RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 RETNQ9HD89 108 aa17.95■□□□□ 0.46
VEGFA-209ENST00000425836 GIG44P09565 113 aaPredicted RBP17.94■□□□□ 0.46
VEGFA-209ENST00000425836 MORN3Q6PF18 240 aaPredicted RBP17.94■□□□□ 0.46
VEGFA-209ENST00000425836 SLC51BQ86UW2 128 aa17.94■□□□□ 0.46
VEGFA-209ENST00000425836 OR8A1Q8NGG7 326 aa17.94■□□□□ 0.46
VEGFA-209ENST00000425836 TMED6Q8WW62 240 aa17.94■□□□□ 0.46
VEGFA-209ENST00000425836 CLUHP3Q96NS8 147 aa17.94■□□□□ 0.46
VEGFA-209ENST00000425836 CTXND1A0A1B0GTU2 59 aa17.93■□□□□ 0.46
VEGFA-209ENST00000425836 PRAC2D3DTV9 90 aa17.93■□□□□ 0.46
VEGFA-209ENST00000425836 M0R3E3 92 aa17.93■□□□□ 0.46
VEGFA-209ENST00000425836 CA1P00915 261 aaPredicted RBP17.93■□□□□ 0.46
VEGFA-209ENST00000425836 Q6ZWC4 215 aa17.93■□□□□ 0.46
VEGFA-209ENST00000425836 A8MTW9 85 aa17.92■□□□□ 0.46
VEGFA-209ENST00000425836 DUSP14O95147 198 aaKnown RBP17.92■□□□□ 0.46
VEGFA-209ENST00000425836 CXorf1O96002 111 aa17.92■□□□□ 0.46
VEGFA-209ENST00000425836 C4BPBP20851 252 aa17.92■□□□□ 0.46
VEGFA-209ENST00000425836 CNN1P51911 297 aaKnown RBP17.92■□□□□ 0.46
VEGFA-209ENST00000425836 RANP62826 216 aaKnown RBP17.92■□□□□ 0.46
VEGFA-209ENST00000425836 ICAM4Q14773 271 aa17.92■□□□□ 0.46
VEGFA-209ENST00000425836 MRPL53Q96EL3 112 aaKnown RBP17.92■□□□□ 0.46
VEGFA-209ENST00000425836 AAMDCQ9H7C9 122 aa17.92■□□□□ 0.46
VEGFA-209ENST00000425836 UMAD1C9J7I0 102 aa17.91■□□□□ 0.46
VEGFA-209ENST00000425836 GCHFRP30047 84 aa17.91■□□□□ 0.46
VEGFA-209ENST00000425836 FHITP49789 147 aa17.91■□□□□ 0.46
VEGFA-209ENST00000425836 LYPD1Q8N2G4 141 aa17.91■□□□□ 0.46
VEGFA-209ENST00000425836 PRELID1Q9Y255 219 aa17.91■□□□□ 0.46
VEGFA-209ENST00000425836 NUTF2P61970 127 aaKnown RBP17.91■□□□□ 0.46
VEGFA-209ENST00000425836 HIST1H1AQ02539 215 aaPredicted RBP17.91■□□□□ 0.46
VEGFA-209ENST00000425836 DEFB135Q30KP9 77 aa17.91■□□□□ 0.46
VEGFA-209ENST00000425836 SUN5Q8TC36 379 aa17.91■□□□□ 0.46
VEGFA-209ENST00000425836 OVOL2Q9BRP0 275 aa17.91■□□□□ 0.46
VEGFA-209ENST00000425836 AGRNO00468 2067 aa17.9■□□□□ 0.46
VEGFA-209ENST00000425836 RCHY1Q96PM5 261 aa17.9■□□□□ 0.46
VEGFA-209ENST00000425836 Q9H3A6 140 aa17.9■□□□□ 0.46
VEGFA-209ENST00000425836 U3KQK5 164 aa17.9■□□□□ 0.46
VEGFA-209ENST00000425836 AMTNQ6UX39 209 aa17.89■□□□□ 0.45
VEGFA-209ENST00000425836 RNF183Q96D59 192 aa17.89■□□□□ 0.45
VEGFA-209ENST00000425836 SLC35B3Q9H1N7 401 aa17.89■□□□□ 0.45
VEGFA-209ENST00000425836 FXYD7P58549 80 aa17.88■□□□□ 0.45
VEGFA-209ENST00000425836 EIF5AL1Q6IS14 154 aaKnown RBP17.88■□□□□ 0.45
VEGFA-209ENST00000425836 TP53TG1Q9Y2A0 90 aa17.88■□□□□ 0.45
VEGFA-209ENST00000425836 SPRY2O43597 315 aa17.87■□□□□ 0.45
VEGFA-209ENST00000425836 OR10J6PQ8NGY7 276 aa17.87■□□□□ 0.45
VEGFA-209ENST00000425836 FAM213BQ8TBF2 198 aa17.87■□□□□ 0.45
VEGFA-209ENST00000425836 TMEM167BQ9NRX6 74 aa17.87■□□□□ 0.45
VEGFA-209ENST00000425836 BOLA1Q9Y3E2 137 aa17.87■□□□□ 0.45
VEGFA-209ENST00000425836 MAP1LC3B2A6NCE7 125 aa17.87■□□□□ 0.45
VEGFA-209ENST00000425836 FGF8P55075 233 aaPredicted RBP17.87■□□□□ 0.45
VEGFA-209ENST00000425836 DPPA3Q6W0C5 159 aa17.87■□□□□ 0.45
VEGFA-209ENST00000425836 MAP1LC3BQ9GZQ8 125 aa17.87■□□□□ 0.45
VEGFA-209ENST00000425836 OTORQ9NRC9 128 aa17.87■□□□□ 0.45
VEGFA-209ENST00000425836 XCL2Q9UBD3 114 aa17.87■□□□□ 0.45
VEGFA-209ENST00000425836 IQCF2Q8IXL9 164 aa17.86■□□□□ 0.45
VEGFA-209ENST00000425836 TMPRSS5Q9H3S3 457 aa17.86■□□□□ 0.45
VEGFA-209ENST00000425836 COL7A1Q02388 2944 aa17.86■□□□□ 0.45
VEGFA-209ENST00000425836 PGPA6NDG6 321 aa17.85■□□□□ 0.45
VEGFA-209ENST00000425836 CSNK1G2-AS1Q8NCQ2 148 aa17.85■□□□□ 0.45
VEGFA-209ENST00000425836 MBD3L1Q8WWY6 194 aa17.85■□□□□ 0.45
VEGFA-209ENST00000425836 TGP01266 2768 aa17.85■□□□□ 0.45
VEGFA-209ENST00000425836 C1QTNF4Q9BXJ3 329 aa17.84■□□□□ 0.45
VEGFA-209ENST00000425836 NPIPB6E9PJ23 425 aa17.83■□□□□ 0.45
VEGFA-209ENST00000425836 RAB5CP51148 216 aa17.83■□□□□ 0.45
VEGFA-209ENST00000425836 SFT2D1Q8WV19 159 aa17.83■□□□□ 0.45
VEGFA-209ENST00000425836 NBEAL2Q6ZNJ1 2754 aa17.83■□□□□ 0.44
VEGFA-209ENST00000425836 CSN1S1P47710 185 aa17.83■□□□□ 0.44
VEGFA-209ENST00000425836 SULT1A2P50226 295 aa17.83■□□□□ 0.44
VEGFA-209ENST00000425836 ERCC8Q13216 396 aa17.83■□□□□ 0.44
VEGFA-209ENST00000425836 RXFP4Q8TDU9 374 aa17.83■□□□□ 0.44
VEGFA-209ENST00000425836 PPP1R14DQ9NXH3 145 aa17.83■□□□□ 0.44
VEGFA-209ENST00000425836 IGKV2-40A0A087WW87 121 aaPredicted RBP17.82■□□□□ 0.44
VEGFA-209ENST00000425836 M0R2Z0 102 aa17.82■□□□□ 0.44
VEGFA-209ENST00000425836 IGKV2D-40P01614 121 aaPredicted RBP17.82■□□□□ 0.44
VEGFA-209ENST00000425836 SPINK13Q1W4C9 94 aa17.82■□□□□ 0.44
VEGFA-209ENST00000425836 FAM74A1Q5RGS3 127 aa17.82■□□□□ 0.44
VEGFA-209ENST00000425836 BOLA2-SMG1P6H3BVE0 249 aa17.81■□□□□ 0.44
VEGFA-209ENST00000425836 CT45A10P0DMU9 189 aa17.81■□□□□ 0.44
VEGFA-209ENST00000425836 AGPAT4-IT1Q9H0P7 198 aa17.81■□□□□ 0.44
VEGFA-209ENST00000425836 DIRC3C9JPN6 131 aa17.8■□□□□ 0.44
VEGFA-209ENST00000425836 H2AFB1P0C5Y9 115 aa17.8■□□□□ 0.44
VEGFA-209ENST00000425836 CMTM2Q8TAZ6 248 aa17.8■□□□□ 0.44
VEGFA-209ENST00000425836 VGLL1Q99990 258 aa17.8■□□□□ 0.44
VEGFA-209ENST00000425836 A0A1W2PRE2 83 aa17.79■□□□□ 0.44
VEGFA-209ENST00000425836 CRXO43186 299 aaPredicted RBP17.79■□□□□ 0.44
VEGFA-209ENST00000425836 AMBPP02760 352 aa17.79■□□□□ 0.44
VEGFA-209ENST00000425836 C9orf47Q6ZRZ4 202 aa17.79■□□□□ 0.44
VEGFA-209ENST00000425836 OR11H2Q8NH07 326 aa17.79■□□□□ 0.44
VEGFA-209ENST00000425836 LINC00477Q96M19 166 aa17.79■□□□□ 0.44
VEGFA-209ENST00000425836 RARRES2Q99969 163 aa17.79■□□□□ 0.44
VEGFA-209ENST00000425836 GGTLC3B5MD39 225 aa17.79■□□□□ 0.44
VEGFA-209ENST00000425836 SUMO1P63165 101 aaKnown RBP17.79■□□□□ 0.44
VEGFA-209ENST00000425836 ARL6IP6Q8N6S5 226 aa17.79■□□□□ 0.44
VEGFA-209ENST00000425836 YTHDF2Q9Y5A9 579 aaKnown RBP17.79■□□□□ 0.44
VEGFA-209ENST00000425836 A0A1B0GV50 99 aa17.78■□□□□ 0.44
VEGFA-209ENST00000425836 SLC25A5P05141 298 aaKnown RBP17.78■□□□□ 0.44
VEGFA-209ENST00000425836 UBE2G2P60604 165 aa17.78■□□□□ 0.44
VEGFA-209ENST00000425836 ODF3Q96PU9 254 aa17.78■□□□□ 0.44
VEGFA-209ENST00000425836 RPH3ALQ9UNE2 315 aa17.78■□□□□ 0.44
VEGFA-209ENST00000425836 TRAV12-2A0A075B6T6 113 aa17.77■□□□□ 0.44
VEGFA-209ENST00000425836 RBAKDNA6NC62 111 aa17.77■□□□□ 0.44
VEGFA-209ENST00000425836 CDKN1BP46527 198 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms