RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 PDE6HQ13956 83 aa16.08■□□□□ 0.16
PTCHD3P2-201ENST00000424937 OR51M1Q9H341 326 aa16.08■□□□□ 0.16
PTCHD3P2-201ENST00000424937 CELA1Q9UNI1 258 aa16.08■□□□□ 0.16
PTCHD3P2-201ENST00000424937 KLK5Q9Y337 293 aaPredicted RBP16.08■□□□□ 0.16
PTCHD3P2-201ENST00000424937 SACSQ9NZJ4 4579 aa16.07■□□□□ 0.16
PTCHD3P2-201ENST00000424937 TRAV12-2A0A075B6T6 113 aa16.07■□□□□ 0.16
PTCHD3P2-201ENST00000424937 OR7C2O60412 319 aa16.07■□□□□ 0.16
PTCHD3P2-201ENST00000424937 NDUFB4O95168 129 aa16.07■□□□□ 0.16
PTCHD3P2-201ENST00000424937 HBE1P02100 147 aa16.07■□□□□ 0.16
PTCHD3P2-201ENST00000424937 ZNF266Q14584 549 aa16.07■□□□□ 0.16
PTCHD3P2-201ENST00000424937 OR2T35Q8NGX2 323 aa16.07■□□□□ 0.16
PTCHD3P2-201ENST00000424937 PAXXQ9BUH6 204 aa16.07■□□□□ 0.16
PTCHD3P2-201ENST00000424937 OR10J4P0C629 311 aa16.06■□□□□ 0.16
PTCHD3P2-201ENST00000424937 EMP1P54849 157 aa16.06■□□□□ 0.16
PTCHD3P2-201ENST00000424937 ALMS1Q8TCU4 4167 aa16.05■□□□□ 0.16
PTCHD3P2-201ENST00000424937 M0R3E3 92 aa16.05■□□□□ 0.16
PTCHD3P2-201ENST00000424937 PLECQ15149 4684 aaKnown RBP16.05■□□□□ 0.16
PTCHD3P2-201ENST00000424937 EXOC3-AS1Q8N2X6 119 aa16.05■□□□□ 0.16
PTCHD3P2-201ENST00000424937 HSD17B11Q8NBQ5 300 aa16.05■□□□□ 0.16
PTCHD3P2-201ENST00000424937 INO80EQ8NBZ0 244 aaPredicted RBP16.05■□□□□ 0.16
PTCHD3P2-201ENST00000424937 MRPL53Q96EL3 112 aaKnown RBP16.05■□□□□ 0.16
PTCHD3P2-201ENST00000424937 AAMDCQ9H7C9 122 aa16.05■□□□□ 0.16
PTCHD3P2-201ENST00000424937 TMEM189A5PLL7 270 aa16.04■□□□□ 0.16
PTCHD3P2-201ENST00000424937 NBEAP1P0C6P0 100 aa16.04■□□□□ 0.16
PTCHD3P2-201ENST00000424937 CDKN1BP46527 198 aa16.04■□□□□ 0.16
PTCHD3P2-201ENST00000424937 UBE2L3P68036 154 aaKnown RBP16.04■□□□□ 0.16
PTCHD3P2-201ENST00000424937 RRN3P1Q2M238 152 aa16.04■□□□□ 0.16
PTCHD3P2-201ENST00000424937 ACOT6Q3I5F7 207 aaPredicted RBP16.04■□□□□ 0.16
PTCHD3P2-201ENST00000424937 KHDC3LQ587J8 217 aa16.04■□□□□ 0.16
PTCHD3P2-201ENST00000424937 RNF141Q8WVD5 230 aa16.04■□□□□ 0.16
PTCHD3P2-201ENST00000424937 FXYD5Q96DB9 178 aa16.04■□□□□ 0.16
PTCHD3P2-201ENST00000424937 PRELID1Q9Y255 219 aa16.04■□□□□ 0.16
PTCHD3P2-201ENST00000424937 LOC102723971A0A1B0GUV8 181 aa16.03■□□□□ 0.16
PTCHD3P2-201ENST00000424937 M6PRP20645 277 aa16.03■□□□□ 0.16
PTCHD3P2-201ENST00000424937 TAS2R45P59539 299 aa16.03■□□□□ 0.16
PTCHD3P2-201ENST00000424937 RAB2AP61019 212 aa16.03■□□□□ 0.16
PTCHD3P2-201ENST00000424937 Q6ZTC4 211 aa16.03■□□□□ 0.16
PTCHD3P2-201ENST00000424937 ZNF767PQ75MW2 155 aa16.03■□□□□ 0.16
PTCHD3P2-201ENST00000424937 RPP25LQ8N5L8 163 aaKnown RBP16.03■□□□□ 0.16
PTCHD3P2-201ENST00000424937 PHYHIPLQ96FC7 376 aa16.03■□□□□ 0.16
PTCHD3P2-201ENST00000424937 TNFSF18Q9UNG2 199 aa16.03■□□□□ 0.16
PTCHD3P2-201ENST00000424937 RYR2Q92736 4967 aa16.03■□□□□ 0.16
PTCHD3P2-201ENST00000424937 RNF222A6NCQ9 220 aa16.02■□□□□ 0.16
PTCHD3P2-201ENST00000424937 NPIPB6E9PJ23 425 aa16.02■□□□□ 0.16
PTCHD3P2-201ENST00000424937 EIF3GO75821 320 aaKnown RBP eCLIP16.02■□□□□ 0.16
PTCHD3P2-201ENST00000424937 ICAM4Q14773 271 aa16.02■□□□□ 0.16
PTCHD3P2-201ENST00000424937 ZNF503Q96F45 646 aa16.02■□□□□ 0.16
PTCHD3P2-201ENST00000424937 ZNF705GA8MUZ8 300 aaPredicted RBP16.01■□□□□ 0.15
PTCHD3P2-201ENST00000424937 C11orf94C9JXX5 98 aa16.01■□□□□ 0.15
PTCHD3P2-201ENST00000424937 G3V3Q6 166 aa16.01■□□□□ 0.15
PTCHD3P2-201ENST00000424937 TSPOP30536 169 aa16.01■□□□□ 0.15
PTCHD3P2-201ENST00000424937 FAM122CQ6P4D5 195 aa16.01■□□□□ 0.15
PTCHD3P2-201ENST00000424937 A0A1W2PPV4 95 aa16■□□□□ 0.15
PTCHD3P2-201ENST00000424937 CT45A10P0DMU9 189 aa16■□□□□ 0.15
PTCHD3P2-201ENST00000424937 ATP6V0CP27449 155 aa16■□□□□ 0.15
PTCHD3P2-201ENST00000424937 C12orf74Q32Q52 190 aa16■□□□□ 0.15
PTCHD3P2-201ENST00000424937 C2CD4CQ8TF44 421 aa16■□□□□ 0.15
PTCHD3P2-201ENST00000424937 YTHDF2Q9Y5A9 579 aaKnown RBP16■□□□□ 0.15
PTCHD3P2-201ENST00000424937 TRAV10A0A0B4J240 114 aa15.99■□□□□ 0.15
PTCHD3P2-201ENST00000424937 J3KRW8 73 aa15.99■□□□□ 0.15
PTCHD3P2-201ENST00000424937 PRM2P04554 102 aa15.99■□□□□ 0.15
PTCHD3P2-201ENST00000424937 SPART-AS1P0CW21 52 aa15.99■□□□□ 0.15
PTCHD3P2-201ENST00000424937 LEPP41159 167 aa15.99■□□□□ 0.15
PTCHD3P2-201ENST00000424937 ERCC8Q13216 396 aa15.99■□□□□ 0.15
PTCHD3P2-201ENST00000424937 KIR3DS1Q14943 382 aa15.99■□□□□ 0.15
PTCHD3P2-201ENST00000424937 TMEM256Q8N2U0 113 aa15.99■□□□□ 0.15
PTCHD3P2-201ENST00000424937 OR10G4Q8NGN3 311 aa15.99■□□□□ 0.15
PTCHD3P2-201ENST00000424937 OR10G9Q8NGN4 311 aa15.99■□□□□ 0.15
PTCHD3P2-201ENST00000424937 OR10G7Q8NGN6 311 aa15.99■□□□□ 0.15
PTCHD3P2-201ENST00000424937 OR2G3Q8NGZ4 309 aa15.99■□□□□ 0.15
PTCHD3P2-201ENST00000424937 ODF3Q96PU9 254 aa15.99■□□□□ 0.15
PTCHD3P2-201ENST00000424937 LINC01587Q99440 93 aa15.99■□□□□ 0.15
PTCHD3P2-201ENST00000424937 PSMG3Q9BT73 122 aaPredicted RBP15.99■□□□□ 0.15
PTCHD3P2-201ENST00000424937 IGKV2-40A0A087WW87 121 aaPredicted RBP15.98■□□□□ 0.15
PTCHD3P2-201ENST00000424937 SMLR1H3BR10 107 aa15.98■□□□□ 0.15
PTCHD3P2-201ENST00000424937 IGKV2D-40P01614 121 aaPredicted RBP15.98■□□□□ 0.15
PTCHD3P2-201ENST00000424937 FAM222AQ5U5X8 452 aa15.98■□□□□ 0.15
PTCHD3P2-201ENST00000424937 GFI1BQ5VTD9 330 aa15.98■□□□□ 0.15
PTCHD3P2-201ENST00000424937 SH3BGRL3Q9H299 93 aa15.98■□□□□ 0.15
PTCHD3P2-201ENST00000424937 DKK2Q9UBU2 259 aa15.98■□□□□ 0.15
PTCHD3P2-201ENST00000424937 DNAH1Q9P2D7 4330 aa15.98■□□□□ 0.15
PTCHD3P2-201ENST00000424937 TEX48A0A1B0GUV7 120 aa15.97■□□□□ 0.15
PTCHD3P2-201ENST00000424937 HMGB3O15347 200 aaKnown RBP15.97■□□□□ 0.15
PTCHD3P2-201ENST00000424937 ARPC5O15511 151 aa15.97■□□□□ 0.15
PTCHD3P2-201ENST00000424937 RANP62826 216 aaKnown RBP15.97■□□□□ 0.15
PTCHD3P2-201ENST00000424937 RPL7L1Q6DKI1 246 aaKnown RBP15.97■□□□□ 0.15
PTCHD3P2-201ENST00000424937 LINC00476Q8WZB0 136 aa15.97■□□□□ 0.15
PTCHD3P2-201ENST00000424937 Q9H3A6 140 aa15.97■□□□□ 0.15
PTCHD3P2-201ENST00000424937 BORCS7-ASMTA0A0B4J1R7 106 aa15.96■□□□□ 0.15
PTCHD3P2-201ENST00000424937 HTN1P15515 57 aa15.96■□□□□ 0.15
PTCHD3P2-201ENST00000424937 CDC34P49427 236 aaPredicted RBP15.96■□□□□ 0.15
PTCHD3P2-201ENST00000424937 IGLL5B9A064 214 aa15.95■□□□□ 0.14
PTCHD3P2-201ENST00000424937 TAS2R60P59551 318 aa15.95■□□□□ 0.14
PTCHD3P2-201ENST00000424937 PQLC2Q6ZP29 291 aa15.95■□□□□ 0.14
PTCHD3P2-201ENST00000424937 C20orf144Q9BQM9 153 aa15.95■□□□□ 0.14
PTCHD3P2-201ENST00000424937 NIPSNAP3BQ9BS92 247 aa15.95■□□□□ 0.14
PTCHD3P2-201ENST00000424937 AGPAT4-IT1Q9H0P7 198 aa15.95■□□□□ 0.14
PTCHD3P2-201ENST00000424937 H7BYZ3 331 aa15.94■□□□□ 0.14
PTCHD3P2-201ENST00000424937 LY6G6CO95867 125 aa15.94■□□□□ 0.14
PTCHD3P2-201ENST00000424937 AZU1P20160 251 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms