RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 XCL2Q9UBD3 114 aa10.7□□□□□ -0.7
SGCE-204ENST00000428696 HLA-DRB4X5D2U9 266 aa10.7□□□□□ -0.7
SGCE-204ENST00000428696 A0A0J9YX75 114 aa10.69□□□□□ -0.7
SGCE-204ENST00000428696 SPRY2O43597 315 aa10.69□□□□□ -0.7
SGCE-204ENST00000428696 NDUFB4O95168 129 aa10.69□□□□□ -0.7
SGCE-204ENST00000428696 ARL14EPLP0DKL9 152 aa10.69□□□□□ -0.7
SGCE-204ENST00000428696 TPT1P13693 172 aaKnown RBP10.69□□□□□ -0.7
SGCE-204ENST00000428696 CNN1P51911 297 aaKnown RBP10.69□□□□□ -0.7
SGCE-204ENST00000428696 OR10J6PQ8NGY7 276 aa10.69□□□□□ -0.7
SGCE-204ENST00000428696 PRAC2D3DTV9 90 aa10.68□□□□□ -0.7
SGCE-204ENST00000428696 DUSP14O95147 198 aaKnown RBP10.68□□□□□ -0.7
SGCE-204ENST00000428696 C4BPBP20851 252 aa10.68□□□□□ -0.7
SGCE-204ENST00000428696 NKX2-5P52952 324 aaPredicted RBP10.68□□□□□ -0.7
SGCE-204ENST00000428696 MORN3Q6PF18 240 aaPredicted RBP10.68□□□□□ -0.7
SGCE-204ENST00000428696 PQLC2Q6ZP29 291 aa10.68□□□□□ -0.7
SGCE-204ENST00000428696 Q6ZWC4 215 aa10.68□□□□□ -0.7
SGCE-204ENST00000428696 BAP18Q8IXM2 172 aa10.68□□□□□ -0.7
SGCE-204ENST00000428696 OR8A1Q8NGG7 326 aa10.68□□□□□ -0.7
SGCE-204ENST00000428696 ZNF503Q96F45 646 aa10.68□□□□□ -0.7
SGCE-204ENST00000428696 PHYHIPLQ96FC7 376 aa10.68□□□□□ -0.7
SGCE-204ENST00000428696 SLC35B3Q9H1N7 401 aa10.68□□□□□ -0.7
SGCE-204ENST00000428696 M0R3E3 92 aa10.67□□□□□ -0.7
SGCE-204ENST00000428696 PDE6HQ13956 83 aa10.67□□□□□ -0.7
SGCE-204ENST00000428696 FAM213BQ8TBF2 198 aa10.67□□□□□ -0.7
SGCE-204ENST00000428696 TMED6Q8WW62 240 aa10.67□□□□□ -0.7
SGCE-204ENST00000428696 OVOL2Q9BRP0 275 aa10.67□□□□□ -0.7
SGCE-204ENST00000428696 RPH3ALQ9UNE2 315 aa10.67□□□□□ -0.7
SGCE-204ENST00000428696 AGRNO00468 2067 aa10.67□□□□□ -0.7
SGCE-204ENST00000428696 IGHV3OR16-12A0A075B7B8 117 aa10.67□□□□□ -0.7
SGCE-204ENST00000428696 A0A1B0GV50 99 aa10.67□□□□□ -0.7
SGCE-204ENST00000428696 CXorf1O96002 111 aa10.67□□□□□ -0.7
SGCE-204ENST00000428696 CSN1S1P47710 185 aa10.67□□□□□ -0.7
SGCE-204ENST00000428696 FGF8P55075 233 aaPredicted RBP10.67□□□□□ -0.7
SGCE-204ENST00000428696 Q9H3A6 140 aa10.67□□□□□ -0.7
SGCE-204ENST00000428696 DNAH9Q9NYC9 4486 aa10.66□□□□□ -0.7
SGCE-204ENST00000428696 COL7A1Q02388 2944 aa10.66□□□□□ -0.7
SGCE-204ENST00000428696 PGPA6NDG6 321 aa10.66□□□□□ -0.7
SGCE-204ENST00000428696 ZNF253O75346 499 aa10.66□□□□□ -0.7
SGCE-204ENST00000428696 SEC11BP0C7V7 166 aa10.66□□□□□ -0.7
SGCE-204ENST00000428696 STAG3L2P0CL84 134 aa10.66□□□□□ -0.7
SGCE-204ENST00000428696 STAG3L3P0CL85 134 aa10.66□□□□□ -0.7
SGCE-204ENST00000428696 GCHFRP30047 84 aa10.66□□□□□ -0.7
SGCE-204ENST00000428696 FHITP49789 147 aa10.66□□□□□ -0.7
SGCE-204ENST00000428696 SSX7Q7RTT5 188 aa10.66□□□□□ -0.7
SGCE-204ENST00000428696 C9orf62Q8N4C0 152 aa10.66□□□□□ -0.7
SGCE-204ENST00000428696 OR11H2Q8NH07 326 aa10.66□□□□□ -0.7
SGCE-204ENST00000428696 CMTM2Q8TAZ6 248 aa10.66□□□□□ -0.7
SGCE-204ENST00000428696 RNF183Q96D59 192 aa10.66□□□□□ -0.7
SGCE-204ENST00000428696 PRELID1Q9Y255 219 aa10.66□□□□□ -0.7
SGCE-204ENST00000428696 CTXND1A0A1B0GTU2 59 aa10.65□□□□□ -0.7
SGCE-204ENST00000428696 J3KRW8 73 aa10.65□□□□□ -0.7
SGCE-204ENST00000428696 M0R2Z0 102 aa10.65□□□□□ -0.7
SGCE-204ENST00000428696 ERCC8Q13216 396 aa10.65□□□□□ -0.7
SGCE-204ENST00000428696 ZNF726P1Q15940 193 aa10.65□□□□□ -0.7
SGCE-204ENST00000428696 SPINK13Q1W4C9 94 aa10.65□□□□□ -0.7
SGCE-204ENST00000428696 FAM74A1Q5RGS3 127 aa10.65□□□□□ -0.7
SGCE-204ENST00000428696 EIF5AL1Q6IS14 154 aaKnown RBP10.65□□□□□ -0.7
SGCE-204ENST00000428696 RARRES2Q99969 163 aa10.65□□□□□ -0.7
SGCE-204ENST00000428696 C1QTNF4Q9BXJ3 329 aa10.65□□□□□ -0.7
SGCE-204ENST00000428696 IGKV2-40A0A087WW87 121 aaPredicted RBP10.64□□□□□ -0.71
SGCE-204ENST00000428696 UMAD1C9J7I0 102 aa10.64□□□□□ -0.71
SGCE-204ENST00000428696 IGKV2D-40P01614 121 aaPredicted RBP10.64□□□□□ -0.71
SGCE-204ENST00000428696 GIG44P09565 113 aaPredicted RBP10.64□□□□□ -0.71
SGCE-204ENST00000428696 SLC51BQ86UW2 128 aa10.64□□□□□ -0.71
SGCE-204ENST00000428696 STOML3Q8TAV4 291 aa10.64□□□□□ -0.71
SGCE-204ENST00000428696 SFT2D1Q8WV19 159 aa10.64□□□□□ -0.71
SGCE-204ENST00000428696 TMPRSS5Q9H3S3 457 aa10.64□□□□□ -0.71
SGCE-204ENST00000428696 TMEM167BQ9NRX6 74 aa10.64□□□□□ -0.71
SGCE-204ENST00000428696 TRAV12-2A0A075B6T6 113 aa10.63□□□□□ -0.71
SGCE-204ENST00000428696 MAP1LC3B2A6NCE7 125 aa10.63□□□□□ -0.71
SGCE-204ENST00000428696 UBE2G2P60604 165 aa10.63□□□□□ -0.71
SGCE-204ENST00000428696 LYPD1Q8N2G4 141 aa10.63□□□□□ -0.71
SGCE-204ENST00000428696 MRPL53Q96EL3 112 aaKnown RBP10.63□□□□□ -0.71
SGCE-204ENST00000428696 TMEM208Q9BTX3 173 aa10.63□□□□□ -0.71
SGCE-204ENST00000428696 MAP1LC3BQ9GZQ8 125 aa10.63□□□□□ -0.71
SGCE-204ENST00000428696 OTORQ9NRC9 128 aa10.63□□□□□ -0.71
SGCE-204ENST00000428696 TP53TG1Q9Y2A0 90 aa10.63□□□□□ -0.71
SGCE-204ENST00000428696 SLC25A5P05141 298 aaKnown RBP10.62□□□□□ -0.71
SGCE-204ENST00000428696 BOLA2-SMG1P6H3BVE0 249 aa10.61□□□□□ -0.71
SGCE-204ENST00000428696 DEFB4AO15263 64 aa10.61□□□□□ -0.71
SGCE-204ENST00000428696 H2AFB1P0C5Y9 115 aa10.61□□□□□ -0.71
SGCE-204ENST00000428696 HTN1P15515 57 aa10.61□□□□□ -0.71
SGCE-204ENST00000428696 SUMO1P63165 101 aaKnown RBP10.61□□□□□ -0.71
SGCE-204ENST00000428696 TMEM78Q5T7P6 136 aa10.61□□□□□ -0.71
SGCE-204ENST00000428696 RXFP4Q8TDU9 374 aa10.61□□□□□ -0.71
SGCE-204ENST00000428696 CLUHP3Q96NS8 147 aa10.61□□□□□ -0.71
SGCE-204ENST00000428696 GOLT1BQ9Y3E0 138 aa10.61□□□□□ -0.71
SGCE-204ENST00000428696 IFNA7P01567 189 aa10.6□□□□□ -0.71
SGCE-204ENST00000428696 CT45A10P0DMU9 189 aa10.6□□□□□ -0.71
SGCE-204ENST00000428696 TSPOP30536 169 aa10.6□□□□□ -0.71
SGCE-204ENST00000428696 AMTNQ6UX39 209 aa10.6□□□□□ -0.71
SGCE-204ENST00000428696 VGLL1Q99990 258 aa10.6□□□□□ -0.71
SGCE-204ENST00000428696 AGPAT4-IT1Q9H0P7 198 aa10.6□□□□□ -0.71
SGCE-204ENST00000428696 HUWE1Q7Z6Z7 4374 aaKnown RBP10.6□□□□□ -0.71
SGCE-204ENST00000428696 A0A0J9YWU9 116 aa10.59□□□□□ -0.71
SGCE-204ENST00000428696 NPIPB6E9PJ23 425 aa10.59□□□□□ -0.71
SGCE-204ENST00000428696 AMBPP02760 352 aa10.59□□□□□ -0.71
SGCE-204ENST00000428696 GNG5P63218 68 aa10.59□□□□□ -0.71
SGCE-204ENST00000428696 CST9LP1Q5W188 147 aa10.59□□□□□ -0.71
SGCE-204ENST00000428696 DPPA3Q6W0C5 159 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms