RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 PRAC2D3DTV9 90 aa13.68□□□□□ -0.22
COL9A2-204ENST00000427563 MPDU1O75352 247 aa13.68□□□□□ -0.22
COL9A2-204ENST00000427563 CXCL2P19875 107 aa13.68□□□□□ -0.22
COL9A2-204ENST00000427563 EMP1P54849 157 aa13.68□□□□□ -0.22
COL9A2-204ENST00000427563 HIST1H1AQ02539 215 aaPredicted RBP13.68□□□□□ -0.22
COL9A2-204ENST00000427563 RAB31Q13636 194 aa13.68□□□□□ -0.22
COL9A2-204ENST00000427563 GCSAMLQ5JQS6 135 aa13.68□□□□□ -0.22
COL9A2-204ENST00000427563 S100A7AQ86SG5 101 aa13.68□□□□□ -0.22
COL9A2-204ENST00000427563 BPIFA4PQ86YQ2 179 aa13.68□□□□□ -0.22
COL9A2-204ENST00000427563 BAP18Q8IXM2 172 aa13.68□□□□□ -0.22
COL9A2-204ENST00000427563 GOLT1BQ9Y3E0 138 aa13.68□□□□□ -0.22
COL9A2-204ENST00000427563 PXMP4Q9Y6I8 212 aa13.68□□□□□ -0.22
COL9A2-204ENST00000427563 TRAV12-2A0A075B6T6 113 aa13.67□□□□□ -0.22
COL9A2-204ENST00000427563 IFNA5P01569 189 aa13.67□□□□□ -0.22
COL9A2-204ENST00000427563 ZNF345Q14585 488 aa13.67□□□□□ -0.22
COL9A2-204ENST00000427563 LCN15Q6UWW0 184 aa13.67□□□□□ -0.22
COL9A2-204ENST00000427563 Q6ZRG5 221 aa13.67□□□□□ -0.22
COL9A2-204ENST00000427563 RPUSD4Q96CM3 377 aaKnown RBP13.67□□□□□ -0.22
COL9A2-204ENST00000427563 NPCDR1Q9BY65 106 aa13.67□□□□□ -0.22
COL9A2-204ENST00000427563 PARD6GQ9BYG4 376 aaPredicted RBP13.67□□□□□ -0.22
COL9A2-204ENST00000427563 DKK2Q9UBU2 259 aa13.67□□□□□ -0.22
COL9A2-204ENST00000427563 IGHV4-4A0A075B6R2 117 aa13.66□□□□□ -0.22
COL9A2-204ENST00000427563 LOC102723971A0A1B0GUV8 181 aa13.66□□□□□ -0.22
COL9A2-204ENST00000427563 BOLA2-SMG1P6H3BVE0 249 aa13.66□□□□□ -0.22
COL9A2-204ENST00000427563 ZNF266Q14584 549 aa13.66□□□□□ -0.22
COL9A2-204ENST00000427563 FAM222AQ5U5X8 452 aa13.66□□□□□ -0.22
COL9A2-204ENST00000427563 KCNRGQ8N5I3 272 aa13.66□□□□□ -0.22
COL9A2-204ENST00000427563 OR1L4Q8NGR5 311 aa13.66□□□□□ -0.22
COL9A2-204ENST00000427563 LRRC20Q8TCA0 184 aa13.66□□□□□ -0.22
COL9A2-204ENST00000427563 SLC50A1Q9BRV3 221 aa13.66□□□□□ -0.22
COL9A2-204ENST00000427563 ZNF586Q9NXT0 402 aa13.66□□□□□ -0.22
COL9A2-204ENST00000427563 RNF24Q9Y225 148 aa13.66□□□□□ -0.22
COL9A2-204ENST00000427563 DEFB131BA0A096LNP1 70 aa13.65□□□□□ -0.22
COL9A2-204ENST00000427563 TMEM189A5PLL7 270 aa13.65□□□□□ -0.22
COL9A2-204ENST00000427563 SCGB1C1Q8TD33 95 aa13.65□□□□□ -0.22
COL9A2-204ENST00000427563 HYLS1Q96M11 299 aa13.65□□□□□ -0.22
COL9A2-204ENST00000427563 A0A0D9SG52 128 aa13.64□□□□□ -0.23
COL9A2-204ENST00000427563 ZNF705GA8MUZ8 300 aaPredicted RBP13.64□□□□□ -0.23
COL9A2-204ENST00000427563 HBE1P02100 147 aa13.64□□□□□ -0.23
COL9A2-204ENST00000427563 AMBPP02760 352 aa13.64□□□□□ -0.23
COL9A2-204ENST00000427563 SPART-AS1P0CW21 52 aa13.64□□□□□ -0.23
COL9A2-204ENST00000427563 TCTAP57738 103 aa13.64□□□□□ -0.23
COL9A2-204ENST00000427563 KIR3DS1Q14943 382 aa13.64□□□□□ -0.23
COL9A2-204ENST00000427563 PFDN5Q99471 154 aa13.64□□□□□ -0.23
COL9A2-204ENST00000427563 YTHDF2Q9Y5A9 579 aaKnown RBP13.64□□□□□ -0.23
COL9A2-204ENST00000427563 PLAC8L1A1L4L8 177 aa13.63□□□□□ -0.23
COL9A2-204ENST00000427563 TAAR5O14804 337 aa13.63□□□□□ -0.23
COL9A2-204ENST00000427563 INSP01308 110 aa13.63□□□□□ -0.23
COL9A2-204ENST00000427563 AZU1P20160 251 aa13.63□□□□□ -0.23
COL9A2-204ENST00000427563 RHOBP62745 196 aa13.63□□□□□ -0.23
COL9A2-204ENST00000427563 RRN3P1Q2M238 152 aa13.63□□□□□ -0.23
COL9A2-204ENST00000427563 ZFP69Q49AA0 526 aa13.63□□□□□ -0.23
COL9A2-204ENST00000427563 RPL7L1Q6DKI1 246 aaKnown RBP13.63□□□□□ -0.23
COL9A2-204ENST00000427563 NDUFB4O95168 129 aa13.62□□□□□ -0.23
COL9A2-204ENST00000427563 PYYP10082 97 aa13.62□□□□□ -0.23
COL9A2-204ENST00000427563 FAM167A-AS1Q96KT0 104 aa13.62□□□□□ -0.23
COL9A2-204ENST00000427563 ARPC5LQ9BPX5 153 aa13.62□□□□□ -0.23
COL9A2-204ENST00000427563 CYTL1Q9NRR1 136 aa13.62□□□□□ -0.23
COL9A2-204ENST00000427563 KCNIP2Q9NS61 270 aa13.62□□□□□ -0.23
COL9A2-204ENST00000427563 BORCS7-ASMTA0A0B4J1R7 106 aa13.61□□□□□ -0.23
COL9A2-204ENST00000427563 C17orf112F2Z3M2 114 aa13.61□□□□□ -0.23
COL9A2-204ENST00000427563 LGALSLQ3ZCW2 172 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-204ENST00000427563 TMUB2Q71RG4 321 aa13.61□□□□□ -0.23
COL9A2-204ENST00000427563 NIPSNAP3BQ9BS92 247 aa13.61□□□□□ -0.23
COL9A2-204ENST00000427563 TMEM208Q9BTX3 173 aa13.61□□□□□ -0.23
COL9A2-204ENST00000427563 SLC25A2Q9BXI2 301 aa13.61□□□□□ -0.23
COL9A2-204ENST00000427563 TMEM14CQ9P0S9 112 aa13.61□□□□□ -0.23
COL9A2-204ENST00000427563 TRBV19A0A075B6N1 114 aa13.6□□□□□ -0.23
COL9A2-204ENST00000427563 BCL2L11O43521 198 aa13.6□□□□□ -0.23
COL9A2-204ENST00000427563 MIR17HGQ75NE6 70 aa13.6□□□□□ -0.23
COL9A2-204ENST00000427563 HSD17B11Q8NBQ5 300 aa13.6□□□□□ -0.23
COL9A2-204ENST00000427563 TIMM9Q9Y5J7 89 aa13.6□□□□□ -0.23
COL9A2-204ENST00000427563 KANTRA0A1W2PQU2 76 aa13.59□□□□□ -0.23
COL9A2-204ENST00000427563 M0R3E3 92 aa13.59□□□□□ -0.23
COL9A2-204ENST00000427563 PFDN1O60925 122 aa13.59□□□□□ -0.23
COL9A2-204ENST00000427563 ZNF253O75346 499 aa13.59□□□□□ -0.23
COL9A2-204ENST00000427563 ATP6V0CP27449 155 aa13.59□□□□□ -0.23
COL9A2-204ENST00000427563 GUK1Q16774 197 aa13.59□□□□□ -0.23
COL9A2-204ENST00000427563 C9orf62Q8N4C0 152 aa13.59□□□□□ -0.23
COL9A2-204ENST00000427563 CT45A10P0DMU9 189 aa13.58□□□□□ -0.24
COL9A2-204ENST00000427563 HIST1H1EP10412 219 aaKnown RBP13.58□□□□□ -0.24
COL9A2-204ENST00000427563 TSPOP30536 169 aa13.58□□□□□ -0.24
COL9A2-204ENST00000427563 CDKN1BP46527 198 aa13.58□□□□□ -0.24
COL9A2-204ENST00000427563 PSMG3Q9BT73 122 aaPredicted RBP13.58□□□□□ -0.24
COL9A2-204ENST00000427563 NPIPB6E9PJ23 425 aa13.57□□□□□ -0.24
COL9A2-204ENST00000427563 FFAR4Q5NUL3 377 aa13.57□□□□□ -0.24
COL9A2-204ENST00000427563 GFI1BQ5VTD9 330 aa13.57□□□□□ -0.24
COL9A2-204ENST00000427563 TEX48A0A1B0GUV7 120 aa13.56□□□□□ -0.24
COL9A2-204ENST00000427563 NKX2-5P52952 324 aaPredicted RBP13.56□□□□□ -0.24
COL9A2-204ENST00000427563 ERCC8Q13216 396 aa13.56□□□□□ -0.24
COL9A2-204ENST00000427563 EXOC3-AS1Q8N2X6 119 aa13.56□□□□□ -0.24
COL9A2-204ENST00000427563 OR10J6PQ8NGY7 276 aa13.56□□□□□ -0.24
COL9A2-204ENST00000427563 OR2G3Q8NGZ4 309 aa13.56□□□□□ -0.24
COL9A2-204ENST00000427563 GNPNAT1Q96EK6 184 aaPredicted RBP13.56□□□□□ -0.24
COL9A2-204ENST00000427563 ZNF503Q96F45 646 aa13.56□□□□□ -0.24
COL9A2-204ENST00000427563 LINC01587Q99440 93 aa13.56□□□□□ -0.24
COL9A2-204ENST00000427563 ZNF471Q9BX82 626 aaPredicted RBP13.56□□□□□ -0.24
COL9A2-204ENST00000427563 SH3BGRL3Q9H299 93 aa13.56□□□□□ -0.24
COL9A2-204ENST00000427563 PPP1R14DQ9NXH3 145 aa13.56□□□□□ -0.24
COL9A2-204ENST00000427563 DNAH2Q9P225 4427 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms