RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 HSD17B11Q8NBQ5 300 aa10.88□□□□□ -0.67
USB1-202ENST00000423271 DEFB131BA0A096LNP1 70 aa10.87□□□□□ -0.67
USB1-202ENST00000423271 H3BTX0 84 aa10.87□□□□□ -0.67
USB1-202ENST00000423271 AMTNQ6UX39 209 aa10.87□□□□□ -0.67
USB1-202ENST00000423271 C1orf158Q8N1D5 194 aa10.87□□□□□ -0.67
USB1-202ENST00000423271 TIMM9Q9Y5J7 89 aa10.87□□□□□ -0.67
USB1-202ENST00000423271 HERC2O95714 4834 aa10.86□□□□□ -0.67
USB1-202ENST00000423271 A0A1B0GVG6 124 aa10.86□□□□□ -0.67
USB1-202ENST00000423271 A8MTW9 85 aa10.86□□□□□ -0.67
USB1-202ENST00000423271 AMBPP02760 352 aa10.86□□□□□ -0.67
USB1-202ENST00000423271 IGLC2P0DOY2 106 aa10.86□□□□□ -0.67
USB1-202ENST00000423271 ATP6V0CP27449 155 aa10.86□□□□□ -0.67
USB1-202ENST00000423271 SLC25A2Q9BXI2 301 aa10.86□□□□□ -0.67
USB1-202ENST00000423271 MRPL32Q9BYC8 188 aaKnown RBP10.86□□□□□ -0.67
USB1-202ENST00000423271 SH3BGRL3Q9H299 93 aa10.86□□□□□ -0.67
USB1-202ENST00000423271 BORCS7-ASMTA0A0B4J1R7 106 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 SMIM9A6NGZ8 99 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 HMSDA8MTL9 139 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 H3BQ15 152 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 SLC17A3O00476 420 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 PYYP10082 97 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 PRB4P10163 310 aaPredicted RBP10.85□□□□□ -0.67
USB1-202ENST00000423271 CNN1P51911 297 aaKnown RBP10.85□□□□□ -0.67
USB1-202ENST00000423271 RAB2AP61019 212 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 ZNF345Q14585 488 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 LCN15Q6UWW0 184 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 TCTE3Q8IZS6 198 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 KCNRGQ8N5I3 272 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 LRRC20Q8TCA0 184 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 FAM167A-AS1Q96KT0 104 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 CYTL1Q9NRR1 136 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 TMEM14CQ9P0S9 112 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 FUT9Q9Y231 359 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 GOLT1BQ9Y3E0 138 aa10.85□□□□□ -0.67
USB1-202ENST00000423271 DYNC1H1Q14204 4646 aaKnown RBP10.85□□□□□ -0.67
USB1-202ENST00000423271 TMEM189A5PLL7 270 aa10.84□□□□□ -0.67
USB1-202ENST00000423271 TAAR5O14804 337 aa10.84□□□□□ -0.67
USB1-202ENST00000423271 EIF3GO75821 320 aaKnown RBP eCLIP10.84□□□□□ -0.67
USB1-202ENST00000423271 SPART-AS1P0CW21 52 aa10.84□□□□□ -0.67
USB1-202ENST00000423271 CXCL2P19875 107 aa10.84□□□□□ -0.67
USB1-202ENST00000423271 ACOT6Q3I5F7 207 aaPredicted RBP10.84□□□□□ -0.67
USB1-202ENST00000423271 FAM222AQ5U5X8 452 aa10.84□□□□□ -0.67
USB1-202ENST00000423271 OR2G3Q8NGZ4 309 aa10.84□□□□□ -0.67
USB1-202ENST00000423271 PSMG3Q9BT73 122 aaPredicted RBP10.84□□□□□ -0.67
USB1-202ENST00000423271 ZNF586Q9NXT0 402 aa10.84□□□□□ -0.67
USB1-202ENST00000423271 PLA2G2EQ9NZK7 142 aa10.84□□□□□ -0.67
USB1-202ENST00000423271 DKK2Q9UBU2 259 aa10.84□□□□□ -0.67
USB1-202ENST00000423271 LOC102723971A0A1B0GUV8 181 aa10.83□□□□□ -0.68
USB1-202ENST00000423271 M0R2Z0 102 aa10.83□□□□□ -0.68
USB1-202ENST00000423271 HBE1P02100 147 aa10.83□□□□□ -0.68
USB1-202ENST00000423271 M6PRP20645 277 aa10.83□□□□□ -0.68
USB1-202ENST00000423271 RHOBP62745 196 aa10.83□□□□□ -0.68
USB1-202ENST00000423271 SPINK13Q1W4C9 94 aa10.83□□□□□ -0.68
USB1-202ENST00000423271 FAM122CQ6P4D5 195 aa10.83□□□□□ -0.68
USB1-202ENST00000423271 AKAP14Q86UN6 197 aa10.83□□□□□ -0.68
USB1-202ENST00000423271 ZNF738Q8NE65 137 aa10.83□□□□□ -0.68
USB1-202ENST00000423271 SAT2Q96F10 170 aaPredicted RBP10.83□□□□□ -0.68
USB1-202ENST00000423271 IGF2BP2-AS1Q96M15 143 aa10.83□□□□□ -0.68
USB1-202ENST00000423271 ARPC5LQ9BPX5 153 aa10.83□□□□□ -0.68
USB1-202ENST00000423271 ZNF331Q9NQX6 463 aaPredicted RBP10.83□□□□□ -0.68
USB1-202ENST00000423271 A0A0D9SG52 128 aa10.82□□□□□ -0.68
USB1-202ENST00000423271 CRXO43186 299 aaPredicted RBP10.82□□□□□ -0.68
USB1-202ENST00000423271 HIST1H1EP10412 219 aaKnown RBP10.82□□□□□ -0.68
USB1-202ENST00000423271 CD300CQ08708 224 aa10.82□□□□□ -0.68
USB1-202ENST00000423271 PSG3Q16557 428 aa10.82□□□□□ -0.68
USB1-202ENST00000423271 OR10G4Q8NGN3 311 aa10.82□□□□□ -0.68
USB1-202ENST00000423271 OR10G9Q8NGN4 311 aa10.82□□□□□ -0.68
USB1-202ENST00000423271 OR10G7Q8NGN6 311 aa10.82□□□□□ -0.68
USB1-202ENST00000423271 GNPNAT1Q96EK6 184 aaPredicted RBP10.82□□□□□ -0.68
USB1-202ENST00000423271 SLC50A1Q9BRV3 221 aa10.82□□□□□ -0.68
USB1-202ENST00000423271 PAXXQ9BUH6 204 aa10.82□□□□□ -0.68
USB1-202ENST00000423271 OR51M1Q9H341 326 aa10.82□□□□□ -0.68
USB1-202ENST00000423271 YTHDF2Q9Y5A9 579 aaKnown RBP10.82□□□□□ -0.68
USB1-202ENST00000423271 PKHD1P08F94 4074 aa10.81□□□□□ -0.68
USB1-202ENST00000423271 TRBV19A0A075B6N1 114 aa10.81□□□□□ -0.68
USB1-202ENST00000423271 BCL2L11O43521 198 aa10.81□□□□□ -0.68
USB1-202ENST00000423271 OR7C2O60412 319 aa10.81□□□□□ -0.68
USB1-202ENST00000423271 DUSP14O95147 198 aaKnown RBP10.81□□□□□ -0.68
USB1-202ENST00000423271 PRM2P04554 102 aa10.81□□□□□ -0.68
USB1-202ENST00000423271 SERF2P84101 59 aa10.81□□□□□ -0.68
USB1-202ENST00000423271 GUK1Q16774 197 aa10.81□□□□□ -0.68
USB1-202ENST00000423271 RRN3P1Q2M238 152 aa10.81□□□□□ -0.68
USB1-202ENST00000423271 BAP18Q8IXM2 172 aa10.81□□□□□ -0.68
USB1-202ENST00000423271 BLNKQ8WV28 456 aa10.81□□□□□ -0.68
USB1-202ENST00000423271 ZNF503Q96F45 646 aa10.81□□□□□ -0.68
USB1-202ENST00000423271 NIPSNAP3BQ9BS92 247 aa10.81□□□□□ -0.68
USB1-202ENST00000423271 TMEM208Q9BTX3 173 aa10.81□□□□□ -0.68
USB1-202ENST00000423271 NDUFAF3Q9BU61 184 aa10.81□□□□□ -0.68
USB1-202ENST00000423271 DNAH11Q96DT5 4516 aa10.81□□□□□ -0.68
USB1-202ENST00000423271 TRAV12-2A0A075B6T6 113 aa10.8□□□□□ -0.68
USB1-202ENST00000423271 NDUFB4O95168 129 aa10.8□□□□□ -0.68
USB1-202ENST00000423271 INSP01308 110 aa10.8□□□□□ -0.68
USB1-202ENST00000423271 C1QBP02746 253 aa10.8□□□□□ -0.68
USB1-202ENST00000423271 OR10J4P0C629 311 aa10.8□□□□□ -0.68
USB1-202ENST00000423271 HIST1H1AQ02539 215 aaPredicted RBP10.8□□□□□ -0.68
USB1-202ENST00000423271 KHDC3LQ587J8 217 aa10.8□□□□□ -0.68
USB1-202ENST00000423271 TMUB2Q71RG4 321 aa10.8□□□□□ -0.68
USB1-202ENST00000423271 OR8A1Q8NGG7 326 aa10.8□□□□□ -0.68
USB1-202ENST00000423271 FXYD5Q96DB9 178 aa10.8□□□□□ -0.68
USB1-202ENST00000423271 KIAA1109Q2LD37 5005 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms