RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 TIMD4Q96H15 378 aa8.99□□□□□ -0.97
LINC01238-203ENST00000429456 C21orf62Q9NYP8 219 aa8.99□□□□□ -0.97
LINC01238-203ENST00000429456 TMEM213A2RRL7 107 aa8.98□□□□□ -0.97
LINC01238-203ENST00000429456 NUDT3O95989 172 aa8.98□□□□□ -0.97
LINC01238-203ENST00000429456 FAM104BQ5XKR9 115 aa8.98□□□□□ -0.97
LINC01238-203ENST00000429456 PMCHL2Q9BQD1 86 aa8.98□□□□□ -0.97
LINC01238-203ENST00000429456 TIMM8BQ9Y5J9 83 aaPredicted RBP8.98□□□□□ -0.97
LINC01238-203ENST00000429456 KALRNO60229 2985 aa8.98□□□□□ -0.97
LINC01238-203ENST00000429456 A0A096LNJ9 63 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 A0A1W2PRD5 423 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 A0A1W2PRF3 423 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 A0A1W2PRM7 423 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 D6R8Y8 96 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 FAM106CPP0CH98 169 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 RPL7P18124 248 aaKnown RBP8.97□□□□□ -0.97
LINC01238-203ENST00000429456 IFI27P40305 119 aaPredicted RBP8.97□□□□□ -0.97
LINC01238-203ENST00000429456 FAM106AQ4KMX7 169 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 Q8N6K4 173 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 IGKV2-40A0A087WW87 121 aaPredicted RBP8.97□□□□□ -0.97
LINC01238-203ENST00000429456 TMSB15BA0A087X1C1 80 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 IGHV2-70DA0A0C4DH43 119 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 NCR2O95944 276 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 IGKV2D-40P01614 121 aaPredicted RBP8.97□□□□□ -0.97
LINC01238-203ENST00000429456 DYNAPQ8N1N2 210 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 PRR25Q96S07 402 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 ZFHX2Q9C0A1 2572 aaPredicted RBP8.97□□□□□ -0.97
LINC01238-203ENST00000429456 SIGLEC8Q9NYZ4 499 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 DCHS1Q96JQ0 3298 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 ABCA4P78363 2273 aa8.97□□□□□ -0.97
LINC01238-203ENST00000429456 FBLL1A6NHQ2 334 aaKnown RBP8.96□□□□□ -0.97
LINC01238-203ENST00000429456 TAX1BP3O14907 124 aa8.96□□□□□ -0.97
LINC01238-203ENST00000429456 IGHV3-23P01764 117 aa8.96□□□□□ -0.97
LINC01238-203ENST00000429456 LOXL1Q08397 574 aaPredicted RBP8.96□□□□□ -0.97
LINC01238-203ENST00000429456 FOXC1Q12948 553 aa8.96□□□□□ -0.97
LINC01238-203ENST00000429456 EBI3Q14213 229 aa8.96□□□□□ -0.97
LINC01238-203ENST00000429456 C11orf71Q6IPW1 123 aa8.96□□□□□ -0.97
LINC01238-203ENST00000429456 C12orf54Q6X4T0 127 aa8.96□□□□□ -0.97
LINC01238-203ENST00000429456 AMN1Q8IY45 258 aa8.96□□□□□ -0.97
LINC01238-203ENST00000429456 PRELID3AQ96N28 172 aa8.96□□□□□ -0.97
LINC01238-203ENST00000429456 THYN1Q9P016 225 aa8.96□□□□□ -0.97
LINC01238-203ENST00000429456 SMAD5-AS1Q9Y6J3 95 aa8.96□□□□□ -0.97
LINC01238-203ENST00000429456 NCBP2LA6PVI3 153 aaKnown RBP8.96□□□□□ -0.98
LINC01238-203ENST00000429456 CTSGP08311 255 aa8.96□□□□□ -0.98
LINC01238-203ENST00000429456 COX8AP10176 69 aa8.96□□□□□ -0.98
LINC01238-203ENST00000429456 HIST1H1AQ02539 215 aaPredicted RBP8.96□□□□□ -0.98
LINC01238-203ENST00000429456 CCDC144NLQ6NUI1 221 aa8.96□□□□□ -0.98
LINC01238-203ENST00000429456 VMO1Q7Z5L0 202 aa8.96□□□□□ -0.98
LINC01238-203ENST00000429456 ORMDL3Q8N138 153 aa8.96□□□□□ -0.98
LINC01238-203ENST00000429456 DEFB125Q8N687 156 aa8.96□□□□□ -0.98
LINC01238-203ENST00000429456 LOC389332A0A1B0GUA5 103 aa8.95□□□□□ -0.98
LINC01238-203ENST00000429456 OR2T8A6NH00 312 aa8.95□□□□□ -0.98
LINC01238-203ENST00000429456 OOSP1A8MZH6 123 aa8.95□□□□□ -0.98
LINC01238-203ENST00000429456 CCL21O00585 134 aa8.95□□□□□ -0.98
LINC01238-203ENST00000429456 IGHG4P01861 327 aa8.95□□□□□ -0.98
LINC01238-203ENST00000429456 EGR2P11161 476 aaPredicted RBP8.95□□□□□ -0.98
LINC01238-203ENST00000429456 RPS20P60866 119 aaKnown RBP8.95□□□□□ -0.98
LINC01238-203ENST00000429456 CDSNQ15517 529 aa8.95□□□□□ -0.98
LINC01238-203ENST00000429456 MRPL51Q4U2R6 128 aaKnown RBP8.95□□□□□ -0.98
LINC01238-203ENST00000429456 ANKHD1Q8IWZ3 2542 aaKnown RBP8.95□□□□□ -0.98
LINC01238-203ENST00000429456 MUC21A0A0G2JKD1 596 aa8.95□□□□□ -0.98
LINC01238-203ENST00000429456 MUC21A0A140T8X8 626 aa8.95□□□□□ -0.98
LINC01238-203ENST00000429456 ZNF80P51504 273 aaPredicted RBP8.95□□□□□ -0.98
LINC01238-203ENST00000429456 PAX8Q06710 450 aa8.95□□□□□ -0.98
LINC01238-203ENST00000429456 MUC21Q5SSG8 566 aa8.95□□□□□ -0.98
LINC01238-203ENST00000429456 SMIM15Q7Z3B0 74 aa8.95□□□□□ -0.98
LINC01238-203ENST00000429456 DPF1Q92782 380 aa8.95□□□□□ -0.98
LINC01238-203ENST00000429456 VGLL1Q99990 258 aa8.95□□□□□ -0.98
LINC01238-203ENST00000429456 RABAC1Q9UI14 185 aa8.95□□□□□ -0.98
LINC01238-203ENST00000429456 A0A087X0K7 114 aa8.94□□□□□ -0.98
LINC01238-203ENST00000429456 K7EP13 123 aa8.94□□□□□ -0.98
LINC01238-203ENST00000429456 SCGB2A1O75556 95 aa8.94□□□□□ -0.98
LINC01238-203ENST00000429456 IGLC6P0CF74 106 aa8.94□□□□□ -0.98
LINC01238-203ENST00000429456 SRSF2Q01130 221 aaKnown RBP8.94□□□□□ -0.98
LINC01238-203ENST00000429456 MINOS1Q5TGZ0 78 aa8.94□□□□□ -0.98
LINC01238-203ENST00000429456 C2orf91Q6ZV80 131 aa8.94□□□□□ -0.98
LINC01238-203ENST00000429456 ZNF575Q86XF7 245 aa8.94□□□□□ -0.98
LINC01238-203ENST00000429456 MINOS1-NBL1R4GNA1 71 aa8.94□□□□□ -0.98
LINC01238-203ENST00000429456 IGHV7-81A0A0B4J1V7 117 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 GPR183P32249 361 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 RHOGP84095 191 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 ADORA2A-AS1P86434 159 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 VAMP3Q15836 100 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 LGALS9BQ3B8N2 356 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 LGALS9CQ6DKI2 356 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 FER1L6-AS1Q8NA97 138 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 OR8A1Q8NGG7 326 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 Q8TAT8 98 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 PSMG3-AS1Q96PY0 264 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 PTPRQQ9UMZ3 2332 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 SPTBN2O15020 2390 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 CD5LO43866 347 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 HLA-DMBP28068 263 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 S100A7P31151 101 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 IGFL4Q6B9Z1 124 aa8.93□□□□□ -0.98
LINC01238-203ENST00000429456 TLN1Q9Y490 2541 aaKnown RBP8.92□□□□□ -0.98
LINC01238-203ENST00000429456 HBDP02042 147 aa8.92□□□□□ -0.98
LINC01238-203ENST00000429456 FGF6P10767 208 aa8.92□□□□□ -0.98
LINC01238-203ENST00000429456 FOXE3Q13461 319 aa8.92□□□□□ -0.98
LINC01238-203ENST00000429456 TWIST1Q15672 202 aa8.92□□□□□ -0.98
LINC01238-203ENST00000429456 Q8N9W7 124 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms