RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 RRAS2P62070 204 aaPredicted RBP9.95□□□□□ -0.82
PDAP1-202ENST00000426447 PATE2Q6UY27 113 aa9.95□□□□□ -0.82
PDAP1-202ENST00000426447 LINC00305Q7Z4B0 112 aa9.95□□□□□ -0.82
PDAP1-202ENST00000426447 BPIFA4PQ86YQ2 179 aa9.95□□□□□ -0.82
PDAP1-202ENST00000426447 LRTM2Q8N967 370 aa9.95□□□□□ -0.82
PDAP1-202ENST00000426447 ZBTB8BQ8NAP8 495 aaPredicted RBP9.95□□□□□ -0.82
PDAP1-202ENST00000426447 ZNF680Q8NEM1 530 aa9.95□□□□□ -0.82
PDAP1-202ENST00000426447 MRPS26Q9BYN8 205 aaKnown RBP9.95□□□□□ -0.82
PDAP1-202ENST00000426447 PSENENQ9NZ42 101 aa9.95□□□□□ -0.82
PDAP1-202ENST00000426447 IGLV5-52A0A0A0MRZ9 124 aa9.94□□□□□ -0.82
PDAP1-202ENST00000426447 GOSR2O14653 212 aa9.94□□□□□ -0.82
PDAP1-202ENST00000426447 IGHV3-53P01767 116 aa9.94□□□□□ -0.82
PDAP1-202ENST00000426447 EVI2AP22794 236 aa9.94□□□□□ -0.82
PDAP1-202ENST00000426447 SLAQ13239 276 aa9.94□□□□□ -0.82
PDAP1-202ENST00000426447 MRPL23Q16540 153 aaKnown RBP9.94□□□□□ -0.82
PDAP1-202ENST00000426447 NPVFQ9HCQ7 196 aa9.94□□□□□ -0.82
PDAP1-202ENST00000426447 PRO0255Q9UI72 69 aa9.94□□□□□ -0.82
PDAP1-202ENST00000426447 HHLA3Q9XRX5 114 aa9.94□□□□□ -0.82
PDAP1-202ENST00000426447 SRRM2Q9UQ35 2752 aaKnown RBP9.93□□□□□ -0.82
PDAP1-202ENST00000426447 LINC00854A0A1B0GVQ3 168 aa9.93□□□□□ -0.82
PDAP1-202ENST00000426447 PRAF2O60831 178 aa9.93□□□□□ -0.82
PDAP1-202ENST00000426447 PXDC1Q5TGL8 231 aa9.93□□□□□ -0.82
PDAP1-202ENST00000426447 NEGR1Q7Z3B1 354 aa9.93□□□□□ -0.82
PDAP1-202ENST00000426447 LINC00467Q9BRT7 94 aa9.93□□□□□ -0.82
PDAP1-202ENST00000426447 TMEM70Q9BUB7 260 aa9.93□□□□□ -0.82
PDAP1-202ENST00000426447 RSL24D1Q9UHA3 163 aaKnown RBP9.93□□□□□ -0.82
PDAP1-202ENST00000426447 KLF12Q9Y4X4 402 aa9.93□□□□□ -0.82
PDAP1-202ENST00000426447 PXMP4Q9Y6I8 212 aa9.93□□□□□ -0.82
PDAP1-202ENST00000426447 VPS13BQ7Z7G8 4022 aa9.92□□□□□ -0.82
PDAP1-202ENST00000426447 K7EP13 123 aa9.92□□□□□ -0.82
PDAP1-202ENST00000426447 SLC17A3O00476 420 aa9.92□□□□□ -0.82
PDAP1-202ENST00000426447 PSCAO43653 123 aa9.92□□□□□ -0.82
PDAP1-202ENST00000426447 SLC25A5P05141 298 aaKnown RBP9.92□□□□□ -0.82
PDAP1-202ENST00000426447 FAUP35544 74 aaKnown RBP9.92□□□□□ -0.82
PDAP1-202ENST00000426447 POLR2GP62487 172 aaKnown RBP eCLIP9.92□□□□□ -0.82
PDAP1-202ENST00000426447 SLC38A11Q08AI6 406 aa9.92□□□□□ -0.82
PDAP1-202ENST00000426447 TEPPQ6URK8 271 aa9.92□□□□□ -0.82
PDAP1-202ENST00000426447 EIF4E3Q8N5X7 224 aaKnown RBP9.92□□□□□ -0.82
PDAP1-202ENST00000426447 C11orf72Q8NBR9 251 aa9.92□□□□□ -0.82
PDAP1-202ENST00000426447 ST6GAL2Q96JF0 529 aa9.92□□□□□ -0.82
PDAP1-202ENST00000426447 C8orf49Q96NF6 230 aa9.92□□□□□ -0.82
PDAP1-202ENST00000426447 ODF3Q96PU9 254 aa9.92□□□□□ -0.82
PDAP1-202ENST00000426447 CCDC59Q9P031 241 aaKnown RBP9.92□□□□□ -0.82
PDAP1-202ENST00000426447 MGAT4CQ9UBM8 478 aa9.92□□□□□ -0.82
PDAP1-202ENST00000426447 C7orf71A4D174 169 aa9.91□□□□□ -0.82
PDAP1-202ENST00000426447 COX7A2P2O60397 106 aa9.91□□□□□ -0.82
PDAP1-202ENST00000426447 SPINK4O60575 86 aa9.91□□□□□ -0.82
PDAP1-202ENST00000426447 SFT2D2O95562 160 aa9.91□□□□□ -0.82
PDAP1-202ENST00000426447 CRYBA4P53673 196 aa9.91□□□□□ -0.82
PDAP1-202ENST00000426447 ID3Q02535 119 aa9.91□□□□□ -0.82
PDAP1-202ENST00000426447 OR10P1Q8NGE3 313 aa9.91□□□□□ -0.82
PDAP1-202ENST00000426447 E5RGE8 158 aa9.9□□□□□ -0.82
PDAP1-202ENST00000426447 CCNKO75909 580 aa9.9□□□□□ -0.82
PDAP1-202ENST00000426447 PLA2G1BP04054 148 aaKnown RBP9.9□□□□□ -0.82
PDAP1-202ENST00000426447 METTL15P1P0C7V9 234 aa9.9□□□□□ -0.82
PDAP1-202ENST00000426447 RNASE4P34096 147 aaKnown RBP9.9□□□□□ -0.82
PDAP1-202ENST00000426447 ANXA2RQ3ZCQ2 193 aa9.9□□□□□ -0.82
PDAP1-202ENST00000426447 SERTAD4-AS1Q5TG53 156 aa9.9□□□□□ -0.82
PDAP1-202ENST00000426447 ZNF546Q86UE3 836 aa9.9□□□□□ -0.82
PDAP1-202ENST00000426447 WFDC10BQ8IUB3 73 aa9.9□□□□□ -0.82
PDAP1-202ENST00000426447 SYT8Q8NBV8 401 aa9.9□□□□□ -0.82
PDAP1-202ENST00000426447 TRGV4A0A0C4DH28 118 aa9.89□□□□□ -0.83
PDAP1-202ENST00000426447 KRTAP29-1A8MX34 341 aaPredicted RBP9.89□□□□□ -0.83
PDAP1-202ENST00000426447 H3BQ15 152 aa9.89□□□□□ -0.83
PDAP1-202ENST00000426447 K7EPK0 472 aa9.89□□□□□ -0.83
PDAP1-202ENST00000426447 SSSCA1O60232 199 aa9.89□□□□□ -0.83
PDAP1-202ENST00000426447 MPDU1O75352 247 aa9.89□□□□□ -0.83
PDAP1-202ENST00000426447 CRYGDP07320 174 aa9.89□□□□□ -0.83
PDAP1-202ENST00000426447 SRIP30626 198 aa9.89□□□□□ -0.83
PDAP1-202ENST00000426447 TCL1AP56279 114 aa9.89□□□□□ -0.83
PDAP1-202ENST00000426447 PPP1R1AQ13522 171 aa9.89□□□□□ -0.83
PDAP1-202ENST00000426447 GUK1Q16774 197 aa9.89□□□□□ -0.83
PDAP1-202ENST00000426447 C10orf113Q5VZT2 155 aa9.89□□□□□ -0.83
PDAP1-202ENST00000426447 NTN5Q8WTR8 489 aaPredicted RBP9.89□□□□□ -0.83
PDAP1-202ENST00000426447 SAT2Q96F10 170 aaPredicted RBP9.89□□□□□ -0.83
PDAP1-202ENST00000426447 SMIM8Q96KF7 97 aa9.89□□□□□ -0.83
PDAP1-202ENST00000426447 MRPL16Q9NX20 251 aaKnown RBP9.89□□□□□ -0.83
PDAP1-202ENST00000426447 FABP12A6NFH5 140 aa9.88□□□□□ -0.83
PDAP1-202ENST00000426447 FNDC10F2Z333 226 aa9.88□□□□□ -0.83
PDAP1-202ENST00000426447 RGS13O14921 159 aa9.88□□□□□ -0.83
PDAP1-202ENST00000426447 AGPAT2O15120 278 aa9.88□□□□□ -0.83
PDAP1-202ENST00000426447 GPX1P07203 203 aa9.88□□□□□ -0.83
PDAP1-202ENST00000426447 IGLC2P0DOY2 106 aa9.88□□□□□ -0.83
PDAP1-202ENST00000426447 CD300CQ08708 224 aa9.88□□□□□ -0.83
PDAP1-202ENST00000426447 ERCC8Q13216 396 aa9.88□□□□□ -0.83
PDAP1-202ENST00000426447 BTN1A1Q13410 526 aa9.88□□□□□ -0.83
PDAP1-202ENST00000426447 FHL2Q14192 279 aa9.88□□□□□ -0.83
PDAP1-202ENST00000426447 OPCMLQ14982 345 aa9.88□□□□□ -0.83
PDAP1-202ENST00000426447 C4orf46Q504U0 113 aa9.88□□□□□ -0.83
PDAP1-202ENST00000426447 C10orf126Q8N4M7 172 aa9.88□□□□□ -0.83
PDAP1-202ENST00000426447 MCFD2Q8NI22 146 aa9.88□□□□□ -0.83
PDAP1-202ENST00000426447 PCNPQ8WW12 178 aaKnown RBP9.88□□□□□ -0.83
PDAP1-202ENST00000426447 TMEM37Q8WXS4 190 aa9.88□□□□□ -0.83
PDAP1-202ENST00000426447 MRPL32Q9BYC8 188 aaKnown RBP9.88□□□□□ -0.83
PDAP1-202ENST00000426447 AP3S2P59780 193 aa9.87□□□□□ -0.83
PDAP1-202ENST00000426447 ZNF415Q09FC8 603 aa9.87□□□□□ -0.83
PDAP1-202ENST00000426447 SPCS2Q15005 226 aa9.87□□□□□ -0.83
PDAP1-202ENST00000426447 IBA57Q5T440 356 aaKnown RBP9.87□□□□□ -0.83
PDAP1-202ENST00000426447 MORN5Q5VZ52 161 aa9.87□□□□□ -0.83
PDAP1-202ENST00000426447 DEFB104AQ8WTQ1 72 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms