RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 YPEL3P61236 119 aaPredicted RBP11.76□□□□□ -0.53
PTPN13-203ENST00000427191 FOXF2Q12947 444 aa11.75□□□□□ -0.53
PTPN13-203ENST00000427191 CRLF1O75462 422 aa11.75□□□□□ -0.53
PTPN13-203ENST00000427191 TCF20Q9UGU0 1960 aaKnown RBP11.75□□□□□ -0.53
PTPN13-203ENST00000427191 CTSBP07858 339 aa11.75□□□□□ -0.53
PTPN13-203ENST00000427191 LGALS9BQ3B8N2 356 aa11.75□□□□□ -0.53
PTPN13-203ENST00000427191 LGALS9CQ6DKI2 356 aa11.75□□□□□ -0.53
PTPN13-203ENST00000427191 ZCCHC24Q8N2G6 241 aaKnown RBP11.75□□□□□ -0.53
PTPN13-203ENST00000427191 AMN1Q8IY45 258 aa11.75□□□□□ -0.53
PTPN13-203ENST00000427191 COX8AP10176 69 aa11.75□□□□□ -0.53
PTPN13-203ENST00000427191 FAM104BQ5XKR9 115 aa11.75□□□□□ -0.53
PTPN13-203ENST00000427191 ZNF837Q96EG3 531 aaPredicted RBP11.75□□□□□ -0.53
PTPN13-203ENST00000427191 REG4Q9BYZ8 158 aa11.75□□□□□ -0.53
PTPN13-203ENST00000427191 ANKRD29Q8N6D5 301 aa11.75□□□□□ -0.53
PTPN13-203ENST00000427191 TCF15Q12870 199 aa11.74□□□□□ -0.53
PTPN13-203ENST00000427191 TMEM243Q9BU79 118 aa11.74□□□□□ -0.53
PTPN13-203ENST00000427191 FAM231DQ6ZW35 169 aa11.74□□□□□ -0.53
PTPN13-203ENST00000427191 ZNF664Q8N3J9 261 aa11.74□□□□□ -0.53
PTPN13-203ENST00000427191 LINC01356Q8N9X3 169 aa11.74□□□□□ -0.53
PTPN13-203ENST00000427191 KLHL30-AS1Q8NEE0 82 aa11.74□□□□□ -0.53
PTPN13-203ENST00000427191 RHPN1-AS1Q9BWJ2 59 aa11.74□□□□□ -0.53
PTPN13-203ENST00000427191 IGKV1-5P01602 117 aa11.73□□□□□ -0.53
PTPN13-203ENST00000427191 HLA-DRB4P13762 266 aa11.73□□□□□ -0.53
PTPN13-203ENST00000427191 C2orf66Q6UXQ4 117 aa11.73□□□□□ -0.53
PTPN13-203ENST00000427191 HLA-DRB4X5D2U9 266 aa11.73□□□□□ -0.53
PTPN13-203ENST00000427191 FGF6P10767 208 aa11.73□□□□□ -0.53
PTPN13-203ENST00000427191 CEND1Q8N111 149 aa11.73□□□□□ -0.53
PTPN13-203ENST00000427191 CACNA1HO95180 2353 aa11.73□□□□□ -0.53
PTPN13-203ENST00000427191 C1orf122Q6ZSJ8 110 aa11.73□□□□□ -0.53
PTPN13-203ENST00000427191 C20orf78Q9BR46 151 aa11.73□□□□□ -0.53
PTPN13-203ENST00000427191 TMEM14CQ9P0S9 112 aa11.73□□□□□ -0.53
PTPN13-203ENST00000427191 SPRR3Q9UBC9 169 aa11.73□□□□□ -0.53
PTPN13-203ENST00000427191 A0A1W2PPM0 123 aa11.72□□□□□ -0.53
PTPN13-203ENST00000427191 K7EP13 123 aa11.72□□□□□ -0.53
PTPN13-203ENST00000427191 HAMPP81172 84 aa11.72□□□□□ -0.53
PTPN13-203ENST00000427191 PYGO2Q9BRQ0 406 aa11.72□□□□□ -0.53
PTPN13-203ENST00000427191 BMPERQ8N8U9 685 aa11.72□□□□□ -0.53
PTPN13-203ENST00000427191 LTBRP36941 435 aa11.72□□□□□ -0.53
PTPN13-203ENST00000427191 C15orf62A8K5M9 175 aa11.72□□□□□ -0.53
PTPN13-203ENST00000427191 FOXG1P55316 489 aaPredicted RBP11.72□□□□□ -0.53
PTPN13-203ENST00000427191 SMIM20Q8N5G0 67 aa11.72□□□□□ -0.53
PTPN13-203ENST00000427191 NAA38Q9BRA0 125 aaKnown RBP11.72□□□□□ -0.53
PTPN13-203ENST00000427191 NTN3O00634 580 aaPredicted RBP11.71□□□□□ -0.53
PTPN13-203ENST00000427191 F8VRH5 84 aa11.71□□□□□ -0.53
PTPN13-203ENST00000427191 TGFBR3LH3BV60 316 aa11.71□□□□□ -0.53
PTPN13-203ENST00000427191 RNASE2P10153 161 aaKnown RBP11.71□□□□□ -0.53
PTPN13-203ENST00000427191 Q8TAT8 98 aa11.71□□□□□ -0.53
PTPN13-203ENST00000427191 FNDC1Q4ZHG4 1894 aaPredicted RBP11.71□□□□□ -0.53
PTPN13-203ENST00000427191 ARMS2P0C7Q2 107 aa11.71□□□□□ -0.53
PTPN13-203ENST00000427191 C18orf32Q8TCD1 76 aa11.71□□□□□ -0.53
PTPN13-203ENST00000427191 MCRIP2Q9BUT9 160 aaKnown RBP11.71□□□□□ -0.53
PTPN13-203ENST00000427191 TMEM14BQ9NUH8 114 aa11.71□□□□□ -0.53
PTPN13-203ENST00000427191 H3BUX3 64 aa11.71□□□□□ -0.54
PTPN13-203ENST00000427191 NTF4P34130 210 aa11.71□□□□□ -0.54
PTPN13-203ENST00000427191 FUSP35637 526 aaKnown RBP eCLIP11.71□□□□□ -0.54
PTPN13-203ENST00000427191 GAGE12HA6NDE8 117 aa11.71□□□□□ -0.54
PTPN13-203ENST00000427191 RPL35AP18077 110 aaKnown RBP11.71□□□□□ -0.54
PTPN13-203ENST00000427191 CD24P25063 80 aa11.71□□□□□ -0.54
PTPN13-203ENST00000427191 hADV29S1A0JD25 119 aa11.71□□□□□ -0.54
PTPN13-203ENST00000427191 DAD1P61803 113 aa11.71□□□□□ -0.54
PTPN13-203ENST00000427191 KLF5Q13887 457 aaPredicted RBP11.7□□□□□ -0.54
PTPN13-203ENST00000427191 A0A087WWL8 130 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 GFI1Q99684 422 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 KLHDC3Q9BQ90 382 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 LYPD3O95274 346 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 RBM3P98179 157 aaKnown RBP11.7□□□□□ -0.54
PTPN13-203ENST00000427191 GAGE12JA6NER3 117 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 GAGE7O76087 117 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 GAGE12FP0CL80 117 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 GAGE12GP0CL81 117 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 GAGE12IP0CL82 117 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 GAGE4Q13068 117 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 GGNQ86UU5 652 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 SCRT2Q9NQ03 307 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 IGKV1D-8A0A087WSZ0 117 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 SMIM27A0A1W2PRY6 76 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 VWA8A3KMH1 1905 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 COL4A1P02462 1669 aa11.7□□□□□ -0.54
PTPN13-203ENST00000427191 FAM110DQ8TAY7 271 aaPredicted RBP11.7□□□□□ -0.54
PTPN13-203ENST00000427191 KLRD1Q13241 179 aa11.69□□□□□ -0.54
PTPN13-203ENST00000427191 RHOHQ15669 191 aa11.69□□□□□ -0.54
PTPN13-203ENST00000427191 HERV-K104P63124 156 aa11.69□□□□□ -0.54
PTPN13-203ENST00000427191 CARD19Q96LW7 228 aa11.69□□□□□ -0.54
PTPN13-203ENST00000427191 NDUFA12Q9UI09 145 aa11.69□□□□□ -0.54
PTPN13-203ENST00000427191 PRSS47A8MTI9 375 aa11.69□□□□□ -0.54
PTPN13-203ENST00000427191 POLR3KQ9Y2Y1 108 aaPredicted RBP11.69□□□□□ -0.54
PTPN13-203ENST00000427191 LCNL1Q6ZST4 164 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 GAFA1Q96PS6 74 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 ORMDL1Q9P0S3 153 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 IGKV1-12A0A0C4DH73 117 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 IGKV1D-12P01611 117 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 ZFP36L1Q07352 338 aaKnown RBP11.68□□□□□ -0.54
PTPN13-203ENST00000427191 ANAPC1Q9H1A4 1944 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 CDKN1BP46527 198 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 Q6P435 159 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 CD177Q8N6Q3 437 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 TSSC4Q9Y5U2 329 aaPredicted RBP11.68□□□□□ -0.54
PTPN13-203ENST00000427191 SHISA9B4DS77 424 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 HS3ST6Q96QI5 342 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 LY6DQ14210 128 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms