RNA–Protein interactions for RNA: ENST00000428253.1

MMP11-202, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 537 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-202ENST00000428253 STAG3L2P0CL84 134 aa13.01□□□□□ -0.33
MMP11-202ENST00000428253 STAG3L3P0CL85 134 aa13.01□□□□□ -0.33
MMP11-202ENST00000428253 CDC34P49427 236 aaPredicted RBP13.01□□□□□ -0.33
MMP11-202ENST00000428253 PSG9Q00887 426 aa13.01□□□□□ -0.33
MMP11-202ENST00000428253 LGALSLQ3ZCW2 172 aaPredicted RBP13.01□□□□□ -0.33
MMP11-202ENST00000428253 PQLC2Q6ZP29 291 aa13.01□□□□□ -0.33
MMP11-202ENST00000428253 TMUB2Q71RG4 321 aa13.01□□□□□ -0.33
MMP11-202ENST00000428253 AKAP14Q86UN6 197 aa13.01□□□□□ -0.33
MMP11-202ENST00000428253 RAB24Q969Q5 203 aa13.01□□□□□ -0.33
MMP11-202ENST00000428253 SLC35B3Q9H1N7 401 aa13.01□□□□□ -0.33
MMP11-202ENST00000428253 M0R3E3 92 aa13□□□□□ -0.33
MMP11-202ENST00000428253 PRB4P10163 310 aaPredicted RBP13□□□□□ -0.33
MMP11-202ENST00000428253 EXOC3-AS1Q8N2X6 119 aa13□□□□□ -0.33
MMP11-202ENST00000428253 PHYHIPLQ96FC7 376 aa13□□□□□ -0.33
MMP11-202ENST00000428253 C1QTNF4Q9BXJ3 329 aa13□□□□□ -0.33
MMP11-202ENST00000428253 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
MMP11-202ENST00000428253 XCL2Q9UBD3 114 aa13□□□□□ -0.33
MMP11-202ENST00000428253 PRELID1Q9Y255 219 aa13□□□□□ -0.33
MMP11-202ENST00000428253 ZNF705EA8MWA4 302 aaPredicted RBP12.99□□□□□ -0.33
MMP11-202ENST00000428253 UBE2L3P68036 154 aaKnown RBP12.99□□□□□ -0.33
MMP11-202ENST00000428253 ZNF726P1Q15940 193 aa12.99□□□□□ -0.33
MMP11-202ENST00000428253 SSX7Q7RTT5 188 aa12.99□□□□□ -0.33
MMP11-202ENST00000428253 LYPD1Q8N2G4 141 aa12.99□□□□□ -0.33
MMP11-202ENST00000428253 SUN5Q8TC36 379 aa12.99□□□□□ -0.33
MMP11-202ENST00000428253 HYLS1Q96M11 299 aa12.99□□□□□ -0.33
MMP11-202ENST00000428253 RARRES2Q99969 163 aa12.99□□□□□ -0.33
MMP11-202ENST00000428253 KANTRA0A1W2PQU2 76 aa12.98□□□□□ -0.33
MMP11-202ENST00000428253 HMGB3O15347 200 aaKnown RBP12.98□□□□□ -0.33
MMP11-202ENST00000428253 FXYD7P58549 80 aa12.98□□□□□ -0.33
MMP11-202ENST00000428253 HIST1H1AQ02539 215 aaPredicted RBP12.98□□□□□ -0.33
MMP11-202ENST00000428253 ICAM4Q14773 271 aa12.98□□□□□ -0.33
MMP11-202ENST00000428253 OR11H2Q8NH07 326 aa12.98□□□□□ -0.33
MMP11-202ENST00000428253 X6R8D5 127 aa12.98□□□□□ -0.33
MMP11-202ENST00000428253 NPIPB6E9PJ23 425 aa12.97□□□□□ -0.33
MMP11-202ENST00000428253 CRXO43186 299 aaPredicted RBP12.97□□□□□ -0.33
MMP11-202ENST00000428253 SEC11BP0C7V7 166 aa12.97□□□□□ -0.33
MMP11-202ENST00000428253 ARL14EPLP0DKL9 152 aa12.97□□□□□ -0.33
MMP11-202ENST00000428253 ZNF705AQ6ZN79 300 aaPredicted RBP12.97□□□□□ -0.33
MMP11-202ENST00000428253 ZNF471Q9BX82 626 aaPredicted RBP12.97□□□□□ -0.33
MMP11-202ENST00000428253 ACTR3CQ9C0K3 210 aaPredicted RBP12.97□□□□□ -0.33
MMP11-202ENST00000428253 AAMDCQ9H7C9 122 aa12.97□□□□□ -0.33
MMP11-202ENST00000428253 RANP62826 216 aaKnown RBP12.96□□□□□ -0.33
MMP11-202ENST00000428253 STOML3Q8TAV4 291 aa12.96□□□□□ -0.33
MMP11-202ENST00000428253 Q9H3A6 140 aa12.96□□□□□ -0.33
MMP11-202ENST00000428253 DNAH7Q8WXX0 4024 aa12.95□□□□□ -0.34
MMP11-202ENST00000428253 CTXND1A0A1B0GTU2 59 aa12.95□□□□□ -0.34
MMP11-202ENST00000428253 BOLA2-SMG1P6H3BVE0 249 aa12.95□□□□□ -0.34
MMP11-202ENST00000428253 AMBPP02760 352 aa12.95□□□□□ -0.34
MMP11-202ENST00000428253 GCHFRP30047 84 aa12.95□□□□□ -0.34
MMP11-202ENST00000428253 AKR1C8PQ5T2L2 129 aa12.95□□□□□ -0.34
MMP11-202ENST00000428253 BAP18Q8IXM2 172 aa12.95□□□□□ -0.34
MMP11-202ENST00000428253 C1orf158Q8N1D5 194 aa12.95□□□□□ -0.34
MMP11-202ENST00000428253 Q8NAQ8 132 aa12.95□□□□□ -0.34
MMP11-202ENST00000428253 OR10J6PQ8NGY7 276 aa12.95□□□□□ -0.34
MMP11-202ENST00000428253 IGF2BP2-AS1Q96M15 143 aa12.95□□□□□ -0.34
MMP11-202ENST00000428253 A0A0J9YWU9 116 aa12.94□□□□□ -0.34
MMP11-202ENST00000428253 M0R2Z0 102 aa12.94□□□□□ -0.34
MMP11-202ENST00000428253 PFDN1O60925 122 aa12.94□□□□□ -0.34
MMP11-202ENST00000428253 CXorf1O96002 111 aa12.94□□□□□ -0.34
MMP11-202ENST00000428253 SPINK13Q1W4C9 94 aa12.94□□□□□ -0.34
MMP11-202ENST00000428253 C9orf47Q6ZRZ4 202 aa12.94□□□□□ -0.34
MMP11-202ENST00000428253 ODF3Q96PU9 254 aa12.94□□□□□ -0.34
MMP11-202ENST00000428253 NEU1Q99519 415 aa12.94□□□□□ -0.34
MMP11-202ENST00000428253 C11orf68Q9H3H3 251 aaKnown RBP12.94□□□□□ -0.34
MMP11-202ENST00000428253 CT45A10P0DMU9 189 aa12.93□□□□□ -0.34
MMP11-202ENST00000428253 EIF5AP63241 154 aaKnown RBP12.93□□□□□ -0.34
MMP11-202ENST00000428253 C9orf62Q8N4C0 152 aa12.93□□□□□ -0.34
MMP11-202ENST00000428253 FAM19A4Q96LR4 140 aa12.93□□□□□ -0.34
MMP11-202ENST00000428253 AGPAT4-IT1Q9H0P7 198 aa12.93□□□□□ -0.34
MMP11-202ENST00000428253 OTORQ9NRC9 128 aa12.93□□□□□ -0.34
MMP11-202ENST00000428253 UMAD1C9J7I0 102 aa12.92□□□□□ -0.34
MMP11-202ENST00000428253 TPT1P13693 172 aaKnown RBP12.92□□□□□ -0.34
MMP11-202ENST00000428253 MIFP14174 115 aa12.92□□□□□ -0.34
MMP11-202ENST00000428253 ARL6IP6Q8N6S5 226 aa12.92□□□□□ -0.34
MMP11-202ENST00000428253 LINC00477Q96M19 166 aa12.92□□□□□ -0.34
MMP11-202ENST00000428253 IGKV2-40A0A087WW87 121 aaPredicted RBP12.91□□□□□ -0.34
MMP11-202ENST00000428253 IGKV2D-40P01614 121 aaPredicted RBP12.91□□□□□ -0.34
MMP11-202ENST00000428253 RBMY1A1P0DJD3 496 aaKnown RBP12.91□□□□□ -0.34
MMP11-202ENST00000428253 RBMY1CP0DJD4 496 aa12.91□□□□□ -0.34
MMP11-202ENST00000428253 CDKN1BP46527 198 aa12.91□□□□□ -0.34
MMP11-202ENST00000428253 FHITP49789 147 aa12.91□□□□□ -0.34
MMP11-202ENST00000428253 ERCC8Q13216 396 aa12.91□□□□□ -0.34
MMP11-202ENST00000428253 RBMY1FQ15415 496 aaKnown RBP12.91□□□□□ -0.34
MMP11-202ENST00000428253 MUC7Q8TAX7 377 aa12.91□□□□□ -0.34
MMP11-202ENST00000428253 VGLL1Q99990 258 aa12.91□□□□□ -0.34
MMP11-202ENST00000428253 TMEM167BQ9NRX6 74 aa12.91□□□□□ -0.34
MMP11-202ENST00000428253 TRAV12-2A0A075B6T6 113 aa12.9□□□□□ -0.34
MMP11-202ENST00000428253 IGHV4-28A0A0C4DH34 117 aa12.9□□□□□ -0.34
MMP11-202ENST00000428253 RBAKDNA6NC62 111 aa12.9□□□□□ -0.34
MMP11-202ENST00000428253 PGPA6NDG6 321 aa12.9□□□□□ -0.34
MMP11-202ENST00000428253 DIRC3C9JPN6 131 aa12.9□□□□□ -0.34
MMP11-202ENST00000428253 SLC25A5P05141 298 aaKnown RBP12.9□□□□□ -0.34
MMP11-202ENST00000428253 KIR3DS1Q14943 382 aa12.9□□□□□ -0.34
MMP11-202ENST00000428253 ZFP69Q49AA0 526 aa12.9□□□□□ -0.34
MMP11-202ENST00000428253 RXFP4Q8TDU9 374 aa12.9□□□□□ -0.34
MMP11-202ENST00000428253 TMED6Q8WW62 240 aa12.9□□□□□ -0.34
MMP11-202ENST00000428253 SMIM9A6NGZ8 99 aa12.89□□□□□ -0.35
MMP11-202ENST00000428253 INSP01308 110 aa12.89□□□□□ -0.35
MMP11-202ENST00000428253 SLC51BQ86UW2 128 aa12.89□□□□□ -0.35
MMP11-202ENST00000428253 IL17DQ8TAD2 202 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms