RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 AZU1P20160 251 aa13.05□□□□□ -0.32
SMARCAL1-205ENST00000425815 CLINT1Q14677 625 aa13.05□□□□□ -0.32
SMARCAL1-205ENST00000425815 KIR3DS1Q14943 382 aa13.05□□□□□ -0.32
SMARCAL1-205ENST00000425815 TRBV19A0A075B6N1 114 aa13.04□□□□□ -0.32
SMARCAL1-205ENST00000425815 PLAC8L1A1L4L8 177 aa13.04□□□□□ -0.32
SMARCAL1-205ENST00000425815 NDUFB4O95168 129 aa13.04□□□□□ -0.32
SMARCAL1-205ENST00000425815 GUK1Q16774 197 aa13.04□□□□□ -0.32
SMARCAL1-205ENST00000425815 NIPSNAP3BQ9BS92 247 aa13.04□□□□□ -0.32
SMARCAL1-205ENST00000425815 TMEM208Q9BTX3 173 aa13.04□□□□□ -0.32
SMARCAL1-205ENST00000425815 PARD6GQ9BYG4 376 aaPredicted RBP13.04□□□□□ -0.32
SMARCAL1-205ENST00000425815 WDR61Q9GZS3 305 aaKnown RBP13.04□□□□□ -0.32
SMARCAL1-205ENST00000425815 TMEM14CQ9P0S9 112 aa13.04□□□□□ -0.32
SMARCAL1-205ENST00000425815 DNAH6Q9C0G6 4158 aa13.03□□□□□ -0.32
SMARCAL1-205ENST00000425815 PYYP10082 97 aa13.03□□□□□ -0.32
SMARCAL1-205ENST00000425815 FAM167A-AS1Q96KT0 104 aa13.03□□□□□ -0.32
SMARCAL1-205ENST00000425815 SLC25A2Q9BXI2 301 aa13.03□□□□□ -0.32
SMARCAL1-205ENST00000425815 ZNF253O75346 499 aa13.02□□□□□ -0.33
SMARCAL1-205ENST00000425815 HIST1H1EP10412 219 aaKnown RBP13.02□□□□□ -0.33
SMARCAL1-205ENST00000425815 CDKN1BP46527 198 aa13.02□□□□□ -0.33
SMARCAL1-205ENST00000425815 OXA1LQ15070 435 aa13.02□□□□□ -0.33
SMARCAL1-205ENST00000425815 MIR17HGQ75NE6 70 aa13.02□□□□□ -0.33
SMARCAL1-205ENST00000425815 CT45A10P0DMU9 189 aa13.01□□□□□ -0.33
SMARCAL1-205ENST00000425815 TSPOP30536 169 aa13.01□□□□□ -0.33
SMARCAL1-205ENST00000425815 LINC01587Q99440 93 aa13.01□□□□□ -0.33
SMARCAL1-205ENST00000425815 PPP1R14DQ9NXH3 145 aa13.01□□□□□ -0.33
SMARCAL1-205ENST00000425815 HSPB11Q9Y547 144 aa13.01□□□□□ -0.33
SMARCAL1-205ENST00000425815 ALG5Q9Y673 324 aa13.01□□□□□ -0.33
SMARCAL1-205ENST00000425815 FRAS1Q86XX4 4008 aa13.01□□□□□ -0.33
SMARCAL1-205ENST00000425815 TEX48A0A1B0GUV7 120 aa13□□□□□ -0.33
SMARCAL1-205ENST00000425815 M0R3E3 92 aa13□□□□□ -0.33
SMARCAL1-205ENST00000425815 OR10J6PQ8NGY7 276 aa13□□□□□ -0.33
SMARCAL1-205ENST00000425815 ATP5SQ99766 215 aa13□□□□□ -0.33
SMARCAL1-205ENST00000425815 WFDC1Q9HC57 220 aa13□□□□□ -0.33
SMARCAL1-205ENST00000425815 MBD2Q9UBB5 411 aa13□□□□□ -0.33
SMARCAL1-205ENST00000425815 NPIPB6E9PJ23 425 aa12.99□□□□□ -0.33
SMARCAL1-205ENST00000425815 RPL12P30050 165 aaKnown RBP12.99□□□□□ -0.33
SMARCAL1-205ENST00000425815 TAS2R60P59551 318 aa12.99□□□□□ -0.33
SMARCAL1-205ENST00000425815 FCN2Q15485 313 aa12.99□□□□□ -0.33
SMARCAL1-205ENST00000425815 MRPL53Q96EL3 112 aaKnown RBP12.99□□□□□ -0.33
SMARCAL1-205ENST00000425815 ERCC8Q13216 396 aa12.98□□□□□ -0.33
SMARCAL1-205ENST00000425815 GFI1BQ5VTD9 330 aa12.98□□□□□ -0.33
SMARCAL1-205ENST00000425815 TMEM256Q8N2U0 113 aa12.98□□□□□ -0.33
SMARCAL1-205ENST00000425815 EXOC3-AS1Q8N2X6 119 aa12.98□□□□□ -0.33
SMARCAL1-205ENST00000425815 BLNKQ8WV28 456 aa12.98□□□□□ -0.33
SMARCAL1-205ENST00000425815 NDUFAF3Q9BU61 184 aa12.98□□□□□ -0.33
SMARCAL1-205ENST00000425815 SMIM3Q9BZL3 60 aa12.98□□□□□ -0.33
SMARCAL1-205ENST00000425815 PTTG1O95997 202 aa12.97□□□□□ -0.33
SMARCAL1-205ENST00000425815 PET100P0DJ07 73 aa12.97□□□□□ -0.33
SMARCAL1-205ENST00000425815 PDE6HQ13956 83 aa12.97□□□□□ -0.33
SMARCAL1-205ENST00000425815 ZNF503Q96F45 646 aa12.97□□□□□ -0.33
SMARCAL1-205ENST00000425815 OR51M1Q9H341 326 aa12.97□□□□□ -0.33
SMARCAL1-205ENST00000425815 TIMM9Q9Y5J7 89 aa12.97□□□□□ -0.33
SMARCAL1-205ENST00000425815 DNAH2Q9P225 4427 aa12.96□□□□□ -0.33
SMARCAL1-205ENST00000425815 LYRM9A8MSI8 78 aa12.96□□□□□ -0.33
SMARCAL1-205ENST00000425815 NBEAP1P0C6P0 100 aa12.96□□□□□ -0.33
SMARCAL1-205ENST00000425815 HTN1P15515 57 aa12.96□□□□□ -0.33
SMARCAL1-205ENST00000425815 DAD1P61803 113 aa12.96□□□□□ -0.33
SMARCAL1-205ENST00000425815 FXYD5Q96DB9 178 aa12.96□□□□□ -0.33
SMARCAL1-205ENST00000425815 FAM19A4Q96LR4 140 aa12.96□□□□□ -0.33
SMARCAL1-205ENST00000425815 ODF3Q96PU9 254 aa12.96□□□□□ -0.33
SMARCAL1-205ENST00000425815 AGPAT4-IT1Q9H0P7 198 aa12.96□□□□□ -0.33
SMARCAL1-205ENST00000425815 FUT9Q9Y231 359 aa12.96□□□□□ -0.33
SMARCAL1-205ENST00000425815 C17orf112F2Z3M2 114 aa12.95□□□□□ -0.34
SMARCAL1-205ENST00000425815 H7BYZ3 331 aa12.95□□□□□ -0.34
SMARCAL1-205ENST00000425815 HTN3P15516 51 aa12.95□□□□□ -0.34
SMARCAL1-205ENST00000425815 RNASE8Q8TDE3 154 aaKnown RBP12.95□□□□□ -0.34
SMARCAL1-205ENST00000425815 FAM210BQ96KR6 192 aa12.95□□□□□ -0.34
SMARCAL1-205ENST00000425815 C20orf144Q9BQM9 153 aa12.95□□□□□ -0.34
SMARCAL1-205ENST00000425815 MRPL32Q9BYC8 188 aaKnown RBP12.95□□□□□ -0.34
SMARCAL1-205ENST00000425815 PRELID1Q9Y255 219 aa12.95□□□□□ -0.34
SMARCAL1-205ENST00000425815 J3KRW8 73 aa12.94□□□□□ -0.34
SMARCAL1-205ENST00000425815 DEFB130BP0DP73 79 aa12.94□□□□□ -0.34
SMARCAL1-205ENST00000425815 DEFB130AP0DP74 79 aa12.94□□□□□ -0.34
SMARCAL1-205ENST00000425815 ICAM4Q14773 271 aa12.94□□□□□ -0.34
SMARCAL1-205ENST00000425815 FFAR4Q5NUL3 377 aa12.94□□□□□ -0.34
SMARCAL1-205ENST00000425815 RNF141Q8WVD5 230 aa12.94□□□□□ -0.34
SMARCAL1-205ENST00000425815 PAXXQ9BUH6 204 aa12.94□□□□□ -0.34
SMARCAL1-205ENST00000425815 KCNIP2Q9NS61 270 aa12.94□□□□□ -0.34
SMARCAL1-205ENST00000425815 IFNA5P01569 189 aa12.93□□□□□ -0.34
SMARCAL1-205ENST00000425815 OR10J4P0C629 311 aa12.93□□□□□ -0.34
SMARCAL1-205ENST00000425815 Q5BKY6 102 aa12.93□□□□□ -0.34
SMARCAL1-205ENST00000425815 C16orf74Q96GX8 76 aa12.93□□□□□ -0.34
SMARCAL1-205ENST00000425815 LINC00477Q96M19 166 aa12.93□□□□□ -0.34
SMARCAL1-205ENST00000425815 TRAV12-3A0A0B4J271 114 aa12.92□□□□□ -0.34
SMARCAL1-205ENST00000425815 EIF3GO75821 320 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMARCAL1-205ENST00000425815 LEPP41159 167 aa12.92□□□□□ -0.34
SMARCAL1-205ENST00000425815 FAM122CQ6P4D5 195 aa12.92□□□□□ -0.34
SMARCAL1-205ENST00000425815 TMEM88Q6PEY1 159 aa12.92□□□□□ -0.34
SMARCAL1-205ENST00000425815 ZNF493Q6ZR52 646 aa12.92□□□□□ -0.34
SMARCAL1-205ENST00000425815 C9orf47Q6ZRZ4 202 aa12.92□□□□□ -0.34
SMARCAL1-205ENST00000425815 POM121L12Q8N7R1 296 aa12.92□□□□□ -0.34
SMARCAL1-205ENST00000425815 SCGB1C1Q8TD33 95 aa12.92□□□□□ -0.34
SMARCAL1-205ENST00000425815 PHYHIPLQ96FC7 376 aa12.92□□□□□ -0.34
SMARCAL1-205ENST00000425815 VGLL1Q99990 258 aa12.92□□□□□ -0.34
SMARCAL1-205ENST00000425815 NOP10Q9NPE3 64 aaKnown RBP12.92□□□□□ -0.34
SMARCAL1-205ENST00000425815 TIMM8BQ9Y5J9 83 aaPredicted RBP12.92□□□□□ -0.34
SMARCAL1-205ENST00000425815 DNAH17Q9UFH2 4485 aa12.91□□□□□ -0.34
SMARCAL1-205ENST00000425815 IGKV2-40A0A087WW87 121 aaPredicted RBP12.91□□□□□ -0.34
SMARCAL1-205ENST00000425815 KLLNB2CW77 178 aa12.91□□□□□ -0.34
SMARCAL1-205ENST00000425815 ZNF324O75467 553 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms