RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 FHITP49789 147 aa13.35□□□□□ -0.27
CDC42EP1-203ENST00000430687 RANP62826 216 aaKnown RBP13.35□□□□□ -0.27
CDC42EP1-203ENST00000430687 RPUSD4Q96CM3 377 aaKnown RBP13.35□□□□□ -0.27
CDC42EP1-203ENST00000430687 MAP1LC3BQ9GZQ8 125 aa13.35□□□□□ -0.27
CDC42EP1-203ENST00000430687 BOLA1Q9Y3E2 137 aa13.35□□□□□ -0.27
CDC42EP1-203ENST00000430687 ICAM4Q14773 271 aa13.34□□□□□ -0.27
CDC42EP1-203ENST00000430687 HAGHQ16775 308 aa13.34□□□□□ -0.27
CDC42EP1-203ENST00000430687 FAM74A1Q5RGS3 127 aa13.34□□□□□ -0.27
CDC42EP1-203ENST00000430687 GDF5OSQ5U4N7 250 aa13.34□□□□□ -0.27
CDC42EP1-203ENST00000430687 MORN3Q6PF18 240 aaPredicted RBP13.34□□□□□ -0.27
CDC42EP1-203ENST00000430687 ARL6IP6Q8N6S5 226 aa13.34□□□□□ -0.27
CDC42EP1-203ENST00000430687 Q9H3A6 140 aa13.34□□□□□ -0.27
CDC42EP1-203ENST00000430687 A8MTW9 85 aa13.33□□□□□ -0.28
CDC42EP1-203ENST00000430687 BOLA2-SMG1P6H3BVE0 249 aa13.33□□□□□ -0.28
CDC42EP1-203ENST00000430687 H2AFB1P0C5Y9 115 aa13.33□□□□□ -0.28
CDC42EP1-203ENST00000430687 NHLRC4P0CG21 123 aaPredicted RBP13.33□□□□□ -0.28
CDC42EP1-203ENST00000430687 RPL35AP18077 110 aaKnown RBP13.33□□□□□ -0.28
CDC42EP1-203ENST00000430687 NUTF2P61970 127 aaKnown RBP13.33□□□□□ -0.28
CDC42EP1-203ENST00000430687 SBSPONQ8IVN8 264 aa13.33□□□□□ -0.28
CDC42EP1-203ENST00000430687 EXOC3-AS1Q8N2X6 119 aa13.33□□□□□ -0.28
CDC42EP1-203ENST00000430687 OR8A1Q8NGG7 326 aa13.33□□□□□ -0.28
CDC42EP1-203ENST00000430687 SFT2D1Q8WV19 159 aa13.33□□□□□ -0.28
CDC42EP1-203ENST00000430687 CSTL1Q9H114 145 aa13.33□□□□□ -0.28
CDC42EP1-203ENST00000430687 OTORQ9NRC9 128 aa13.33□□□□□ -0.28
CDC42EP1-203ENST00000430687 ZNF705FA8MVS1 300 aaPredicted RBP13.32□□□□□ -0.28
CDC42EP1-203ENST00000430687 F6UB75 175 aa13.32□□□□□ -0.28
CDC42EP1-203ENST00000430687 DEFB1P60022 68 aa13.32□□□□□ -0.28
CDC42EP1-203ENST00000430687 RXFP4Q8TDU9 374 aa13.32□□□□□ -0.28
CDC42EP1-203ENST00000430687 TRAV1-1A0A0B4J248 108 aa13.31□□□□□ -0.28
CDC42EP1-203ENST00000430687 A0A1W2PRE2 83 aa13.31□□□□□ -0.28
CDC42EP1-203ENST00000430687 TEX46H3BTG2 121 aa13.31□□□□□ -0.28
CDC42EP1-203ENST00000430687 M0R3E3 92 aa13.31□□□□□ -0.28
CDC42EP1-203ENST00000430687 CSN1S1P47710 185 aa13.31□□□□□ -0.28
CDC42EP1-203ENST00000430687 CNN1P51911 297 aaKnown RBP13.31□□□□□ -0.28
CDC42EP1-203ENST00000430687 FGF8P55075 233 aaPredicted RBP13.31□□□□□ -0.28
CDC42EP1-203ENST00000430687 IQCF2Q8IXL9 164 aa13.31□□□□□ -0.28
CDC42EP1-203ENST00000430687 OR4B1Q8NGF8 309 aa13.31□□□□□ -0.28
CDC42EP1-203ENST00000430687 OR10J6PQ8NGY7 276 aa13.31□□□□□ -0.28
CDC42EP1-203ENST00000430687 PGPA6NDG6 321 aa13.3□□□□□ -0.28
CDC42EP1-203ENST00000430687 Q6ZWC4 215 aa13.3□□□□□ -0.28
CDC42EP1-203ENST00000430687 TM2D3Q9BRN9 247 aa13.3□□□□□ -0.28
CDC42EP1-203ENST00000430687 NKX6-2Q9C056 277 aaPredicted RBP13.3□□□□□ -0.28
CDC42EP1-203ENST00000430687 PRAC2D3DTV9 90 aa13.29□□□□□ -0.28
CDC42EP1-203ENST00000430687 PPT1P50897 306 aa13.29□□□□□ -0.28
CDC42EP1-203ENST00000430687 HIST1H1AQ02539 215 aaPredicted RBP13.29□□□□□ -0.28
CDC42EP1-203ENST00000430687 ALKAL2Q6UX46 152 aa13.29□□□□□ -0.28
CDC42EP1-203ENST00000430687 CMTM2Q8TAZ6 248 aa13.29□□□□□ -0.28
CDC42EP1-203ENST00000430687 ASCL2Q99929 193 aa13.29□□□□□ -0.28
CDC42EP1-203ENST00000430687 C1QTNF4Q9BXJ3 329 aa13.29□□□□□ -0.28
CDC42EP1-203ENST00000430687 TMPRSS5Q9H3S3 457 aa13.29□□□□□ -0.28
CDC42EP1-203ENST00000430687 ARL2-SNX15V9GYD0 113 aa13.29□□□□□ -0.28
CDC42EP1-203ENST00000430687 RBAKDNA6NC62 111 aa13.28□□□□□ -0.28
CDC42EP1-203ENST00000430687 NPIPB6E9PJ23 425 aa13.28□□□□□ -0.28
CDC42EP1-203ENST00000430687 HBE1P02100 147 aa13.28□□□□□ -0.28
CDC42EP1-203ENST00000430687 ZNF705DP0CH99 300 aaPredicted RBP13.28□□□□□ -0.28
CDC42EP1-203ENST00000430687 ZNF705BP0CI00 300 aaPredicted RBP13.28□□□□□ -0.28
CDC42EP1-203ENST00000430687 SPATA25Q9BR10 227 aa13.28□□□□□ -0.28
CDC42EP1-203ENST00000430687 ZMAT4Q9H898 229 aa13.28□□□□□ -0.28
CDC42EP1-203ENST00000430687 TP53TG1Q9Y2A0 90 aa13.28□□□□□ -0.28
CDC42EP1-203ENST00000430687 ZNF705EA8MWA4 302 aaPredicted RBP13.27□□□□□ -0.29
CDC42EP1-203ENST00000430687 CA1P00915 261 aaPredicted RBP13.27□□□□□ -0.29
CDC42EP1-203ENST00000430687 IGKV3-20P01619 116 aa13.27□□□□□ -0.29
CDC42EP1-203ENST00000430687 AMBPP02760 352 aa13.27□□□□□ -0.29
CDC42EP1-203ENST00000430687 SLC25A5P05141 298 aaKnown RBP13.27□□□□□ -0.29
CDC42EP1-203ENST00000430687 AMTNQ6UX39 209 aa13.27□□□□□ -0.29
CDC42EP1-203ENST00000430687 C9orf47Q6ZRZ4 202 aa13.27□□□□□ -0.29
CDC42EP1-203ENST00000430687 C5orf17Q8NAS9 161 aa13.27□□□□□ -0.29
CDC42EP1-203ENST00000430687 LINC00477Q96M19 166 aa13.27□□□□□ -0.29
CDC42EP1-203ENST00000430687 SERTM2A0A1B0GWG4 89 aa13.26□□□□□ -0.29
CDC42EP1-203ENST00000430687 DIRC3C9JPN6 131 aa13.26□□□□□ -0.29
CDC42EP1-203ENST00000430687 GIG44P09565 113 aaPredicted RBP13.26□□□□□ -0.29
CDC42EP1-203ENST00000430687 SUMO1P63165 101 aaKnown RBP13.26□□□□□ -0.29
CDC42EP1-203ENST00000430687 BLOC1S1P78537 153 aa13.26□□□□□ -0.29
CDC42EP1-203ENST00000430687 ODF3Q96PU9 254 aa13.26□□□□□ -0.29
CDC42EP1-203ENST00000430687 PPP1R14DQ9NXH3 145 aa13.26□□□□□ -0.29
CDC42EP1-203ENST00000430687 FAM74A7A6NL05 159 aa13.25□□□□□ -0.29
CDC42EP1-203ENST00000430687 GGTLC3B5MD39 225 aa13.25□□□□□ -0.29
CDC42EP1-203ENST00000430687 PMS2P11Q13670 270 aa13.25□□□□□ -0.29
CDC42EP1-203ENST00000430687 TEX261Q6UWH6 196 aa13.25□□□□□ -0.29
CDC42EP1-203ENST00000430687 YTHDF2Q9Y5A9 579 aaKnown RBP13.25□□□□□ -0.29
CDC42EP1-203ENST00000430687 UBE2G2P60604 165 aa13.24□□□□□ -0.29
CDC42EP1-203ENST00000430687 TMEM78Q5T7P6 136 aa13.24□□□□□ -0.29
CDC42EP1-203ENST00000430687 RNF183Q96D59 192 aa13.24□□□□□ -0.29
CDC42EP1-203ENST00000430687 TCEAL7Q9BRU2 100 aa13.24□□□□□ -0.29
CDC42EP1-203ENST00000430687 AGPAT4-IT1Q9H0P7 198 aa13.24□□□□□ -0.29
CDC42EP1-203ENST00000430687 SLC35B3Q9H1N7 401 aa13.24□□□□□ -0.29
CDC42EP1-203ENST00000430687 EPDR1Q9UM22 224 aa13.24□□□□□ -0.29
CDC42EP1-203ENST00000430687 IGKV2-40A0A087WW87 121 aaPredicted RBP13.23□□□□□ -0.29
CDC42EP1-203ENST00000430687 TRBV7-9A0A0J9YWB2 115 aa13.23□□□□□ -0.29
CDC42EP1-203ENST00000430687 SPRY2O43597 315 aa13.23□□□□□ -0.29
CDC42EP1-203ENST00000430687 IGKV2D-40P01614 121 aaPredicted RBP13.23□□□□□ -0.29
CDC42EP1-203ENST00000430687 TSPOP30536 169 aa13.23□□□□□ -0.29
CDC42EP1-203ENST00000430687 CSNK1G2-AS1Q8NCQ2 148 aa13.23□□□□□ -0.29
CDC42EP1-203ENST00000430687 RCHY1Q96PM5 261 aa13.23□□□□□ -0.29
CDC42EP1-203ENST00000430687 MANBALQ9NQG1 85 aa13.23□□□□□ -0.29
CDC42EP1-203ENST00000430687 A0A1B0GV50 99 aa13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 K7EQM0 130 aa13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 PAGE4O60829 102 aa13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 IFNA7P01567 189 aa13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 TCRAP04437 139 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms