RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ZNF331Q9NQX6 463 aaPredicted RBP12.34□□□□□ -0.43
UBE3D-204ENST00000430071 NDUFB4O95168 129 aa12.33□□□□□ -0.44
UBE3D-204ENST00000430071 TPT1P13693 172 aaKnown RBP12.33□□□□□ -0.44
UBE3D-204ENST00000430071 TAS2R45P59539 299 aa12.33□□□□□ -0.44
UBE3D-204ENST00000430071 EIF5AP63241 154 aaKnown RBP12.33□□□□□ -0.44
UBE3D-204ENST00000430071 ZNF726P1Q15940 193 aa12.33□□□□□ -0.44
UBE3D-204ENST00000430071 KHDC3LQ587J8 217 aa12.33□□□□□ -0.44
UBE3D-204ENST00000430071 OR11H2Q8NH07 326 aa12.33□□□□□ -0.44
UBE3D-204ENST00000430071 RNF141Q8WVD5 230 aa12.33□□□□□ -0.44
UBE3D-204ENST00000430071 TMED6Q8WW62 240 aa12.33□□□□□ -0.44
UBE3D-204ENST00000430071 RARRES2Q99969 163 aa12.33□□□□□ -0.44
UBE3D-204ENST00000430071 NBEAP1P0C6P0 100 aa12.32□□□□□ -0.44
UBE3D-204ENST00000430071 ACTL10Q5JWF8 245 aa12.32□□□□□ -0.44
UBE3D-204ENST00000430071 AKR1C8PQ5T2L2 129 aa12.32□□□□□ -0.44
UBE3D-204ENST00000430071 GDF5OSQ5U4N7 250 aa12.32□□□□□ -0.44
UBE3D-204ENST00000430071 TRPT1Q86TN4 253 aaKnown RBP12.32□□□□□ -0.44
UBE3D-204ENST00000430071 BLNKQ8WV28 456 aa12.32□□□□□ -0.44
UBE3D-204ENST00000430071 SLC50A1Q9BRV3 221 aa12.32□□□□□ -0.44
UBE3D-204ENST00000430071 ACTR3CQ9C0K3 210 aaPredicted RBP12.32□□□□□ -0.44
UBE3D-204ENST00000430071 KMT2AQ03164 3969 aa12.32□□□□□ -0.44
UBE3D-204ENST00000430071 F6UB75 175 aa12.31□□□□□ -0.44
UBE3D-204ENST00000430071 ZNF253O75346 499 aa12.31□□□□□ -0.44
UBE3D-204ENST00000430071 STAG3L2P0CL84 134 aa12.31□□□□□ -0.44
UBE3D-204ENST00000430071 STAG3L3P0CL85 134 aa12.31□□□□□ -0.44
UBE3D-204ENST00000430071 ARL14EPLP0DKL9 152 aa12.31□□□□□ -0.44
UBE3D-204ENST00000430071 PRB4P10163 310 aaPredicted RBP12.31□□□□□ -0.44
UBE3D-204ENST00000430071 C4BPBP20851 252 aa12.31□□□□□ -0.44
UBE3D-204ENST00000430071 UBE2L3P68036 154 aaKnown RBP12.31□□□□□ -0.44
UBE3D-204ENST00000430071 PSG3Q16557 428 aa12.31□□□□□ -0.44
UBE3D-204ENST00000430071 SLC51BQ86UW2 128 aa12.31□□□□□ -0.44
UBE3D-204ENST00000430071 STHQ8IWL8 128 aa12.31□□□□□ -0.44
UBE3D-204ENST00000430071 BOLA1Q9Y3E2 137 aa12.31□□□□□ -0.44
UBE3D-204ENST00000430071 FHITP49789 147 aa12.3□□□□□ -0.44
UBE3D-204ENST00000430071 NANOS2P60321 138 aaKnown RBP12.3□□□□□ -0.44
UBE3D-204ENST00000430071 CEMP1Q6PRD7 247 aaPredicted RBP12.3□□□□□ -0.44
UBE3D-204ENST00000430071 PHYHIPLQ96FC7 376 aa12.3□□□□□ -0.44
UBE3D-204ENST00000430071 SAV1Q9H4B6 383 aaPredicted RBP12.3□□□□□ -0.44
UBE3D-204ENST00000430071 CTXND1A0A1B0GTU2 59 aa12.3□□□□□ -0.44
UBE3D-204ENST00000430071 H3BMM0 161 aa12.3□□□□□ -0.44
UBE3D-204ENST00000430071 PDE6HQ13956 83 aa12.3□□□□□ -0.44
UBE3D-204ENST00000430071 PQLC2Q6ZP29 291 aa12.3□□□□□ -0.44
UBE3D-204ENST00000430071 FOXI2Q6ZQN5 318 aa12.3□□□□□ -0.44
UBE3D-204ENST00000430071 ZNF738Q8NE65 137 aa12.3□□□□□ -0.44
UBE3D-204ENST00000430071 LINC00476Q8WZB0 136 aa12.3□□□□□ -0.44
UBE3D-204ENST00000430071 CLEC5AQ9NY25 188 aa12.3□□□□□ -0.44
UBE3D-204ENST00000430071 A0A0J9YX75 114 aa12.29□□□□□ -0.44
UBE3D-204ENST00000430071 ZNF705FA8MVS1 300 aaPredicted RBP12.29□□□□□ -0.44
UBE3D-204ENST00000430071 UMAD1C9J7I0 102 aa12.29□□□□□ -0.44
UBE3D-204ENST00000430071 BOLA2-SMG1P6H3BVE0 249 aa12.29□□□□□ -0.44
UBE3D-204ENST00000430071 HLA-DRB4P13762 266 aa12.29□□□□□ -0.44
UBE3D-204ENST00000430071 EXOC3-AS1Q8N2X6 119 aa12.29□□□□□ -0.44
UBE3D-204ENST00000430071 PHLDA1Q8WV24 401 aaPredicted RBP12.29□□□□□ -0.44
UBE3D-204ENST00000430071 HLA-DRB4X5D2U9 266 aa12.29□□□□□ -0.44
UBE3D-204ENST00000430071 PRAC2D3DTV9 90 aa12.28□□□□□ -0.44
UBE3D-204ENST00000430071 ZNF705DP0CH99 300 aaPredicted RBP12.28□□□□□ -0.44
UBE3D-204ENST00000430071 ZNF705BP0CI00 300 aaPredicted RBP12.28□□□□□ -0.44
UBE3D-204ENST00000430071 GCHFRP30047 84 aa12.28□□□□□ -0.44
UBE3D-204ENST00000430071 RPUSD4Q96CM3 377 aaKnown RBP12.28□□□□□ -0.44
UBE3D-204ENST00000430071 NUPR2A6NF83 97 aa12.27□□□□□ -0.45
UBE3D-204ENST00000430071 M0R3E3 92 aa12.27□□□□□ -0.45
UBE3D-204ENST00000430071 IGKV3-20P01619 116 aa12.27□□□□□ -0.45
UBE3D-204ENST00000430071 RBMY1A1P0DJD3 496 aaKnown RBP12.27□□□□□ -0.45
UBE3D-204ENST00000430071 RBMY1CP0DJD4 496 aa12.27□□□□□ -0.45
UBE3D-204ENST00000430071 RANP62826 216 aaKnown RBP12.27□□□□□ -0.45
UBE3D-204ENST00000430071 PSG9Q00887 426 aa12.27□□□□□ -0.45
UBE3D-204ENST00000430071 ICAM4Q14773 271 aa12.27□□□□□ -0.45
UBE3D-204ENST00000430071 RBMY1FQ15415 496 aaKnown RBP12.27□□□□□ -0.45
UBE3D-204ENST00000430071 EBLN2Q6P2I7 272 aa12.27□□□□□ -0.45
UBE3D-204ENST00000430071 Q8NAQ8 132 aa12.27□□□□□ -0.45
UBE3D-204ENST00000430071 CSNK1G2-AS1Q8NCQ2 148 aa12.27□□□□□ -0.45
UBE3D-204ENST00000430071 FAM213BQ8TBF2 198 aa12.27□□□□□ -0.45
UBE3D-204ENST00000430071 SUN5Q8TC36 379 aa12.27□□□□□ -0.45
UBE3D-204ENST00000430071 BIRC6Q9NR09 4857 aa12.27□□□□□ -0.45
UBE3D-204ENST00000430071 LY6G6CO95867 125 aa12.26□□□□□ -0.45
UBE3D-204ENST00000430071 CXorf1O96002 111 aa12.26□□□□□ -0.45
UBE3D-204ENST00000430071 FGF8P55075 233 aaPredicted RBP12.26□□□□□ -0.45
UBE3D-204ENST00000430071 EIF5AL1Q6IS14 154 aaKnown RBP12.26□□□□□ -0.45
UBE3D-204ENST00000430071 C11orf68Q9H3H3 251 aaKnown RBP12.26□□□□□ -0.45
UBE3D-204ENST00000430071 X6R8D5 127 aa12.26□□□□□ -0.45
UBE3D-204ENST00000430071 IGHV4-28A0A0C4DH34 117 aa12.25□□□□□ -0.45
UBE3D-204ENST00000430071 MAP1LC3B2A6NCE7 125 aa12.25□□□□□ -0.45
UBE3D-204ENST00000430071 A8MTW9 85 aa12.25□□□□□ -0.45
UBE3D-204ENST00000430071 OR4B1Q8NGF8 309 aa12.25□□□□□ -0.45
UBE3D-204ENST00000430071 OR8A1Q8NGG7 326 aa12.25□□□□□ -0.45
UBE3D-204ENST00000430071 MRPL53Q96EL3 112 aaKnown RBP12.25□□□□□ -0.45
UBE3D-204ENST00000430071 MAP1LC3BQ9GZQ8 125 aa12.25□□□□□ -0.45
UBE3D-204ENST00000430071 Q9H3A6 140 aa12.25□□□□□ -0.45
UBE3D-204ENST00000430071 TMPRSS5Q9H3S3 457 aa12.25□□□□□ -0.45
UBE3D-204ENST00000430071 AAMDCQ9H7C9 122 aa12.25□□□□□ -0.45
UBE3D-204ENST00000430071 CNN1P51911 297 aaKnown RBP12.24□□□□□ -0.45
UBE3D-204ENST00000430071 FAM74A1Q5RGS3 127 aa12.24□□□□□ -0.45
UBE3D-204ENST00000430071 DPPA3Q6W0C5 159 aa12.24□□□□□ -0.45
UBE3D-204ENST00000430071 IQCF2Q8IXL9 164 aa12.24□□□□□ -0.45
UBE3D-204ENST00000430071 LYPD1Q8N2G4 141 aa12.24□□□□□ -0.45
UBE3D-204ENST00000430071 C11orf45Q8TAV5 145 aa12.24□□□□□ -0.45
UBE3D-204ENST00000430071 MBD3L1Q8WWY6 194 aa12.24□□□□□ -0.45
UBE3D-204ENST00000430071 CLUHP3Q96NS8 147 aa12.24□□□□□ -0.45
UBE3D-204ENST00000430071 PRELID1Q9Y255 219 aa12.24□□□□□ -0.45
UBE3D-204ENST00000430071 FRAS1Q86XX4 4008 aa12.24□□□□□ -0.45
UBE3D-204ENST00000430071 SULT1A2P50226 295 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms