RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 PSG1P11464 419 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 HIST1H1BP16401 226 aaKnown RBP6.63□□□□□ -1.35
HDAC1-202ENST00000428704 CRYBB3P26998 211 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 UBE2L3P68036 154 aaKnown RBP6.63□□□□□ -1.35
HDAC1-202ENST00000428704 KIAA0141Q14154 515 aaPredicted RBP6.63□□□□□ -1.35
HDAC1-202ENST00000428704 C19orf54Q5BKX5 351 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 S100A7AQ86SG5 101 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 ARPC1AQ92747 370 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 ELOVL1Q9BW60 279 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 OSTCQ9NRP0 149 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 KLF12Q9Y4X4 402 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 ISLRO14498 428 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 ATP6V0E1O15342 81 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 HIST1H2BKO60814 126 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 IGHV3-48P01763 117 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 IGHG4P01861 327 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 HIST1H2BJP06899 126 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 NBEAP1P0C6P0 100 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 RD3LP0DJH9 198 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 EGR2P11161 476 aaPredicted RBP6.62□□□□□ -1.35
HDAC1-202ENST00000428704 ORM2P19652 201 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 HIST1H2BOP23527 126 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 PPIFP30405 207 aaKnown RBP6.62□□□□□ -1.35
HDAC1-202ENST00000428704 HIST1H2BBP33778 126 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 CDX1P47902 265 aaPredicted RBP6.62□□□□□ -1.35
HDAC1-202ENST00000428704 GNG4P50150 75 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 MFAP4P55083 255 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 HIST1H2BDP58876 126 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 HIST1H2BCP62807 126 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 SLC35B1P78383 322 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 FABP9Q0Z7S8 132 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 HIST2H2BEQ16778 126 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 TIGITQ495A1 244 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.62□□□□□ -1.35
HDAC1-202ENST00000428704 FAM231DQ6ZW35 169 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 KLHL30-AS1Q8NEE0 82 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 OR1B1Q8NGR6 318 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 MYOZ3Q8TDC0 251 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 VN1R17PQ8TDU5 208 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 HIST1H2BHQ93079 126 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 IGF2BP2-AS1Q96M15 143 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 ATP6V0BQ99437 205 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 HIST1H2BNQ99877 126 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 HIST1H2BMQ99879 126 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 IL36BQ9NZH7 164 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 HIGD1AQ9Y241 93 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 SMAD5-AS1Q9Y6J3 95 aa6.62□□□□□ -1.35
HDAC1-202ENST00000428704 G3V318 75 aa6.61□□□□□ -1.35
HDAC1-202ENST00000428704 K7EN84 100 aa6.61□□□□□ -1.35
HDAC1-202ENST00000428704 IGLV2-8P01709 118 aa6.61□□□□□ -1.35
HDAC1-202ENST00000428704 TRGC1P0CF51 173 aa6.61□□□□□ -1.35
HDAC1-202ENST00000428704 HIST1H1EP10412 219 aaKnown RBP6.61□□□□□ -1.35
HDAC1-202ENST00000428704 GP9P14770 177 aa6.61□□□□□ -1.35
HDAC1-202ENST00000428704 PSMB8P28062 276 aa6.61□□□□□ -1.35
HDAC1-202ENST00000428704 CRIP2P52943 208 aaPredicted RBP6.61□□□□□ -1.35
HDAC1-202ENST00000428704 FOXE3Q13461 319 aa6.61□□□□□ -1.35
HDAC1-202ENST00000428704 TMEM183BQ1AE95 376 aa6.61□□□□□ -1.35
HDAC1-202ENST00000428704 COA6Q5JTJ3 125 aaKnown RBP6.61□□□□□ -1.35
HDAC1-202ENST00000428704 LYPD1Q8N2G4 141 aa6.61□□□□□ -1.35
HDAC1-202ENST00000428704 ARL6IP6Q8N6S5 226 aa6.61□□□□□ -1.35
HDAC1-202ENST00000428704 ZNF491Q8N8L2 437 aa6.61□□□□□ -1.35
HDAC1-202ENST00000428704 FRZBQ92765 325 aa6.61□□□□□ -1.35
HDAC1-202ENST00000428704 RAX2Q96IS3 184 aa6.61□□□□□ -1.35
HDAC1-202ENST00000428704 DUX3Q96PT4 197 aa6.61□□□□□ -1.35
HDAC1-202ENST00000428704 SLC25A39Q9BZJ4 359 aaPredicted RBP6.61□□□□□ -1.35
HDAC1-202ENST00000428704 EPDR1Q9UM22 224 aa6.61□□□□□ -1.35
HDAC1-202ENST00000428704 TRBV6-1A0A0K0K1D8 114 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 PGPEP1LA6NFU8 196 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 H3BRN7 92 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 SCGB2A1O75556 95 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 BRI3O95415 125 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 ELANEP08246 267 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 APELAP0DMC3 54 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 PYYP10082 97 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 S100A7P31151 101 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 CNN1P51911 297 aaKnown RBP6.6□□□□□ -1.35
HDAC1-202ENST00000428704 DEFB136Q30KP8 78 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 COX19Q49B96 90 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 CENPWQ5EE01 88 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 ACTL10Q5JWF8 245 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 C19orf35Q6ZS72 473 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 C5orf17Q8NAS9 161 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 SHANK2-AS3Q9BTD1 123 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 CHRDL1Q9BU40 450 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 KLK15Q9H2R5 256 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 EDA2RQ9HAV5 297 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 C21orf62Q9NYP8 219 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 V9GYV3 84 aa6.6□□□□□ -1.35
HDAC1-202ENST00000428704 TRBV9A0A0B4J1U6 114 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 TRAV41A0A0B4J266 112 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 A0A1W2PPQ1 181 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 PGPA6NDG6 321 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 ZNF98A6NK75 572 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 PEX7O00628 323 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 MRPS12O15235 138 aaKnown RBP6.59□□□□□ -1.35
HDAC1-202ENST00000428704 GNG7O60262 68 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 SMIM6P0DI80 62 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 MEOX2P50222 304 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 NDUFA6P56556 154 aa6.59□□□□□ -1.35
HDAC1-202ENST00000428704 RPL19P84098 196 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms