RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 RPL35P42766 123 aaKnown RBP5.31□□□□□ -1.56
EPHA4-206ENST00000424339 GALR1P47211 349 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 TAS2R45P59539 299 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 RHOBP62745 196 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 S100A12P80511 92 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 TMEM41BQ5BJD5 291 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 MIC13Q5XKP0 118 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 FAM90A2PQ658T7 463 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 HIST2H2BDQ6DRA6 164 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 RBPMS2Q6ZRY4 209 aaKnown RBP5.31□□□□□ -1.56
EPHA4-206ENST00000424339 OR8I2Q8N0Y5 310 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 CYB561D1Q8N8Q1 229 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 ISOC2Q96AB3 205 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 TVP23CQ96ET8 276 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 ZNF414Q96IQ9 312 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 C12orf57Q99622 126 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 SPAG8Q99932 426 aaPredicted RBP5.31□□□□□ -1.56
EPHA4-206ENST00000424339 SHANK2-AS3Q9BTD1 123 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 RHPN1-AS1Q9BWJ2 59 aa5.31□□□□□ -1.56
EPHA4-206ENST00000424339 A0A1W2PPV4 95 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 B4DEV8 164 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 H3BRN7 92 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 EIF3GO75821 320 aaKnown RBP eCLIP5.3□□□□□ -1.56
EPHA4-206ENST00000424339 GATA2P23769 480 aaPredicted RBP5.3□□□□□ -1.56
EPHA4-206ENST00000424339 AKR1D1P51857 326 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 CMC4P56277 68 aaPredicted RBP5.3□□□□□ -1.56
EPHA4-206ENST00000424339 EGFEM1PQ0D2K5 195 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 PNRC1Q12796 327 aaPredicted RBP5.3□□□□□ -1.56
EPHA4-206ENST00000424339 DEFB114Q30KQ6 69 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 FFAR4Q5NUL3 377 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 C16orf54Q6UWD8 224 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 SIGLEC15Q6ZMC9 328 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 SSX7Q7RTT5 188 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 LINC00305Q7Z4B0 112 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 BPIFA4PQ86YQ2 179 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 FAM24BQ8N5W8 94 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 GLMPQ8WWB7 406 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 FAM110AQ9BQ89 295 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 NIPSNAP3BQ9BS92 247 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 SLC25A39Q9BZJ4 359 aaPredicted RBP5.3□□□□□ -1.56
EPHA4-206ENST00000424339 SEPSECSQ9HD40 501 aaKnown RBP5.3□□□□□ -1.56
EPHA4-206ENST00000424339 CLEC5AQ9NY25 188 aa5.3□□□□□ -1.56
EPHA4-206ENST00000424339 IGHV3OR16-8A0A075B7F1 116 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 MAP1LC3B2A6NCE7 125 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 OR4C46A6NHA9 309 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 ZNF207O43670 478 aaKnown RBP5.29□□□□□ -1.56
EPHA4-206ENST00000424339 IFNA1P01562 189 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 IGLL1P15814 213 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 TAGLN2P37802 199 aaKnown RBP5.29□□□□□ -1.56
EPHA4-206ENST00000424339 SNRPEP62304 92 aaKnown RBP5.29□□□□□ -1.56
EPHA4-206ENST00000424339 CTAG1AP78358 180 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 PDE6HQ13956 83 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 ELOBQ15370 118 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 FAM78BQ5VT40 261 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 ADAMTSL5Q6ZMM2 481 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 PQLC2Q6ZP29 291 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 TCF24Q7RTU0 167 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 TMEM37Q8WXS4 190 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 RAB24Q969Q5 203 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 TCEAL7Q9BRU2 100 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 ACTR3CQ9C0K3 210 aaPredicted RBP5.29□□□□□ -1.56
EPHA4-206ENST00000424339 MAP1LC3BQ9GZQ8 125 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 NRN1Q9NPD7 142 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 TMEM242Q9NWH2 141 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 TMEM14CQ9P0S9 112 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 DOK5Q9P104 306 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 GNG13Q9P2W3 67 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 VAX2Q9UIW0 290 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 FUT9Q9Y231 359 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 NOTCH3Q9UM47 2321 aa5.29□□□□□ -1.56
EPHA4-206ENST00000424339 SORL1Q92673 2214 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 A0A087X0K7 114 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 CTXND1A0A1B0GTU2 59 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 ZNF727A8MUV8 499 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 ZNF253O75346 499 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 S100A6P06703 90 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 CDC34P49427 236 aaPredicted RBP5.28□□□□□ -1.56
EPHA4-206ENST00000424339 CD300EQ496F6 205 aaPredicted RBP5.28□□□□□ -1.56
EPHA4-206ENST00000424339 KPRPQ5T749 579 aaPredicted RBP5.28□□□□□ -1.56
EPHA4-206ENST00000424339 LCN15Q6UWW0 184 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 PATE2Q6UY27 113 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 GTSCR1Q86UQ5 136 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 TMEM61Q8N0U2 210 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 RPP25LQ8N5L8 163 aaKnown RBP5.28□□□□□ -1.56
EPHA4-206ENST00000424339 OR10G9Q8NGN4 311 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 OR10G7Q8NGN6 311 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 UHRF2Q96PU4 802 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 SLC50A1Q9BRV3 221 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 SLC25A22Q9H936 323 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 SDF2L1Q9HCN8 221 aa5.28□□□□□ -1.56
EPHA4-206ENST00000424339 ZNF256Q9Y2P7 627 aaPredicted RBP5.28□□□□□ -1.56
EPHA4-206ENST00000424339 IGHV3-49A0A0A0MS15 119 aa5.27□□□□□ -1.57
EPHA4-206ENST00000424339 TMEM250H0YL14 139 aa5.27□□□□□ -1.57
EPHA4-206ENST00000424339 ISLRO14498 428 aa5.27□□□□□ -1.57
EPHA4-206ENST00000424339 APOHP02749 345 aaPredicted RBP5.27□□□□□ -1.57
EPHA4-206ENST00000424339 CXCL1P09341 107 aa5.27□□□□□ -1.57
EPHA4-206ENST00000424339 HIST1H1EP10412 219 aaKnown RBP5.27□□□□□ -1.57
EPHA4-206ENST00000424339 ID1P41134 155 aa5.27□□□□□ -1.57
EPHA4-206ENST00000424339 PSMB3P49720 205 aa5.27□□□□□ -1.57
EPHA4-206ENST00000424339 FGF8P55075 233 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms