RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 CLEC5AQ9NY25 188 aa5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 VAX2Q9UIW0 290 aa5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 ZNF256Q9Y2P7 627 aaPredicted RBP5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 ZNF705FA8MVS1 300 aaPredicted RBP5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 G3V4G9 280 aa5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 DEFB131AP59861 70 aa5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 SUMO1P63165 101 aaKnown RBP5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 GNG5P63218 68 aa5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 HIST1H1AQ02539 215 aaPredicted RBP5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 PSG3Q16557 428 aa5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 BEAN1Q3B7T3 259 aa5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 ZNF506Q5JVG8 444 aa5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 GOLT1AQ6ZVE7 132 aa5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 COMMD7Q86VX2 200 aa5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 RPUSD4Q96CM3 377 aaKnown RBP5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 FAM210AQ96ND0 272 aa5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 RARRES2Q99969 163 aa5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 ZMAT5Q9UDW3 170 aaKnown RBP5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 PRELID1Q9Y255 219 aa5.91□□□□□ -1.46
HMGA1P4-201ENST00000428643 IGKV2-40A0A087WW87 121 aaPredicted RBP5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 SCO2A0A1W2PP80 73 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 F6UB75 175 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 F6UZH7 168 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 K7EQM0 130 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 PEX7O00628 323 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 PDE6DO43924 150 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 IGKV2D-40P01614 121 aaPredicted RBP5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 CD7P09564 240 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 AKR1C3P42330 323 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 CEBPGP53567 150 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 CMC4P56277 68 aaPredicted RBP5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 DEFB1P60022 68 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 PMS2P11Q13670 270 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 ODF3L2Q3SX64 289 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 ACTL10Q5JWF8 245 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 OR10J6PQ8NGY7 276 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 MRPL53Q96EL3 112 aaKnown RBP5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 PRR25Q96S07 402 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 TXNDC17Q9BRA2 123 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 TCEAL7Q9BRU2 100 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 ATG101Q9BSB4 218 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 TREM1Q9NP99 234 aa5.9□□□□□ -1.46
HMGA1P4-201ENST00000428643 RAB19A4D1S5 217 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 KNCNA6PVL3 124 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 PRAC2D3DTV9 90 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 TCRAP04437 139 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 PEA15Q15121 130 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 ZNF124Q15973 351 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 SAMD5Q5TGI4 173 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 EBLN2Q6P2I7 272 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 FOXI2Q6ZQN5 318 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 APRG1Q8IVJ8 170 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 CCDC28AQ8IWP9 274 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 CYB561D1Q8N8Q1 229 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 OR8A1Q8NGG7 326 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 HIST1H2BAQ96A08 127 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 WFDC10AQ9H1F0 79 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 MED9Q9NWA0 146 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 EPDR1Q9UM22 224 aa5.89□□□□□ -1.47
HMGA1P4-201ENST00000428643 TRAV8-1A0A0A6YYK1 113 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 A0A0J9YX75 114 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 SERTM2A0A1B0GWG4 89 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 LINC00862A6NCI5 91 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 DIRC3C9JPN6 131 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 IGKV3-20P01619 116 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 ZNF705DP0CH99 300 aaPredicted RBP5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 ZNF705BP0CI00 300 aaPredicted RBP5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 CNN1P51911 297 aaKnown RBP5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 KRTAP10-11P60412 298 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 UBE2G1P62253 170 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 SRSF3P84103 164 aaKnown RBP5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 EGFEM1PQ0D2K5 195 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 ERCC8Q13216 396 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 ZNF674Q2M3X9 581 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 TMEM78Q5T7P6 136 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 GDF5OSQ5U4N7 250 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 OR4B1Q8NGF8 309 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 Q8TAT8 98 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 C11orf52Q96A22 123 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 SGK494Q96LW2 274 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 SAV1Q9H4B6 383 aaPredicted RBP5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 PPP1R14DQ9NXH3 145 aa5.88□□□□□ -1.47
HMGA1P4-201ENST00000428643 NOTCH3Q9UM47 2321 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 MGAM2Q2M2H8 2515 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 TRAV34A0A0B4J273 112 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 NPIPB6E9PJ23 425 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 TMEM250H0YL14 139 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 DUSP14O95147 198 aaKnown RBP5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 SRP19P09132 144 aaKnown RBP5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 SFTA3P0C7M3 94 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 HLA-DRB4P13762 266 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 UQCC3Q6UW78 93 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 Q86TA4 180 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 STHQ8IWL8 128 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 DEFB125Q8N687 156 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 ARL6IP6Q8N6S5 226 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 C2CD4CQ8TF44 421 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 FMC1Q96HJ9 113 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 LINC00479Q96M42 142 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 VGLL1Q99990 258 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms