RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 A6NJ64 397 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 ZNF705EA8MWA4 302 aaPredicted RBP2.36□□□□□ -2.03
PTPN4-204ENST00000431283 C16orf90A8MZG2 172 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 CORTO00230 105 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 PGLYRP1O75594 196 aaPredicted RBP2.36□□□□□ -2.03
PTPN4-204ENST00000431283 MT-CO2P00403 227 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 ZNF688P0C7X2 276 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 F2RP25116 425 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 GNRHRP30968 328 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 FGF9P31371 208 aaPredicted RBP2.36□□□□□ -2.03
PTPN4-204ENST00000431283 G6PCP35575 357 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 LPAR6P43657 344 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 C12orf74Q32Q52 190 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 ACTL10Q5JWF8 245 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 OGFRL1Q5TC84 451 aaPredicted RBP2.36□□□□□ -2.03
PTPN4-204ENST00000431283 C22orf42Q6IC83 251 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 LPCAT3Q6P1A2 487 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 SLC25A34Q6PIV7 304 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 TOMM20LQ6UXN7 152 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 ZNF818PQ6ZRF7 136 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 H2BFWTQ7Z2G1 175 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 STXBP6Q8NFX7 210 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 TMEM230Q96A57 120 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 PDCD10Q9BUL8 212 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 VSIRQ9H7M9 311 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 ENY2Q9NPA8 101 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 IFT46Q9NQC8 304 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 DIABLOQ9NR28 239 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 BLOC1S6Q9UL45 172 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 PUS1Q9Y606 427 aaKnown RBP eCLIP2.36□□□□□ -2.03
PTPN4-204ENST00000431283 DNAH17Q9UFH2 4485 aa2.36□□□□□ -2.03
PTPN4-204ENST00000431283 DYNC1H1Q14204 4646 aaKnown RBP2.35□□□□□ -2.03
PTPN4-204ENST00000431283 TRAV30A0A087WSZ9 112 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 KNCNA6PVL3 124 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 I3L2K1 104 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 GPR31O00270 319 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 SSX5O60225 188 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 ATG12O94817 140 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 CD74P04233 296 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 PTHLHP12272 177 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 HTN3P15516 51 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 P2RY1P47900 373 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 EMP1P54849 157 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 TAS2R46P59540 309 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 TSPAN5P62079 268 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 PRCDQ00LT1 54 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 DHRS2Q13268 280 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 PSMG4Q5JS54 123 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 ZNF767PQ75MW2 155 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 SLC35G3Q8N808 338 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 OR5H2Q8NGV7 314 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 Q8WTZ3 238 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 LINC00477Q96M19 166 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 NIPSNAP3BQ9BS92 247 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 ZNF2Q9BSG1 426 aaPredicted RBP2.35□□□□□ -2.03
PTPN4-204ENST00000431283 DUSP21Q9H596 190 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 NDUFB11Q9NX14 153 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 RHBDL2Q9NX52 303 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 XCL2Q9UBD3 114 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 SSR3Q9UNL2 185 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 RRP15Q9Y3B9 282 aaKnown RBP2.35□□□□□ -2.03
PTPN4-204ENST00000431283 RFNGQ9Y644 331 aa2.35□□□□□ -2.03
PTPN4-204ENST00000431283 DNAH5Q8TE73 4624 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 H3BTX0 84 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 GSTZ1O43708 216 aaPredicted RBP2.34□□□□□ -2.03
PTPN4-204ENST00000431283 TMEM50AO95807 157 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 HBE1P02100 147 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 PMP2P02689 132 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 IGKV4-1P06312 121 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 CRYBB3P26998 211 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 PSMB9P28065 219 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 NUP62P37198 522 aaPredicted RBP2.34□□□□□ -2.03
PTPN4-204ENST00000431283 OPRK1P41145 380 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 HSPA13P48723 471 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 HSPE1P61604 102 aaKnown RBP2.34□□□□□ -2.03
PTPN4-204ENST00000431283 IDNKQ5T6J7 187 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 SFXN4Q6P4A7 337 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 ARRDC1Q8N5I2 433 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 FAM24BQ8N5W8 94 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 C15orf53Q8NAA6 179 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 OR4X1Q8NH49 305 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 LGALS14Q8TCE9 139 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 DCANP1Q8TF63 244 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 FCGR1BQ92637 280 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 S100A16Q96FQ6 103 aaKnown RBP2.34□□□□□ -2.03
PTPN4-204ENST00000431283 C7orf50Q9BRJ6 194 aaKnown RBP2.34□□□□□ -2.03
PTPN4-204ENST00000431283 VCX3BQ9H321 246 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 PPDPFQ9H3Y8 114 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 AUNIPQ9H7T9 357 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 TXNL4BQ9NX01 149 aaKnown RBP2.34□□□□□ -2.03
PTPN4-204ENST00000431283 GOLT1BQ9Y3E0 138 aa2.34□□□□□ -2.03
PTPN4-204ENST00000431283 MUC4Q99102 2169 aa2.34□□□□□ -2.04
PTPN4-204ENST00000431283 PKD1P98161 4303 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 LOC100131303A0A0U1RQF7 123 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 SMIM31A0A1B0GVY4 71 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 MEIS3P1A6NDR6 274 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 ZNF705FA8MVS1 300 aaPredicted RBP2.33□□□□□ -2.04
PTPN4-204ENST00000431283 INS-IGF2F8WCM5 200 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 H3BMM0 161 aa2.33□□□□□ -2.04
PTPN4-204ENST00000431283 GIPP09681 153 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms