENST00000434472 SIGLEC8Q9NYZ4 499 aa8.05□□□□□ -1.12
CD44-210ENST00000434472 ASPMQ8IZT6 3477 aa8.05□□□□□ -1.12
CD44-210ENST00000434472 ATMQ13315 3056 aa8.05□□□□□ -1.12
CD44-210ENST00000434472 ABCA1O95477 2261 aa8.04□□□□□ -1.12
CD44-210ENST00000434472 IGHV3-35A0A0C4DH35 117 aa8.04□□□□□ -1.12
CD44-210ENST00000434472 H3BUA1 57 aa8.04□□□□□ -1.12
CD44-210ENST00000434472 C19orf84I3L1E1 186 aa8.04□□□□□ -1.12
CD44-210ENST00000434472 BRI3O95415 125 aa8.04□□□□□ -1.12
CD44-210ENST00000434472 CKS2P33552 79 aa8.04□□□□□ -1.12
CD44-210ENST00000434472 C19orf54Q5BKX5 351 aa8.04□□□□□ -1.12
CD44-210ENST00000434472 TMEM78Q5T7P6 136 aa8.04□□□□□ -1.12
CD44-210ENST00000434472 IGFL4Q6B9Z1 124 aa8.04□□□□□ -1.12
CD44-210ENST00000434472 AMN1Q8IY45 258 aa8.04□□□□□ -1.12
CD44-210ENST00000434472 PPP1R14DQ9NXH3 145 aa8.04□□□□□ -1.12
CD44-210ENST00000434472 GOLT1BQ9Y3E0 138 aa8.04□□□□□ -1.12
CD44-210ENST00000434472 PRB4P10163 310 aaPredicted RBP8.03□□□□□ -1.12
CD44-210ENST00000434472 IFI27P40305 119 aaPredicted RBP8.03□□□□□ -1.12
CD44-210ENST00000434472 UQCRFS1P47985 274 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 ERCC8Q13216 396 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms