RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 RPL11P62913 178 aaKnown RBP13.77□□□□□ -0.21
HMGN1-206ENST00000431390 ZNF674Q2M3X9 581 aa13.77□□□□□ -0.21
HMGN1-206ENST00000431390 SVBPQ8N300 66 aa13.77□□□□□ -0.21
HMGN1-206ENST00000431390 SOCS3O14543 225 aa13.76□□□□□ -0.21
HMGN1-206ENST00000431390 AKR1C3P42330 323 aa13.76□□□□□ -0.21
HMGN1-206ENST00000431390 GNG5P63218 68 aa13.76□□□□□ -0.21
HMGN1-206ENST00000431390 DERL1Q9BUN8 251 aa13.76□□□□□ -0.21
HMGN1-206ENST00000431390 SIGLEC8Q9NYZ4 499 aa13.76□□□□□ -0.21
HMGN1-206ENST00000431390 MLXQ9UH92 298 aa13.76□□□□□ -0.21
HMGN1-206ENST00000431390 CMYA5Q8N3K9 4069 aa13.76□□□□□ -0.21
HMGN1-206ENST00000431390 RPL35P42766 123 aaKnown RBP13.75□□□□□ -0.21
HMGN1-206ENST00000431390 CSN1S1P47710 185 aa13.75□□□□□ -0.21
HMGN1-206ENST00000431390 CNN1P51911 297 aaKnown RBP13.75□□□□□ -0.21
HMGN1-206ENST00000431390 GUCA2BQ16661 112 aa13.75□□□□□ -0.21
HMGN1-206ENST00000431390 MRPL53Q96EL3 112 aaKnown RBP13.75□□□□□ -0.21
HMGN1-206ENST00000431390 C16orf92Q96LL3 132 aa13.75□□□□□ -0.21
HMGN1-206ENST00000431390 NAT8Q9UHE5 227 aa13.75□□□□□ -0.21
HMGN1-206ENST00000431390 TRAV8-2A0A0B4J237 113 aa13.75□□□□□ -0.21
HMGN1-206ENST00000431390 SERTM2A0A1B0GWG4 89 aa13.75□□□□□ -0.21
HMGN1-206ENST00000431390 TAS2R60P59551 318 aa13.75□□□□□ -0.21
HMGN1-206ENST00000431390 C9JCJ5 164 aa13.74□□□□□ -0.21
HMGN1-206ENST00000431390 DIRC3C9JPN6 131 aa13.74□□□□□ -0.21
HMGN1-206ENST00000431390 M0R3E3 92 aa13.74□□□□□ -0.21
HMGN1-206ENST00000431390 ISLRO14498 428 aa13.74□□□□□ -0.21
HMGN1-206ENST00000431390 S100A9P06702 114 aaKnown RBP13.74□□□□□ -0.21
HMGN1-206ENST00000431390 PNRC1Q12796 327 aaPredicted RBP13.74□□□□□ -0.21
HMGN1-206ENST00000431390 TMEM241Q24JQ0 296 aa13.74□□□□□ -0.21
HMGN1-206ENST00000431390 TVP23CQ96ET8 276 aa13.74□□□□□ -0.21
HMGN1-206ENST00000431390 SDF2L1Q9HCN8 221 aa13.74□□□□□ -0.21
HMGN1-206ENST00000431390 RPH3ALQ9UNE2 315 aa13.74□□□□□ -0.21
HMGN1-206ENST00000431390 KLF12Q9Y4X4 402 aa13.74□□□□□ -0.21
HMGN1-206ENST00000431390 K7EQM0 130 aa13.73□□□□□ -0.21
HMGN1-206ENST00000431390 SNAPINO95295 136 aa13.73□□□□□ -0.21
HMGN1-206ENST00000431390 PF4P02776 101 aa13.73□□□□□ -0.21
HMGN1-206ENST00000431390 TMEM183BQ1AE95 376 aa13.73□□□□□ -0.21
HMGN1-206ENST00000431390 IGFL4Q6B9Z1 124 aa13.73□□□□□ -0.21
HMGN1-206ENST00000431390 DYNLRB2Q8TF09 96 aa13.73□□□□□ -0.21
HMGN1-206ENST00000431390 DCANP1Q8TF63 244 aa13.73□□□□□ -0.21
HMGN1-206ENST00000431390 FMC1Q96HJ9 113 aa13.73□□□□□ -0.21
HMGN1-206ENST00000431390 MS4A6AQ9H2W1 248 aa13.73□□□□□ -0.21
HMGN1-206ENST00000431390 PRKDCP78527 4128 aaKnown RBP13.72□□□□□ -0.21
HMGN1-206ENST00000431390 HLA-DMBP28068 263 aa13.72□□□□□ -0.21
HMGN1-206ENST00000431390 UBE2G1P62253 170 aa13.72□□□□□ -0.21
HMGN1-206ENST00000431390 PSG3Q16557 428 aa13.72□□□□□ -0.21
HMGN1-206ENST00000431390 LCN12Q6JVE5 192 aa13.72□□□□□ -0.21
HMGN1-206ENST00000431390 GOLT1AQ6ZVE7 132 aa13.72□□□□□ -0.21
HMGN1-206ENST00000431390 LY96Q9Y6Y9 160 aa13.72□□□□□ -0.21
HMGN1-206ENST00000431390 TRBV20OR9-2A0A075B6H5 130 aa13.71□□□□□ -0.21
HMGN1-206ENST00000431390 IGKV3-7A0A075B6H7 116 aa13.71□□□□□ -0.21
HMGN1-206ENST00000431390 ID1P41134 155 aa13.71□□□□□ -0.21
HMGN1-206ENST00000431390 PAFAH1B2P68402 229 aa13.71□□□□□ -0.21
HMGN1-206ENST00000431390 DEFB114Q30KQ6 69 aa13.71□□□□□ -0.21
HMGN1-206ENST00000431390 RNF182Q8N6D2 247 aa13.71□□□□□ -0.21
HMGN1-206ENST00000431390 TMEM75Q8N9X5 138 aa13.71□□□□□ -0.21
HMGN1-206ENST00000431390 CLRN3Q8NCR9 226 aa13.71□□□□□ -0.21
HMGN1-206ENST00000431390 LINC00479Q96M42 142 aa13.71□□□□□ -0.21
HMGN1-206ENST00000431390 SELENOKQ9Y6D0 94 aa13.71□□□□□ -0.21
HMGN1-206ENST00000431390 TRAV2A0A0B4J234 112 aa13.71□□□□□ -0.22
HMGN1-206ENST00000431390 TRBV6-1A0A0K0K1D8 114 aa13.71□□□□□ -0.22
HMGN1-206ENST00000431390 GNG4P50150 75 aa13.71□□□□□ -0.22
HMGN1-206ENST00000431390 CENPWQ5EE01 88 aa13.71□□□□□ -0.22
HMGN1-206ENST00000431390 LINC00482Q8N8I6 264 aa13.71□□□□□ -0.22
HMGN1-206ENST00000431390 IGF2BP2-AS1Q96M15 143 aa13.71□□□□□ -0.22
HMGN1-206ENST00000431390 VWFP04275 2813 aa13.7□□□□□ -0.22
HMGN1-206ENST00000431390 TRAV34A0A0B4J273 112 aa13.7□□□□□ -0.22
HMGN1-206ENST00000431390 RBAKDNA6NC62 111 aa13.7□□□□□ -0.22
HMGN1-206ENST00000431390 FBLL1A6NHQ2 334 aaKnown RBP13.7□□□□□ -0.22
HMGN1-206ENST00000431390 K7EQG2 157 aa13.7□□□□□ -0.22
HMGN1-206ENST00000431390 DNASE2O00115 360 aaPredicted RBP13.7□□□□□ -0.22
HMGN1-206ENST00000431390 TSPAN4O14817 238 aa13.7□□□□□ -0.22
HMGN1-206ENST00000431390 RBPMS2Q6ZRY4 209 aaKnown RBP13.7□□□□□ -0.22
HMGN1-206ENST00000431390 GBGT1Q8N5D6 347 aa13.7□□□□□ -0.22
HMGN1-206ENST00000431390 TRAV25A0A0B4J276 109 aa13.69□□□□□ -0.22
HMGN1-206ENST00000431390 ZNF705FA8MVS1 300 aaPredicted RBP13.69□□□□□ -0.22
HMGN1-206ENST00000431390 M0R036 132 aa13.69□□□□□ -0.22
HMGN1-206ENST00000431390 RPL23P62829 140 aaKnown RBP13.69□□□□□ -0.22
HMGN1-206ENST00000431390 LINC01551Q86U37 167 aa13.69□□□□□ -0.22
HMGN1-206ENST00000431390 SMIM12Q96EX1 92 aa13.69□□□□□ -0.22
HMGN1-206ENST00000431390 WNK1Q9H4A3 2382 aa13.69□□□□□ -0.22
HMGN1-206ENST00000431390 B4DEV8 164 aa13.68□□□□□ -0.22
HMGN1-206ENST00000431390 IGLV2-11P01706 119 aa13.68□□□□□ -0.22
HMGN1-206ENST00000431390 RHEBQ15382 184 aa13.68□□□□□ -0.22
HMGN1-206ENST00000431390 TMEM61Q8N0U2 210 aa13.68□□□□□ -0.22
HMGN1-206ENST00000431390 C20orf173Q96LM9 149 aa13.68□□□□□ -0.22
HMGN1-206ENST00000431390 LTAP01374 205 aa13.67□□□□□ -0.22
HMGN1-206ENST00000431390 FLI1Q01543 452 aaPredicted RBP13.67□□□□□ -0.22
HMGN1-206ENST00000431390 ADIRFQ15847 76 aa13.67□□□□□ -0.22
HMGN1-206ENST00000431390 Q86TA4 180 aa13.67□□□□□ -0.22
HMGN1-206ENST00000431390 BAGE2Q86Y30 109 aa13.67□□□□□ -0.22
HMGN1-206ENST00000431390 WFDC3Q8IUB2 231 aa13.67□□□□□ -0.22
HMGN1-206ENST00000431390 ZNF738Q8NE65 137 aa13.67□□□□□ -0.22
HMGN1-206ENST00000431390 OCC1Q8TAD7 63 aa13.67□□□□□ -0.22
HMGN1-206ENST00000431390 IGKV2-40A0A087WW87 121 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-206ENST00000431390 PGPEP1LA6NFU8 196 aa13.66□□□□□ -0.22
HMGN1-206ENST00000431390 IGKV2D-40P01614 121 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-206ENST00000431390 SNRPD3P62318 126 aaKnown RBP13.66□□□□□ -0.22
HMGN1-206ENST00000431390 CD300EQ496F6 205 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-206ENST00000431390 ATRAIDQ6UW56 229 aa13.66□□□□□ -0.22
HMGN1-206ENST00000431390 PSG8Q9UQ74 426 aa13.66□□□□□ -0.22
HMGN1-206ENST00000431390 TRAV8-1A0A0A6YYK1 113 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms