RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 PLA2G2EQ9NZK7 142 aa13.52□□□□□ -0.25
RFTN1-202ENST00000431547 A8MTW9 85 aa13.51□□□□□ -0.25
RFTN1-202ENST00000431547 ZNF705FA8MVS1 300 aaPredicted RBP13.51□□□□□ -0.25
RFTN1-202ENST00000431547 CXorf1O96002 111 aa13.51□□□□□ -0.25
RFTN1-202ENST00000431547 NUTF2P61970 127 aaKnown RBP13.51□□□□□ -0.25
RFTN1-202ENST00000431547 SSX7Q7RTT5 188 aa13.51□□□□□ -0.25
RFTN1-202ENST00000431547 OR4B1Q8NGF8 309 aa13.51□□□□□ -0.25
RFTN1-202ENST00000431547 OR8A1Q8NGG7 326 aa13.51□□□□□ -0.25
RFTN1-202ENST00000431547 SUN5Q8TC36 379 aa13.51□□□□□ -0.25
RFTN1-202ENST00000431547 PHYHIPLQ96FC7 376 aa13.51□□□□□ -0.25
RFTN1-202ENST00000431547 GIG44P09565 113 aaPredicted RBP13.5□□□□□ -0.25
RFTN1-202ENST00000431547 RANP62826 216 aaKnown RBP13.5□□□□□ -0.25
RFTN1-202ENST00000431547 ICAM4Q14773 271 aa13.5□□□□□ -0.25
RFTN1-202ENST00000431547 EIF5AL1Q6IS14 154 aaKnown RBP13.5□□□□□ -0.25
RFTN1-202ENST00000431547 EXOC3-AS1Q8N2X6 119 aa13.5□□□□□ -0.25
RFTN1-202ENST00000431547 TMED6Q8WW62 240 aa13.5□□□□□ -0.25
RFTN1-202ENST00000431547 TP53TG1Q9Y2A0 90 aa13.5□□□□□ -0.25
RFTN1-202ENST00000431547 PRAC2D3DTV9 90 aa13.49□□□□□ -0.25
RFTN1-202ENST00000431547 CA1P00915 261 aaPredicted RBP13.49□□□□□ -0.25
RFTN1-202ENST00000431547 IGKV3-20P01619 116 aa13.49□□□□□ -0.25
RFTN1-202ENST00000431547 ZNF705DP0CH99 300 aaPredicted RBP13.49□□□□□ -0.25
RFTN1-202ENST00000431547 ZNF705BP0CI00 300 aaPredicted RBP13.49□□□□□ -0.25
RFTN1-202ENST00000431547 GCHFRP30047 84 aa13.49□□□□□ -0.25
RFTN1-202ENST00000431547 CNN1P51911 297 aaKnown RBP13.49□□□□□ -0.25
RFTN1-202ENST00000431547 DPPA3Q6W0C5 159 aa13.49□□□□□ -0.25
RFTN1-202ENST00000431547 M0R3E3 92 aa13.48□□□□□ -0.25
RFTN1-202ENST00000431547 NKX2-5P52952 324 aaPredicted RBP13.48□□□□□ -0.25
RFTN1-202ENST00000431547 HIST1H1AQ02539 215 aaPredicted RBP13.48□□□□□ -0.25
RFTN1-202ENST00000431547 AMTNQ6UX39 209 aa13.48□□□□□ -0.25
RFTN1-202ENST00000431547 RNF183Q96D59 192 aa13.48□□□□□ -0.25
RFTN1-202ENST00000431547 OVOL2Q9BRP0 275 aa13.48□□□□□ -0.25
RFTN1-202ENST00000431547 Q9H3A6 140 aa13.48□□□□□ -0.25
RFTN1-202ENST00000431547 TMEM167BQ9NRX6 74 aa13.48□□□□□ -0.25
RFTN1-202ENST00000431547 U3KQK5 164 aa13.48□□□□□ -0.25
RFTN1-202ENST00000431547 DNAH9Q9NYC9 4486 aa13.48□□□□□ -0.25
RFTN1-202ENST00000431547 SPRY2O43597 315 aa13.47□□□□□ -0.25
RFTN1-202ENST00000431547 FHITP49789 147 aa13.47□□□□□ -0.25
RFTN1-202ENST00000431547 DEFB135Q30KP9 77 aa13.47□□□□□ -0.25
RFTN1-202ENST00000431547 OR10J6PQ8NGY7 276 aa13.47□□□□□ -0.25
RFTN1-202ENST00000431547 RCHY1Q96PM5 261 aa13.47□□□□□ -0.25
RFTN1-202ENST00000431547 C1QTNF4Q9BXJ3 329 aa13.47□□□□□ -0.25
RFTN1-202ENST00000431547 RETNQ9HD89 108 aa13.47□□□□□ -0.25
RFTN1-202ENST00000431547 MAP1LC3B2A6NCE7 125 aa13.46□□□□□ -0.25
RFTN1-202ENST00000431547 PRB4P10163 310 aaPredicted RBP13.46□□□□□ -0.25
RFTN1-202ENST00000431547 RAB5CP51148 216 aa13.46□□□□□ -0.25
RFTN1-202ENST00000431547 FAM213BQ8TBF2 198 aa13.46□□□□□ -0.25
RFTN1-202ENST00000431547 MBD3L1Q8WWY6 194 aa13.46□□□□□ -0.25
RFTN1-202ENST00000431547 MAP1LC3BQ9GZQ8 125 aa13.46□□□□□ -0.25
RFTN1-202ENST00000431547 OTORQ9NRC9 128 aa13.46□□□□□ -0.25
RFTN1-202ENST00000431547 CSN1S1P47710 185 aa13.45□□□□□ -0.26
RFTN1-202ENST00000431547 FAM74A1Q5RGS3 127 aa13.45□□□□□ -0.26
RFTN1-202ENST00000431547 ARL6IP6Q8N6S5 226 aa13.45□□□□□ -0.26
RFTN1-202ENST00000431547 CSNK1G2-AS1Q8NCQ2 148 aa13.45□□□□□ -0.26
RFTN1-202ENST00000431547 RXFP4Q8TDU9 374 aa13.45□□□□□ -0.26
RFTN1-202ENST00000431547 SLC35B3Q9H1N7 401 aa13.45□□□□□ -0.26
RFTN1-202ENST00000431547 PGPA6NDG6 321 aa13.44□□□□□ -0.26
RFTN1-202ENST00000431547 NPIPB6E9PJ23 425 aa13.44□□□□□ -0.26
RFTN1-202ENST00000431547 FGF8P55075 233 aaPredicted RBP13.44□□□□□ -0.26
RFTN1-202ENST00000431547 IQCF2Q8IXL9 164 aa13.44□□□□□ -0.26
RFTN1-202ENST00000431547 TMPRSS5Q9H3S3 457 aa13.44□□□□□ -0.26
RFTN1-202ENST00000431547 XCL2Q9UBD3 114 aa13.44□□□□□ -0.26
RFTN1-202ENST00000431547 AMBPP02760 352 aa13.43□□□□□ -0.26
RFTN1-202ENST00000431547 SULT1A2P50226 295 aa13.43□□□□□ -0.26
RFTN1-202ENST00000431547 FXYD7P58549 80 aa13.43□□□□□ -0.26
RFTN1-202ENST00000431547 SFT2D1Q8WV19 159 aa13.43□□□□□ -0.26
RFTN1-202ENST00000431547 LINC00477Q96M19 166 aa13.43□□□□□ -0.26
RFTN1-202ENST00000431547 PPP1R14DQ9NXH3 145 aa13.43□□□□□ -0.26
RFTN1-202ENST00000431547 BOLA1Q9Y3E2 137 aa13.43□□□□□ -0.26
RFTN1-202ENST00000431547 A0A1W2PRE2 83 aa13.42□□□□□ -0.26
RFTN1-202ENST00000431547 BOLA2-SMG1P6H3BVE0 249 aa13.42□□□□□ -0.26
RFTN1-202ENST00000431547 H2AFB1P0C5Y9 115 aa13.42□□□□□ -0.26
RFTN1-202ENST00000431547 C9orf47Q6ZRZ4 202 aa13.42□□□□□ -0.26
RFTN1-202ENST00000431547 CMTM2Q8TAZ6 248 aa13.42□□□□□ -0.26
RFTN1-202ENST00000431547 AGPAT4-IT1Q9H0P7 198 aa13.42□□□□□ -0.26
RFTN1-202ENST00000431547 RBAKDNA6NC62 111 aa13.41□□□□□ -0.26
RFTN1-202ENST00000431547 DIRC3C9JPN6 131 aa13.41□□□□□ -0.26
RFTN1-202ENST00000431547 SLC25A5P05141 298 aaKnown RBP13.41□□□□□ -0.26
RFTN1-202ENST00000431547 CT45A10P0DMU9 189 aa13.41□□□□□ -0.26
RFTN1-202ENST00000431547 SPINK13Q1W4C9 94 aa13.41□□□□□ -0.26
RFTN1-202ENST00000431547 ODF3Q96PU9 254 aa13.41□□□□□ -0.26
RFTN1-202ENST00000431547 RARRES2Q99969 163 aa13.41□□□□□ -0.26
RFTN1-202ENST00000431547 TGP01266 2768 aa13.4□□□□□ -0.26
RFTN1-202ENST00000431547 IGKV2-40A0A087WW87 121 aaPredicted RBP13.4□□□□□ -0.26
RFTN1-202ENST00000431547 M0R2Z0 102 aa13.4□□□□□ -0.26
RFTN1-202ENST00000431547 IGKV2D-40P01614 121 aaPredicted RBP13.4□□□□□ -0.26
RFTN1-202ENST00000431547 SUMO1P63165 101 aaKnown RBP13.4□□□□□ -0.26
RFTN1-202ENST00000431547 ERCC8Q13216 396 aa13.4□□□□□ -0.26
RFTN1-202ENST00000431547 OR11H2Q8NH07 326 aa13.4□□□□□ -0.26
RFTN1-202ENST00000431547 IGF2BP2-AS1Q96M15 143 aa13.4□□□□□ -0.26
RFTN1-202ENST00000431547 COL7A1Q02388 2944 aa13.39□□□□□ -0.27
RFTN1-202ENST00000431547 TRAV1-1A0A0B4J248 108 aa13.39□□□□□ -0.27
RFTN1-202ENST00000431547 ZNF705EA8MWA4 302 aaPredicted RBP13.39□□□□□ -0.27
RFTN1-202ENST00000431547 CRXO43186 299 aaPredicted RBP13.39□□□□□ -0.27
RFTN1-202ENST00000431547 TSPOP30536 169 aa13.39□□□□□ -0.27
RFTN1-202ENST00000431547 CDKN1BP46527 198 aa13.39□□□□□ -0.27
RFTN1-202ENST00000431547 C5orf17Q8NAS9 161 aa13.39□□□□□ -0.27
RFTN1-202ENST00000431547 VGLL1Q99990 258 aa13.39□□□□□ -0.27
RFTN1-202ENST00000431547 NKX6-2Q9C056 277 aaPredicted RBP13.39□□□□□ -0.27
RFTN1-202ENST00000431547 YTHDF2Q9Y5A9 579 aaKnown RBP13.39□□□□□ -0.27
RFTN1-202ENST00000431547 AGRNO00468 2067 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms